RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 AknaQ80VW7 1404 aa19.54■□□□□ 0.72
Ccdc60-202ENSMUST00000086483 Rad54l2Q99NG0 1466 aa19.52■□□□□ 0.72
Ccdc60-202ENSMUST00000086483 Setbp1Q9Z180 1582 aa19.52■□□□□ 0.72
Ccdc60-202ENSMUST00000086483 Cngb1E1AZ71 1325 aa19.51■□□□□ 0.71
Ccdc60-202ENSMUST00000086483 Chd1P40201 1711 aa19.48■□□□□ 0.71
Ccdc60-202ENSMUST00000086483 Plekhg3Q4VAC9 1341 aa19.46■□□□□ 0.71
Ccdc60-202ENSMUST00000086483 Top2aQ01320 1528 aaKnown RBP19.42■□□□□ 0.7
Ccdc60-202ENSMUST00000086483 Soga1E1U8D0 1418 aa19.41■□□□□ 0.7
Ccdc60-202ENSMUST00000086483 Ppp1r18Q8BQ30 594 aa19.38■□□□□ 0.69
Ccdc60-202ENSMUST00000086483 Dnmt1P13864 1620 aaKnown RBP19.37■□□□□ 0.69
Ccdc60-202ENSMUST00000086483 Pla2r1Q62028 1487 aa19.37■□□□□ 0.69
Ccdc60-202ENSMUST00000086483 Neo1P97798 1493 aa19.36■□□□□ 0.69
Ccdc60-202ENSMUST00000086483 EprsQ8CGC7 1512 aaKnown RBP19.36■□□□□ 0.69
Ccdc60-202ENSMUST00000086483 AI481877A2ALV5 1481 aa19.35■□□□□ 0.69
Ccdc60-202ENSMUST00000086483 NrkQ9R0G8 1455 aa19.34■□□□□ 0.69
Ccdc60-202ENSMUST00000086483 Ak9G3UYQ4 1894 aa19.33■□□□□ 0.69
Ccdc60-202ENSMUST00000086483 Gm14025A2AP89 1413 aa19.31■□□□□ 0.68
Ccdc60-202ENSMUST00000086483 SynmQ70IV5 1561 aa19.3■□□□□ 0.68
Ccdc60-202ENSMUST00000086483 Map3k4O08648 1597 aa19.28■□□□□ 0.68
Ccdc60-202ENSMUST00000086483 Ccdc88bQ4QRL3 1481 aa19.27■□□□□ 0.68
Ccdc60-202ENSMUST00000086483 Arhgef11Q68FM7 1552 aa19.27■□□□□ 0.67
Ccdc60-202ENSMUST00000086483 AdgbG3UZ78 1657 aa19.26■□□□□ 0.67
Ccdc60-202ENSMUST00000086483 Clasp1Q80TV8 1535 aaKnown RBP19.25■□□□□ 0.67
Ccdc60-202ENSMUST00000086483 Arhgef12Q8R4H2 1543 aaKnown RBP19.25■□□□□ 0.67
Ccdc60-202ENSMUST00000086483 BC005561E9Q5E2 1589 aa19.22■□□□□ 0.67
Ccdc60-202ENSMUST00000086483 Abcc2Q8VI47 1543 aa19.22■□□□□ 0.67
Ccdc60-202ENSMUST00000086483 TchhA0A0B4J1F9 1599 aa19.21■□□□□ 0.67
Ccdc60-202ENSMUST00000086483 Shroom4Q1W617 1475 aa19.19■□□□□ 0.66
Ccdc60-202ENSMUST00000086483 Abca16E9PWJ7 1678 aa19.19■□□□□ 0.66
Ccdc60-202ENSMUST00000086483 Ttc37F8VPK0 1563 aa19.19■□□□□ 0.66
Ccdc60-202ENSMUST00000086483 Arhgap27A2AB59 869 aa19.17■□□□□ 0.66
Ccdc60-202ENSMUST00000086483 Mapkbp1Q6NS57 1503 aa19.17■□□□□ 0.66
Ccdc60-202ENSMUST00000086483 Alpk3Q924C5 1678 aa19.17■□□□□ 0.66
Ccdc60-202ENSMUST00000086483 Adamts12Q811B3 1600 aa19.12■□□□□ 0.65
Ccdc60-202ENSMUST00000086483 PxdnQ3UQ28 1475 aa19.1■□□□□ 0.65
Ccdc60-202ENSMUST00000086483 WizO88286 1684 aaKnown RBP19.1■□□□□ 0.65
Ccdc60-202ENSMUST00000086483 Slx4Q6P1D7 1565 aa19.09■□□□□ 0.65
Ccdc60-202ENSMUST00000086483 Eif4g1Q6NZJ6 1600 aaKnown RBP19.05■□□□□ 0.64
Ccdc60-202ENSMUST00000086483 Zfyve16Q80U44 1528 aa19.02■□□□□ 0.64
Ccdc60-202ENSMUST00000086483 Jph4Q80WT0 628 aa19.02■□□□□ 0.63
Ccdc60-202ENSMUST00000086483 Igf1rQ60751 1373 aa19.01■□□□□ 0.63
Ccdc60-202ENSMUST00000086483 Zeb1Q64318 1117 aa19■□□□□ 0.63
Ccdc60-202ENSMUST00000086483 Ifnlr1Q8CGK5 535 aa19■□□□□ 0.63
Ccdc60-202ENSMUST00000086483 Depdc5P61460 1591 aa18.97■□□□□ 0.63
Ccdc60-202ENSMUST00000086483 Lrrc9Q8CDN9 1456 aa18.95■□□□□ 0.62
Ccdc60-202ENSMUST00000086483 Fndc1E9Q043 1732 aa18.94■□□□□ 0.62
Ccdc60-202ENSMUST00000086483 Arid3cA6PWV5 409 aa18.9■□□□□ 0.62
Ccdc60-202ENSMUST00000086483 Kdm5bQ80Y84 1544 aa18.9■□□□□ 0.62
Ccdc60-202ENSMUST00000086483 Rrbp1Q99PL5 1605 aaKnown RBP18.89■□□□□ 0.62
Ccdc60-202ENSMUST00000086483 Mroh2bQ7M6Y6 1581 aa18.89■□□□□ 0.61
Ccdc60-202ENSMUST00000086483 Rpap1Q80TE0 1409 aa18.87■□□□□ 0.61
Ccdc60-202ENSMUST00000086483 Cyb5rlB1AS42 316 aa18.86■□□□□ 0.61
Ccdc60-202ENSMUST00000086483 Wdr7Q920I9 1489 aa18.85■□□□□ 0.61
Ccdc60-202ENSMUST00000086483 Gm7298A0A0N4SVU1 1476 aa18.84■□□□□ 0.61
Ccdc60-202ENSMUST00000086483 AglF8VPN4 1532 aa18.83■□□□□ 0.61
Ccdc60-202ENSMUST00000086483 Abca5Q8K448 1642 aa18.82■□□□□ 0.6
Ccdc60-202ENSMUST00000086483 Carmil1Q6EDY6 1374 aa18.8■□□□□ 0.6
Ccdc60-202ENSMUST00000086483 Brwd3A2AHJ4 1799 aa18.8■□□□□ 0.6
Ccdc60-202ENSMUST00000086483 Map3k1P53349 1493 aa18.79■□□□□ 0.6
Ccdc60-202ENSMUST00000086483 MlecQ6ZQI3 291 aaKnown RBP18.79■□□□□ 0.6
Ccdc60-202ENSMUST00000086483 Plppr3Q7TPB0 716 aa18.79■□□□□ 0.6
Ccdc60-202ENSMUST00000086483 Fkbp15Q6P9Q6 1216 aaKnown RBP18.79■□□□□ 0.6
Ccdc60-202ENSMUST00000086483 Znf608Q56A10 1511 aa18.78■□□□□ 0.6
Ccdc60-202ENSMUST00000086483 Ercc6l2Q9JIM3 1537 aa18.76■□□□□ 0.59
Ccdc60-202ENSMUST00000086483 Kdm6bQ5NCY0 1641 aa18.75■□□□□ 0.59
Ccdc60-202ENSMUST00000086483 Rnf17Q99MV7 1640 aa18.75■□□□□ 0.59
Ccdc60-202ENSMUST00000086483 Polr1aO35134 1717 aaKnown RBP18.74■□□□□ 0.59
Ccdc60-202ENSMUST00000086483 NhsB1AV60 1647 aa18.73■□□□□ 0.59
Ccdc60-202ENSMUST00000086483 WrnO09053 1401 aa18.73■□□□□ 0.59
Ccdc60-202ENSMUST00000086483 Dnajc5gQ8C632 165 aa18.71■□□□□ 0.59
Ccdc60-202ENSMUST00000086483 Hecw2Q6I6G8 1578 aa18.7■□□□□ 0.58
Ccdc60-202ENSMUST00000086483 Atp10dQ8K2X1 1416 aa18.66■□□□□ 0.58
Ccdc60-202ENSMUST00000086483 Cul7Q8VE73 1689 aa18.66■□□□□ 0.58
Ccdc60-202ENSMUST00000086483 Naip2Q9QUK4 1447 aa18.66■□□□□ 0.58
Ccdc60-202ENSMUST00000086483 Npm2Q80W85 207 aa18.65■□□□□ 0.58
Ccdc60-202ENSMUST00000086483 Chic1Q8CBW7 227 aa18.65■□□□□ 0.58
Ccdc60-202ENSMUST00000086483 Fbxo41Q6NS60 873 aa18.61■□□□□ 0.57
Ccdc60-202ENSMUST00000086483 Ccdc141E9Q8Q6 1531 aa18.59■□□□□ 0.57
Ccdc60-202ENSMUST00000086483 Kiaa1210E9Q0C6 1637 aa18.59■□□□□ 0.57
Ccdc60-202ENSMUST00000086483 Arhgap31A6X8Z5 1425 aa18.58■□□□□ 0.57
Ccdc60-202ENSMUST00000086483 A2mQ6GQT1 1474 aa18.56■□□□□ 0.56
Ccdc60-202ENSMUST00000086483 Abca8bQ8K440 1620 aa18.53■□□□□ 0.56
Ccdc60-202ENSMUST00000086483 Gcc2Q8CHG3 1679 aa18.51■□□□□ 0.55
Ccdc60-202ENSMUST00000086483 Arhgap35Q91YM2 1499 aa18.5■□□□□ 0.55
Ccdc60-202ENSMUST00000086483 Fyco1Q8VDC1 1437 aa18.49■□□□□ 0.55
Ccdc60-202ENSMUST00000086483 Synj2Q9D2G5 1434 aa18.47■□□□□ 0.55
Ccdc60-202ENSMUST00000086483 Kif14L0N7N1 1674 aaKnown RBP18.47■□□□□ 0.55
Ccdc60-202ENSMUST00000086483 Cux1P53564 1515 aa18.47■□□□□ 0.55
Ccdc60-202ENSMUST00000086483 Fancd2Q80V62 1450 aa18.46■□□□□ 0.55
Ccdc60-202ENSMUST00000086483 PtprmP28828 1452 aa18.45■□□□□ 0.54
Ccdc60-202ENSMUST00000086483 Ncoa2Q61026 1462 aa18.44■□□□□ 0.54
Ccdc60-202ENSMUST00000086483 Mroh2aD3Z750 1679 aa18.42■□□□□ 0.54
Ccdc60-202ENSMUST00000086483 Clip1Q922J3 1391 aa18.41■□□□□ 0.54
Ccdc60-202ENSMUST00000086483 BlmO88700 1416 aa18.41■□□□□ 0.54
Ccdc60-202ENSMUST00000086483 Kiaa0556Q8C753 1610 aa18.41■□□□□ 0.54
Ccdc60-202ENSMUST00000086483 Ncapd3Q6ZQK0 1506 aa18.4■□□□□ 0.54
Ccdc60-202ENSMUST00000086483 Mlh3A0A1Y7VMP7 1443 aa18.37■□□□□ 0.53
Ccdc60-202ENSMUST00000086483 Camsap2Q8C1B1 1461 aa18.36■□□□□ 0.53
Ccdc60-202ENSMUST00000086483 Neurl4Q5NCX5 1563 aa18.36■□□□□ 0.53
Ccdc60-202ENSMUST00000086483 Rapgef6Q5NCJ1 1609 aa18.36■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms