RNA–Protein interactions for RNA: ENSMUST00000098948.9

Smarca4-202, Transcript of Transcription activator BRG1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca4, Length 6,376 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca4-202ENSMUST00000098948 Anks4bQ8K3X6 423 aa24,52■■□□□ 1,52
Smarca4-202ENSMUST00000098948 Synj1Q8CHC4 1574 aa24,47■■□□□ 1,51
Smarca4-202ENSMUST00000098948 Atp1b4Q99ME6 356 aa24,47■■□□□ 1,51
Smarca4-202ENSMUST00000098948 Chic2Q9D9G3 165 aa24,41■■□□□ 1,5
Smarca4-202ENSMUST00000098948 Gm13695A2AK44 830 aa24,41■■□□□ 1,5
Smarca4-202ENSMUST00000098948 Ccer2J3QPU5 274 aa24,39■■□□□ 1,5
Smarca4-202ENSMUST00000098948 Eea1Q8BL66 1411 aa24,39■■□□□ 1,5
Smarca4-202ENSMUST00000098948 Iqgap2Q3UQ44 1575 aa24,39■■□□□ 1,5
Smarca4-202ENSMUST00000098948 Zbtb4Q5F293 982 aa24,38■■□□□ 1,49
Smarca4-202ENSMUST00000098948 Cttnbp2B9EJA2 1648 aa24,36■■□□□ 1,49
Smarca4-202ENSMUST00000098948 Ccdc88bQ4QRL3 1481 aa24,33■■□□□ 1,49
Smarca4-202ENSMUST00000098948 Safb2Q80YR5 991 aaKnown RBP24,31■■□□□ 1,48
Smarca4-202ENSMUST00000098948 Clstn2Q9ER65 966 aa24,31■■□□□ 1,48
Smarca4-202ENSMUST00000098948 Aplp2Q06335 707 aa24,22■■□□□ 1,47
Smarca4-202ENSMUST00000098948 4930567H17RikQ3V0K5 233 aa24,2■■□□□ 1,46
Smarca4-202ENSMUST00000098948 AknaQ80VW7 1404 aa24,17■■□□□ 1,46
Smarca4-202ENSMUST00000098948 Nlrp6Q91WS2 869 aa24,16■■□□□ 1,46
Smarca4-202ENSMUST00000098948 DaxxO35613 739 aa24,11■■□□□ 1,45
Smarca4-202ENSMUST00000098948 LrpprcQ6PB66 1392 aaKnown RBP24,1■■□□□ 1,45
Smarca4-202ENSMUST00000098948 Baz1bQ9Z277 1479 aa24,09■■□□□ 1,45
Smarca4-202ENSMUST00000098948 DiexfQ8BTT6 772 aaKnown RBP24,09■■□□□ 1,45
Smarca4-202ENSMUST00000098948 Cep162Q6ZQ06 1403 aa24,08■■□□□ 1,45
Smarca4-202ENSMUST00000098948 Calr4Q3TQS0 420 aa24,08■■□□□ 1,45
Smarca4-202ENSMUST00000098948 Prdm10Q3UTQ7 1184 aa24,06■■□□□ 1,44
Smarca4-202ENSMUST00000098948 Rpap1Q80TE0 1409 aa24,06■■□□□ 1,44
Smarca4-202ENSMUST00000098948 Kif27Q7M6Z4 1394 aa24,04■■□□□ 1,44
Smarca4-202ENSMUST00000098948 Ppp1r18Q8BQ30 594 aa24,03■■□□□ 1,44
Smarca4-202ENSMUST00000098948 Dhx29Q6PGC1 1365 aaKnown RBP24,02■■□□□ 1,44
Smarca4-202ENSMUST00000098948 Polr3glQ8R0C0 218 aa24,01■■□□□ 1,43
Smarca4-202ENSMUST00000098948 Ppp4r2Q0VGB7 417 aa24■■□□□ 1,43
Smarca4-202ENSMUST00000098948 Aebp2Q9Z248 504 aaKnown RBP24■■□□□ 1,43
Smarca4-202ENSMUST00000098948 Aebp1Q640N1 1128 aa23,95■■□□□ 1,42
Smarca4-202ENSMUST00000098948 Mtus2Q3UHD3 1353 aa23,95■■□□□ 1,42
Smarca4-202ENSMUST00000098948 BicraF8VPZ9 1578 aa23,94■■□□□ 1,42
Smarca4-202ENSMUST00000098948 Rrp7aQ9D1C9 280 aaKnown RBP23,92■■□□□ 1,42
Smarca4-202ENSMUST00000098948 ArxO35085 564 aa23,9■■□□□ 1,42
Smarca4-202ENSMUST00000098948 Arid3cA6PWV5 409 aa23,89■■□□□ 1,41
Smarca4-202ENSMUST00000098948 Carmil1Q6EDY6 1374 aa23,89■■□□□ 1,41
Smarca4-202ENSMUST00000098948 P3h3Q8CG70 732 aa23,87■■□□□ 1,41
Smarca4-202ENSMUST00000098948 Mrs2Q5NCE8 434 aa23,83■■□□□ 1,4
Smarca4-202ENSMUST00000098948 Rad21Q61550 635 aaKnown RBP23,8■■□□□ 1,4
Smarca4-202ENSMUST00000098948 Pabpn1Q8CCS6 302 aaKnown RBP23,79■■□□□ 1,4
Smarca4-202ENSMUST00000098948 Frmpd1A2AKB4 1549 aa23,79■■□□□ 1,4
Smarca4-202ENSMUST00000098948 Wdr43Q6ZQL4 677 aaKnown RBP23,78■■□□□ 1,4
Smarca4-202ENSMUST00000098948 1700123L14RikQ3V2K7 440 aa23,76■■□□□ 1,39
Smarca4-202ENSMUST00000098948 Rapgef2Q8CHG7 1496 aa23,75■■□□□ 1,39
Smarca4-202ENSMUST00000098948 Mrc2Q64449 1479 aa23,74■■□□□ 1,39
Smarca4-202ENSMUST00000098948 Rgl3Q3UYI5 709 aa23,74■■□□□ 1,39
Smarca4-202ENSMUST00000098948 CntlnA2AM05 1397 aa23,73■■□□□ 1,39
Smarca4-202ENSMUST00000098948 MyclP10166 368 aa23,73■■□□□ 1,39
Smarca4-202ENSMUST00000098948 Mia2Q91ZV0 1396 aa23,7■■□□□ 1,39
Smarca4-202ENSMUST00000098948 Dhx57Q6P5D3 1388 aaKnown RBP23,7■■□□□ 1,38
Smarca4-202ENSMUST00000098948 Upf2A2AT37 1269 aaKnown RBP23,69■■□□□ 1,38
Smarca4-202ENSMUST00000098948 Lemd3Q9WU40 921 aa23,66■■□□□ 1,38
Smarca4-202ENSMUST00000098948 Fyco1Q8VDC1 1437 aa23,65■■□□□ 1,38
Smarca4-202ENSMUST00000098948 Urb2E9Q7L1 1524 aaKnown RBP23,64■■□□□ 1,38
Smarca4-202ENSMUST00000098948 Mroh3A0A1D5RM54 893 aa23,64■■□□□ 1,37
Smarca4-202ENSMUST00000098948 Efcab5A0JP43 1406 aa23,63■■□□□ 1,37
Smarca4-202ENSMUST00000098948 Rangap1P46061 589 aaKnown RBP23,62■■□□□ 1,37
Smarca4-202ENSMUST00000098948 Cc2d2aQ8CFW7 1633 aa23,62■■□□□ 1,37
Smarca4-202ENSMUST00000098948 Fam71e1A1L3C1 212 aa23,6■■□□□ 1,37
Smarca4-202ENSMUST00000098948 Wdr62Q3U3T8 1523 aa23,6■■□□□ 1,37
Smarca4-202ENSMUST00000098948 Srpk2O54781 681 aaKnown RBP23,57■■□□□ 1,36
Smarca4-202ENSMUST00000098948 Kdm2aP59997 1161 aa23,57■■□□□ 1,36
Smarca4-202ENSMUST00000098948 IqubQ8CDK3 788 aa23,57■■□□□ 1,36
Smarca4-202ENSMUST00000098948 Stk24Q99KH8 431 aa23,55■■□□□ 1,36
Smarca4-202ENSMUST00000098948 Soga1E1U8D0 1418 aa23,55■■□□□ 1,36
Smarca4-202ENSMUST00000098948 WrnO09053 1401 aa23,53■■□□□ 1,36
Smarca4-202ENSMUST00000098948 Shroom4Q1W617 1475 aa23,52■■□□□ 1,36
Smarca4-202ENSMUST00000098948 Grwd1Q810D6 446 aaKnown RBP23,52■■□□□ 1,36
Smarca4-202ENSMUST00000098948 Duox2A2AQ99 1517 aa23,51■■□□□ 1,35
Smarca4-202ENSMUST00000098948 Map4P27546 1125 aaKnown RBP23,5■■□□□ 1,35
Smarca4-202ENSMUST00000098948 Gm20521D3Z5F7 333 aa23,49■■□□□ 1,35
Smarca4-202ENSMUST00000098948 Jph4Q80WT0 628 aa23,47■■□□□ 1,35
Smarca4-202ENSMUST00000098948 Rad54l2Q99NG0 1466 aa23,46■■□□□ 1,35
Smarca4-202ENSMUST00000098948 Cabp1Q9JLK7 227 aa23,45■■□□□ 1,34
Smarca4-202ENSMUST00000098948 Hsp90aa1P07901 733 aaKnown RBP23,45■■□□□ 1,34
Smarca4-202ENSMUST00000098948 Arhgap35Q91YM2 1499 aa23,44■■□□□ 1,34
Smarca4-202ENSMUST00000098948 Ofd1Q80Z25 1017 aa23,44■■□□□ 1,34
Smarca4-202ENSMUST00000098948 Top2aQ01320 1528 aaKnown RBP23,43■■□□□ 1,34
Smarca4-202ENSMUST00000098948 PogzQ8BZH4 1409 aaKnown RBP23,43■■□□□ 1,34
Smarca4-202ENSMUST00000098948 NrkQ9R0G8 1455 aa23,4■■□□□ 1,34
Smarca4-202ENSMUST00000098948 Polr1aO35134 1717 aaKnown RBP23,38■■□□□ 1,33
Smarca4-202ENSMUST00000098948 Card11Q8CIS0 1159 aa23,38■■□□□ 1,33
Smarca4-202ENSMUST00000098948 Grin2bQ01097 1482 aa23,37■■□□□ 1,33
Smarca4-202ENSMUST00000098948 Ncoa2Q61026 1462 aa23,36■■□□□ 1,33
Smarca4-202ENSMUST00000098948 Dnajc5bQ9CQ94 199 aa23,36■■□□□ 1,33
Smarca4-202ENSMUST00000098948 Ccnb3Q810T2 1396 aa23,35■■□□□ 1,33
Smarca4-202ENSMUST00000098948 Plekhh2Q8C115 1491 aa23,35■■□□□ 1,33
Smarca4-202ENSMUST00000098948 MlecQ6ZQI3 291 aaKnown RBP23,34■■□□□ 1,33
Smarca4-202ENSMUST00000098948 Trim26Q99PN3 545 aa23,34■■□□□ 1,33
Smarca4-202ENSMUST00000098948 Sart1Q9Z315 806 aaKnown RBP23,33■■□□□ 1,33
Smarca4-202ENSMUST00000098948 SafbD3YXK2 937 aaKnown RBP23,31■■□□□ 1,32
Smarca4-202ENSMUST00000098948 Exosc9Q9JHI7 438 aaKnown RBP23,31■■□□□ 1,32
Smarca4-202ENSMUST00000098948 Kif3bQ61771 747 aa23,31■■□□□ 1,32
Smarca4-202ENSMUST00000098948 Ift140E9PY46 1464 aa23,31■■□□□ 1,32
Smarca4-202ENSMUST00000098948 Stag3O70576 1240 aa23,3■■□□□ 1,32
Smarca4-202ENSMUST00000098948 Rsph4aQ8BYM7 716 aa23,3■■□□□ 1,32
Smarca4-202ENSMUST00000098948 Pkd2O35245 966 aa23,29■■□□□ 1,32
Smarca4-202ENSMUST00000098948 Fgd6Q69ZL1 1399 aa23,28■■□□□ 1,32
Retrieved 100 of 22,080 RNA–protein pairs in 38,5 ms