RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Tnnt3Q9QZ47 272 aa16.49■□□□□ 0.23
Col9a1-202ENSMUST00000088349 Fam71e1A1L3C1 212 aa16.48■□□□□ 0.23
Col9a1-202ENSMUST00000088349 TnnQ80Z71 1560 aa16.47■□□□□ 0.23
Col9a1-202ENSMUST00000088349 Myt1Q8CFC2 1127 aa16.47■□□□□ 0.23
Col9a1-202ENSMUST00000088349 Thoc2B1AZI6 1594 aaKnown RBP16.47■□□□□ 0.23
Col9a1-202ENSMUST00000088349 Baz1bQ9Z277 1479 aa16.47■□□□□ 0.23
Col9a1-202ENSMUST00000088349 AqrQ8CFQ3 1481 aaKnown RBP16.44■□□□□ 0.22
Col9a1-202ENSMUST00000088349 Arhgef5E9Q7D5 1581 aa16.44■□□□□ 0.22
Col9a1-202ENSMUST00000088349 Unc13aQ4KUS2 1712 aa16.44■□□□□ 0.22
Col9a1-202ENSMUST00000088349 Ccdc18Q640L5 1455 aa16.44■□□□□ 0.22
Col9a1-202ENSMUST00000088349 Shroom4Q1W617 1475 aa16.42■□□□□ 0.22
Col9a1-202ENSMUST00000088349 Kdm5bQ80Y84 1544 aa16.41■□□□□ 0.22
Col9a1-202ENSMUST00000088349 NrkQ9R0G8 1455 aa16.41■□□□□ 0.22
Col9a1-202ENSMUST00000088349 Lamc3Q9R0B6 1581 aa16.4■□□□□ 0.22
Col9a1-202ENSMUST00000088349 Slc24a1Q91WD8 1130 aa16.39■□□□□ 0.22
Col9a1-202ENSMUST00000088349 Chic2Q9D9G3 165 aa16.39■□□□□ 0.22
Col9a1-202ENSMUST00000088349 Camsap1A2AHC3 1581 aa16.38■□□□□ 0.21
Col9a1-202ENSMUST00000088349 Hspa5P20029 655 aaKnown RBP16.37■□□□□ 0.21
Col9a1-202ENSMUST00000088349 Rpap1Q80TE0 1409 aa16.35■□□□□ 0.21
Col9a1-202ENSMUST00000088349 Grin2bQ01097 1482 aa16.34■□□□□ 0.21
Col9a1-202ENSMUST00000088349 Naip1Q9QWK5 1403 aa16.34■□□□□ 0.21
Col9a1-202ENSMUST00000088349 Tiam1Q60610 1591 aa16.32■□□□□ 0.2
Col9a1-202ENSMUST00000088349 Stra8P70278 393 aa16.31■□□□□ 0.2
Col9a1-202ENSMUST00000088349 Znf710Q3U288 666 aa16.31■□□□□ 0.2
Col9a1-202ENSMUST00000088349 Mroh2bQ7M6Y6 1581 aa16.3■□□□□ 0.2
Col9a1-202ENSMUST00000088349 Aebp1Q640N1 1128 aa16.25■□□□□ 0.19
Col9a1-202ENSMUST00000088349 Sin3aQ60520 1274 aaKnown RBP16.25■□□□□ 0.19
Col9a1-202ENSMUST00000088349 LrpprcQ6PB66 1392 aaKnown RBP16.25■□□□□ 0.19
Col9a1-202ENSMUST00000088349 Map3k1P53349 1493 aa16.25■□□□□ 0.19
Col9a1-202ENSMUST00000088349 Fam135aQ6NS59 1506 aa16.24■□□□□ 0.19
Col9a1-202ENSMUST00000088349 Slx4Q6P1D7 1565 aa16.23■□□□□ 0.19
Col9a1-202ENSMUST00000088349 Rad54l2Q99NG0 1466 aa16.23■□□□□ 0.19
Col9a1-202ENSMUST00000088349 Cux1P53564 1515 aa16.22■□□□□ 0.19
Col9a1-202ENSMUST00000088349 Anp32aO35381 247 aa16.21■□□□□ 0.19
Col9a1-202ENSMUST00000088349 Ankrd26Q811D2 1581 aa16.21■□□□□ 0.19
Col9a1-202ENSMUST00000088349 Pcf11G3X9Z4 1553 aa16.21■□□□□ 0.18
Col9a1-202ENSMUST00000088349 Dhx29Q6PGC1 1365 aaKnown RBP16.2■□□□□ 0.18
Col9a1-202ENSMUST00000088349 Gm13697A2AK42 830 aa16.2■□□□□ 0.18
Col9a1-202ENSMUST00000088349 Calr4Q3TQS0 420 aa16.2■□□□□ 0.18
Col9a1-202ENSMUST00000088349 TchhA0A0B4J1F9 1599 aa16.19■□□□□ 0.18
Col9a1-202ENSMUST00000088349 3425401B19RikD3Z1D3 1412 aa16.18■□□□□ 0.18
Col9a1-202ENSMUST00000088349 Duox2A2AQ99 1517 aa16.18■□□□□ 0.18
Col9a1-202ENSMUST00000088349 Eif5bQ05D44 1216 aaKnown RBP16.16■□□□□ 0.18
Col9a1-202ENSMUST00000088349 Carmil1Q6EDY6 1374 aa16.16■□□□□ 0.18
Col9a1-202ENSMUST00000088349 Nolc1E9Q5C9 702 aaKnown RBP16.14■□□□□ 0.17
Col9a1-202ENSMUST00000088349 CntlnA2AM05 1397 aa16.13■□□□□ 0.17
Col9a1-202ENSMUST00000088349 Ccer2J3QPU5 274 aa16.13■□□□□ 0.17
Col9a1-202ENSMUST00000088349 Mrc2Q64449 1479 aa16.12■□□□□ 0.17
Col9a1-202ENSMUST00000088349 UacaQ8CGB3 1411 aa16.12■□□□□ 0.17
Col9a1-202ENSMUST00000088349 DiexfQ8BTT6 772 aaKnown RBP16.11■□□□□ 0.17
Col9a1-202ENSMUST00000088349 PogzQ8BZH4 1409 aaKnown RBP16.1■□□□□ 0.17
Col9a1-202ENSMUST00000088349 Mia2Q91ZV0 1396 aa16.1■□□□□ 0.17
Col9a1-202ENSMUST00000088349 Efcab5A0JP43 1406 aa16.1■□□□□ 0.17
Col9a1-202ENSMUST00000088349 Fyco1Q8VDC1 1437 aa16.1■□□□□ 0.17
Col9a1-202ENSMUST00000088349 Fhad1A6PWD2 1420 aa16.08■□□□□ 0.17
Col9a1-202ENSMUST00000088349 Erich3F6QRE9 1637 aa16.08■□□□□ 0.16
Col9a1-202ENSMUST00000088349 Zbtb7cQ8VCZ7 619 aa16.06■□□□□ 0.16
Col9a1-202ENSMUST00000088349 Ankrd36D3Z4K0 1415 aa16.05■□□□□ 0.16
Col9a1-202ENSMUST00000088349 Fkbp15Q6P9Q6 1216 aaKnown RBP16.05■□□□□ 0.16
Col9a1-202ENSMUST00000088349 Smg6P61406 1418 aaKnown RBP16.04■□□□□ 0.16
Col9a1-202ENSMUST00000088349 Ccnb3Q810T2 1396 aa16.03■□□□□ 0.16
Col9a1-202ENSMUST00000088349 Vps8Q0P5W1 1427 aa16.02■□□□□ 0.16
Col9a1-202ENSMUST00000088349 Samd9lQ69Z37 1561 aa16.02■□□□□ 0.15
Col9a1-202ENSMUST00000088349 Ppp4r2Q0VGB7 417 aa16.02■□□□□ 0.15
Col9a1-202ENSMUST00000088349 Zfp644E9QA22 1323 aa16.02■□□□□ 0.15
Col9a1-202ENSMUST00000088349 P3h3Q8CG70 732 aa16.01■□□□□ 0.15
Col9a1-202ENSMUST00000088349 Kif21aQ9QXL2 1672 aa16■□□□□ 0.15
Col9a1-202ENSMUST00000088349 Mrs2Q5NCE8 434 aa16■□□□□ 0.15
Col9a1-202ENSMUST00000088349 Naip2Q9QUK4 1447 aa16■□□□□ 0.15
Col9a1-202ENSMUST00000088349 Gm7298A0A0N4SVU1 1476 aa15.99■□□□□ 0.15
Col9a1-202ENSMUST00000088349 Cabp1Q9JLK7 227 aa15.99■□□□□ 0.15
Col9a1-202ENSMUST00000088349 Lmo7E9PYF4 1699 aaKnown RBP15.99■□□□□ 0.15
Col9a1-202ENSMUST00000088349 Plb1Q3TTY0 1478 aa15.99■□□□□ 0.15
Col9a1-202ENSMUST00000088349 Urb2E9Q7L1 1524 aaKnown RBP15.98■□□□□ 0.15
Col9a1-202ENSMUST00000088349 Bcl11aQ9QYE3 773 aa15.98■□□□□ 0.15
Col9a1-202ENSMUST00000088349 Arhgap27A2AB59 869 aa15.97■□□□□ 0.15
Col9a1-202ENSMUST00000088349 Kif27Q7M6Z4 1394 aa15.97■□□□□ 0.15
Col9a1-202ENSMUST00000088349 Gm1043A0A140LJC2 1431 aa15.96■□□□□ 0.14
Col9a1-202ENSMUST00000088349 A2mQ6GQT1 1474 aa15.95■□□□□ 0.14
Col9a1-202ENSMUST00000088349 Wwc2Q6NXJ0 1187 aa15.95■□□□□ 0.14
Col9a1-202ENSMUST00000088349 Supt16hQ920B9 1047 aa15.95■□□□□ 0.14
Col9a1-202ENSMUST00000088349 Zbtb4Q5F293 982 aa15.94■□□□□ 0.14
Col9a1-202ENSMUST00000088349 SynmQ70IV5 1561 aa15.94■□□□□ 0.14
Col9a1-202ENSMUST00000088349 Naip5Q9R016 1403 aa15.93■□□□□ 0.14
Col9a1-202ENSMUST00000088349 Wdr43Q6ZQL4 677 aaKnown RBP15.93■□□□□ 0.14
Col9a1-202ENSMUST00000088349 Crocc2F6XLV1 1638 aa15.92■□□□□ 0.14
Col9a1-202ENSMUST00000088349 Mphosph9A6H5Y1 991 aa15.92■□□□□ 0.14
Col9a1-202ENSMUST00000088349 NrdcQ8BHG1 1161 aa15.92■□□□□ 0.14
Col9a1-202ENSMUST00000088349 EprsQ8CGC7 1512 aaKnown RBP15.9■□□□□ 0.14
Col9a1-202ENSMUST00000088349 Ifnlr1Q8CGK5 535 aa15.89■□□□□ 0.13
Col9a1-202ENSMUST00000088349 CadpsQ80TJ1 1355 aa15.89■□□□□ 0.13
Col9a1-202ENSMUST00000088349 Exoc6Q8R313 802 aa15.87■□□□□ 0.13
Col9a1-202ENSMUST00000088349 Pelp1Q9DBD5 1123 aaKnown RBP15.87■□□□□ 0.13
Col9a1-202ENSMUST00000088349 Slc4a2P13808 1237 aaKnown RBP15.86■□□□□ 0.13
Col9a1-202ENSMUST00000088349 Ncoa2Q61026 1462 aa15.86■□□□□ 0.13
Col9a1-202ENSMUST00000088349 Pkd2O35245 966 aa15.84■□□□□ 0.13
Col9a1-202ENSMUST00000088349 Gpatch8A2A6A1 1505 aa15.84■□□□□ 0.13
Col9a1-202ENSMUST00000088349 Dennd4bQ3U1Y4 1499 aa15.84■□□□□ 0.13
Col9a1-202ENSMUST00000088349 WrnO09053 1401 aa15.84■□□□□ 0.13
Col9a1-202ENSMUST00000088349 Rgl3Q3UYI5 709 aa15.84■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms