RNA–Protein interactions for RNA: ENSMUST00000088356.9

Usf3-201, Transcript of Gene model 608, (NCBI), mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Usf3, Length 757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3-201ENSMUST00000088356 Ythdc2B2RR83 1445 aaKnown RBP31.03■■■□□ 2.56
Usf3-201ENSMUST00000088356 Chd1P40201 1711 aa31■■■□□ 2.55
Usf3-201ENSMUST00000088356 Top2aQ01320 1528 aaKnown RBP30.89■■■□□ 2.54
Usf3-201ENSMUST00000088356 Setbp1Q9Z180 1582 aa30.88■■■□□ 2.53
Usf3-201ENSMUST00000088356 Pla2r1Q62028 1487 aa30.85■■■□□ 2.53
Usf3-201ENSMUST00000088356 CadpsQ80TJ1 1355 aa30.84■■■□□ 2.53
Usf3-201ENSMUST00000088356 Gpatch8A2A6A1 1505 aa30.83■■■□□ 2.53
Usf3-201ENSMUST00000088356 Dnmt1P13864 1620 aaKnown RBP30.76■■■□□ 2.52
Usf3-201ENSMUST00000088356 Soga1E1U8D0 1418 aa30.75■■■□□ 2.51
Usf3-201ENSMUST00000088356 Ak9G3UYQ4 1894 aa30.75■■■□□ 2.51
Usf3-201ENSMUST00000088356 Ppp1r18Q8BQ30 594 aa30.74■■■□□ 2.51
Usf3-201ENSMUST00000088356 Plekhg3Q4VAC9 1341 aa30.7■■■□□ 2.5
Usf3-201ENSMUST00000088356 BC005561E9Q5E2 1589 aa30.69■■■□□ 2.5
Usf3-201ENSMUST00000088356 Neo1P97798 1493 aa30.69■■■□□ 2.5
Usf3-201ENSMUST00000088356 SynmQ70IV5 1561 aa30.68■■■□□ 2.5
Usf3-201ENSMUST00000088356 NrkQ9R0G8 1455 aa30.65■■■□□ 2.5
Usf3-201ENSMUST00000088356 Abcc2Q8VI47 1543 aa30.63■■■□□ 2.49
Usf3-201ENSMUST00000088356 Abca16E9PWJ7 1678 aa30.61■■■□□ 2.49
Usf3-201ENSMUST00000088356 Map3k4O08648 1597 aa30.59■■■□□ 2.49
Usf3-201ENSMUST00000088356 AI481877A2ALV5 1481 aa30.59■■■□□ 2.49
Usf3-201ENSMUST00000088356 Gm14025A2AP89 1413 aa30.57■■■□□ 2.48
Usf3-201ENSMUST00000088356 Arhgap27A2AB59 869 aa30.54■■■□□ 2.48
Usf3-201ENSMUST00000088356 Shroom4Q1W617 1475 aa30.53■■■□□ 2.48
Usf3-201ENSMUST00000088356 EprsQ8CGC7 1512 aaKnown RBP30.52■■■□□ 2.48
Usf3-201ENSMUST00000088356 PxdnQ3UQ28 1475 aa30.51■■■□□ 2.48
Usf3-201ENSMUST00000088356 TchhA0A0B4J1F9 1599 aa30.5■■■□□ 2.47
Usf3-201ENSMUST00000088356 WizO88286 1684 aaKnown RBP30.5■■■□□ 2.47
Usf3-201ENSMUST00000088356 Arhgef12Q8R4H2 1543 aaKnown RBP30.47■■■□□ 2.47
Usf3-201ENSMUST00000088356 Ccdc88bQ4QRL3 1481 aa30.46■■■□□ 2.47
Usf3-201ENSMUST00000088356 Ifnlr1Q8CGK5 535 aa30.46■■■□□ 2.47
Usf3-201ENSMUST00000088356 AdgbG3UZ78 1657 aa30.44■■■□□ 2.46
Usf3-201ENSMUST00000088356 Ttc37F8VPK0 1563 aa30.4■■■□□ 2.46
Usf3-201ENSMUST00000088356 Eif4g1Q6NZJ6 1600 aaKnown RBP30.4■■■□□ 2.46
Usf3-201ENSMUST00000088356 Clasp1Q80TV8 1535 aaKnown RBP30.39■■■□□ 2.46
Usf3-201ENSMUST00000088356 Adamts12Q811B3 1600 aa30.36■■■□□ 2.45
Usf3-201ENSMUST00000088356 Mapkbp1Q6NS57 1503 aa30.35■■■□□ 2.45
Usf3-201ENSMUST00000088356 Zeb1Q64318 1117 aa30.34■■■□□ 2.45
Usf3-201ENSMUST00000088356 Alpk3Q924C5 1678 aa30.33■■■□□ 2.45
Usf3-201ENSMUST00000088356 Slx4Q6P1D7 1565 aa30.33■■■□□ 2.45
Usf3-201ENSMUST00000088356 Arhgef11Q68FM7 1552 aa30.3■■■□□ 2.44
Usf3-201ENSMUST00000088356 Depdc5P61460 1591 aa30.24■■■□□ 2.43
Usf3-201ENSMUST00000088356 Plppr3Q7TPB0 716 aa30.18■■■□□ 2.42
Usf3-201ENSMUST00000088356 Arid3cA6PWV5 409 aa30.17■■■□□ 2.42
Usf3-201ENSMUST00000088356 Jph4Q80WT0 628 aa30.15■■■□□ 2.42
Usf3-201ENSMUST00000088356 Fkbp15Q6P9Q6 1216 aaKnown RBP30.13■■■□□ 2.41
Usf3-201ENSMUST00000088356 Lrrc9Q8CDN9 1456 aa30.12■■■□□ 2.41
Usf3-201ENSMUST00000088356 Rpap1Q80TE0 1409 aa30.1■■■□□ 2.41
Usf3-201ENSMUST00000088356 Fndc1E9Q043 1732 aa30.09■■■□□ 2.41
Usf3-201ENSMUST00000088356 Zfyve16Q80U44 1528 aa30.07■■■□□ 2.4
Usf3-201ENSMUST00000088356 Dnajc5gQ8C632 165 aa30.06■■■□□ 2.4
Usf3-201ENSMUST00000088356 Mroh2bQ7M6Y6 1581 aa30.05■■■□□ 2.4
Usf3-201ENSMUST00000088356 Znf608Q56A10 1511 aa30.05■■■□□ 2.4
Usf3-201ENSMUST00000088356 Chic1Q8CBW7 227 aa30.03■■■□□ 2.4
Usf3-201ENSMUST00000088356 Abca5Q8K448 1642 aa30■■■□□ 2.39
Usf3-201ENSMUST00000088356 Gm7298A0A0N4SVU1 1476 aa29.98■■■□□ 2.39
Usf3-201ENSMUST00000088356 Igf1rQ60751 1373 aa29.93■■■□□ 2.38
Usf3-201ENSMUST00000088356 Kdm5bQ80Y84 1544 aa29.92■■■□□ 2.38
Usf3-201ENSMUST00000088356 Rrbp1Q99PL5 1605 aaKnown RBP29.9■■■□□ 2.38
Usf3-201ENSMUST00000088356 MlecQ6ZQI3 291 aaKnown RBP29.89■■■□□ 2.38
Usf3-201ENSMUST00000088356 Wdr7Q920I9 1489 aa29.88■■■□□ 2.37
Usf3-201ENSMUST00000088356 Carmil1Q6EDY6 1374 aa29.84■■■□□ 2.37
Usf3-201ENSMUST00000088356 WrnO09053 1401 aa29.83■■■□□ 2.37
Usf3-201ENSMUST00000088356 Cyb5rlB1AS42 316 aa29.8■■■□□ 2.36
Usf3-201ENSMUST00000088356 Npm2Q80W85 207 aa29.8■■■□□ 2.36
Usf3-201ENSMUST00000088356 Map3k1P53349 1493 aa29.8■■■□□ 2.36
Usf3-201ENSMUST00000088356 Cul7Q8VE73 1689 aa29.79■■■□□ 2.36
Usf3-201ENSMUST00000088356 Brwd3A2AHJ4 1799 aa29.77■■■□□ 2.36
Usf3-201ENSMUST00000088356 NhsB1AV60 1647 aa29.75■■■□□ 2.35
Usf3-201ENSMUST00000088356 AglF8VPN4 1532 aa29.75■■■□□ 2.35
Usf3-201ENSMUST00000088356 Rnf17Q99MV7 1640 aa29.69■■■□□ 2.34
Usf3-201ENSMUST00000088356 Kdm6bQ5NCY0 1641 aa29.68■■■□□ 2.34
Usf3-201ENSMUST00000088356 Ercc6l2Q9JIM3 1537 aa29.66■■■□□ 2.34
Usf3-201ENSMUST00000088356 Polr1aO35134 1717 aaKnown RBP29.66■■■□□ 2.34
Usf3-201ENSMUST00000088356 Atp10dQ8K2X1 1416 aa29.65■■■□□ 2.34
Usf3-201ENSMUST00000088356 Hecw2Q6I6G8 1578 aa29.6■■■□□ 2.33
Usf3-201ENSMUST00000088356 Arhgap31A6X8Z5 1425 aa29.57■■■□□ 2.32
Usf3-201ENSMUST00000088356 Arhgap35Q91YM2 1499 aa29.56■■■□□ 2.32
Usf3-201ENSMUST00000088356 Cux1P53564 1515 aa29.55■■■□□ 2.32
Usf3-201ENSMUST00000088356 Ccdc141E9Q8Q6 1531 aa29.55■■■□□ 2.32
Usf3-201ENSMUST00000088356 Gcc2Q8CHG3 1679 aa29.47■■■□□ 2.31
Usf3-201ENSMUST00000088356 Naip2Q9QUK4 1447 aa29.46■■■□□ 2.31
Usf3-201ENSMUST00000088356 A2mQ6GQT1 1474 aa29.46■■■□□ 2.31
Usf3-201ENSMUST00000088356 Mroh2aD3Z750 1679 aa29.45■■■□□ 2.31
Usf3-201ENSMUST00000088356 Abca8bQ8K440 1620 aa29.41■■■□□ 2.3
Usf3-201ENSMUST00000088356 Kiaa1210E9Q0C6 1637 aa29.34■■■□□ 2.29
Usf3-201ENSMUST00000088356 Fyco1Q8VDC1 1437 aa29.34■■■□□ 2.29
Usf3-201ENSMUST00000088356 Qser1A2BIE1 1698 aa29.31■■■□□ 2.28
Usf3-201ENSMUST00000088356 Clip1Q922J3 1391 aa29.3■■■□□ 2.28
Usf3-201ENSMUST00000088356 Fancd2Q80V62 1450 aa29.29■■■□□ 2.28
Usf3-201ENSMUST00000088356 Kif14L0N7N1 1674 aaKnown RBP29.25■■■□□ 2.27
Usf3-201ENSMUST00000088356 Fbxo41Q6NS60 873 aa29.23■■■□□ 2.27
Usf3-201ENSMUST00000088356 Rapgef6Q5NCJ1 1609 aa29.21■■■□□ 2.27
Usf3-201ENSMUST00000088356 PtprmP28828 1452 aa29.21■■■□□ 2.27
Usf3-201ENSMUST00000088356 Ncoa2Q61026 1462 aa29.19■■■□□ 2.26
Usf3-201ENSMUST00000088356 BlmO88700 1416 aa29.19■■■□□ 2.26
Usf3-201ENSMUST00000088356 Mlh3A0A1Y7VMP7 1443 aa29.16■■■□□ 2.26
Usf3-201ENSMUST00000088356 Synj2Q9D2G5 1434 aa29.16■■■□□ 2.26
Usf3-201ENSMUST00000088356 Abca9Q8K449 1623 aa29.15■■■□□ 2.26
Usf3-201ENSMUST00000088356 Adamtsl3G3UXC7 1706 aa29.14■■■□□ 2.26
Usf3-201ENSMUST00000088356 Arap1Q4LDD4 1452 aa29.14■■■□□ 2.26
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms