RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Dnmt1P13864 1620 aaKnown RBP20.71■□□□□ 0.91
Ccdc28a-202ENSMUST00000080860 Adamts12Q811B3 1600 aa20.71■□□□□ 0.91
Ccdc28a-202ENSMUST00000080860 Abcc1O35379 1528 aa20.68■□□□□ 0.9
Ccdc28a-202ENSMUST00000080860 Abcc2Q8VI47 1543 aa20.68■□□□□ 0.9
Ccdc28a-202ENSMUST00000080860 CadpsQ80TJ1 1355 aa20.67■□□□□ 0.9
Ccdc28a-202ENSMUST00000080860 Map3k4O08648 1597 aa20.67■□□□□ 0.9
Ccdc28a-202ENSMUST00000080860 Abca16E9PWJ7 1678 aa20.64■□□□□ 0.9
Ccdc28a-202ENSMUST00000080860 Map3k1P53349 1493 aa20.63■□□□□ 0.89
Ccdc28a-202ENSMUST00000080860 Chd1P40201 1711 aa20.61■□□□□ 0.89
Ccdc28a-202ENSMUST00000080860 TchhA0A0B4J1F9 1599 aa20.61■□□□□ 0.89
Ccdc28a-202ENSMUST00000080860 EprsQ8CGC7 1512 aaKnown RBP20.61■□□□□ 0.89
Ccdc28a-202ENSMUST00000080860 Arhgef5E9Q7D5 1581 aa20.6■□□□□ 0.89
Ccdc28a-202ENSMUST00000080860 Gm156Q58A37 223 aa20.6■□□□□ 0.89
Ccdc28a-202ENSMUST00000080860 PxdnQ3UQ28 1475 aa20.6■□□□□ 0.89
Ccdc28a-202ENSMUST00000080860 PtprtQ99M80 1454 aa20.57■□□□□ 0.88
Ccdc28a-202ENSMUST00000080860 Ythdc2B2RR83 1445 aaKnown RBP20.57■□□□□ 0.88
Ccdc28a-202ENSMUST00000080860 BC005561E9Q5E2 1589 aa20.57■□□□□ 0.88
Ccdc28a-202ENSMUST00000080860 WizO88286 1684 aaKnown RBP20.57■□□□□ 0.88
Ccdc28a-202ENSMUST00000080860 AknaQ80VW7 1404 aa20.55■□□□□ 0.88
Ccdc28a-202ENSMUST00000080860 Pprc1Q6NZN1 1644 aa20.53■□□□□ 0.88
Ccdc28a-202ENSMUST00000080860 Carmil1Q6EDY6 1374 aa20.53■□□□□ 0.88
Ccdc28a-202ENSMUST00000080860 Rapgef2Q8CHG7 1496 aa20.53■□□□□ 0.88
Ccdc28a-202ENSMUST00000080860 Slx4Q6P1D7 1565 aa20.52■□□□□ 0.88
Ccdc28a-202ENSMUST00000080860 Eif4g1Q6NZJ6 1600 aaKnown RBP20.51■□□□□ 0.87
Ccdc28a-202ENSMUST00000080860 Setbp1Q9Z180 1582 aa20.51■□□□□ 0.87
Ccdc28a-202ENSMUST00000080860 Neo1P97798 1493 aa20.5■□□□□ 0.87
Ccdc28a-202ENSMUST00000080860 Arhgef12Q8R4H2 1543 aaKnown RBP20.5■□□□□ 0.87
Ccdc28a-202ENSMUST00000080860 Arhgap35Q91YM2 1499 aa20.5■□□□□ 0.87
Ccdc28a-202ENSMUST00000080860 Gm14025A2AP89 1413 aa20.47■□□□□ 0.87
Ccdc28a-202ENSMUST00000080860 Soga1E1U8D0 1418 aa20.47■□□□□ 0.87
Ccdc28a-202ENSMUST00000080860 Abca5Q8K448 1642 aa20.45■□□□□ 0.87
Ccdc28a-202ENSMUST00000080860 HrcG5E8J6 738 aa20.43■□□□□ 0.86
Ccdc28a-202ENSMUST00000080860 AI481877A2ALV5 1481 aa20.41■□□□□ 0.86
Ccdc28a-202ENSMUST00000080860 Polr1aO35134 1717 aaKnown RBP20.41■□□□□ 0.86
Ccdc28a-202ENSMUST00000080860 Gm7298A0A0N4SVU1 1476 aa20.4■□□□□ 0.86
Ccdc28a-202ENSMUST00000080860 Rpap1Q80TE0 1409 aa20.38■□□□□ 0.85
Ccdc28a-202ENSMUST00000080860 Arhgap27A2AB59 869 aa20.38■□□□□ 0.85
Ccdc28a-202ENSMUST00000080860 Zeb1Q64318 1117 aa20.37■□□□□ 0.85
Ccdc28a-202ENSMUST00000080860 Pcdh10E9PXQ7 1057 aa20.34■□□□□ 0.85
Ccdc28a-202ENSMUST00000080860 Npm2Q80W85 207 aa20.3■□□□□ 0.84
Ccdc28a-202ENSMUST00000080860 Cep162Q6ZQ06 1403 aa20.29■□□□□ 0.84
Ccdc28a-202ENSMUST00000080860 Cux1P53564 1515 aa20.29■□□□□ 0.84
Ccdc28a-202ENSMUST00000080860 Jph4Q80WT0 628 aa20.28■□□□□ 0.84
Ccdc28a-202ENSMUST00000080860 Kdm5bQ80Y84 1544 aa20.27■□□□□ 0.84
Ccdc28a-202ENSMUST00000080860 Rrbp1Q99PL5 1605 aaKnown RBP20.27■□□□□ 0.84
Ccdc28a-202ENSMUST00000080860 Clip1Q922J3 1391 aa20.26■□□□□ 0.83
Ccdc28a-202ENSMUST00000080860 Ak9G3UYQ4 1894 aa20.24■□□□□ 0.83
Ccdc28a-202ENSMUST00000080860 Clasp1Q80TV8 1535 aaKnown RBP20.24■□□□□ 0.83
Ccdc28a-202ENSMUST00000080860 Fyco1Q8VDC1 1437 aa20.21■□□□□ 0.83
Ccdc28a-202ENSMUST00000080860 WrnO09053 1401 aa20.19■□□□□ 0.82
Ccdc28a-202ENSMUST00000080860 Igf1rQ60751 1373 aa20.19■□□□□ 0.82
Ccdc28a-202ENSMUST00000080860 Ttbk1Q6PCN3 1308 aa20.17■□□□□ 0.82
Ccdc28a-202ENSMUST00000080860 Lrrc9Q8CDN9 1456 aa20.17■□□□□ 0.82
Ccdc28a-202ENSMUST00000080860 Ttc37F8VPK0 1563 aa20.12■□□□□ 0.81
Ccdc28a-202ENSMUST00000080860 NhsB1AV60 1647 aa20.11■□□□□ 0.81
Ccdc28a-202ENSMUST00000080860 Ankrd26Q811D2 1581 aa20.08■□□□□ 0.81
Ccdc28a-202ENSMUST00000080860 Mapkbp1Q6NS57 1503 aa20.07■□□□□ 0.8
Ccdc28a-202ENSMUST00000080860 Cul7Q8VE73 1689 aa20.07■□□□□ 0.8
Ccdc28a-202ENSMUST00000080860 Wdr7Q920I9 1489 aa20.05■□□□□ 0.8
Ccdc28a-202ENSMUST00000080860 BlmO88700 1416 aa20.05■□□□□ 0.8
Ccdc28a-202ENSMUST00000080860 AdgbG3UZ78 1657 aa20.05■□□□□ 0.8
Ccdc28a-202ENSMUST00000080860 Arhgap31A6X8Z5 1425 aa20.04■□□□□ 0.8
Ccdc28a-202ENSMUST00000080860 Gab3Q8BSM5 595 aa20.04■□□□□ 0.8
Ccdc28a-202ENSMUST00000080860 Kiaa1210E9Q0C6 1637 aa20.04■□□□□ 0.8
Ccdc28a-202ENSMUST00000080860 Ccdc141E9Q8Q6 1531 aa20.01■□□□□ 0.79
Ccdc28a-202ENSMUST00000080860 Znf608Q56A10 1511 aa20■□□□□ 0.79
Ccdc28a-202ENSMUST00000080860 Zfyve16Q80U44 1528 aa20■□□□□ 0.79
Ccdc28a-202ENSMUST00000080860 Erich3F6QRE9 1637 aa19.98■□□□□ 0.79
Ccdc28a-202ENSMUST00000080860 Mroh2aD3Z750 1679 aa19.97■□□□□ 0.79
Ccdc28a-202ENSMUST00000080860 Ppp1r18Q8BQ30 594 aa19.97■□□□□ 0.79
Ccdc28a-202ENSMUST00000080860 Lmo7E9PYF4 1699 aaKnown RBP19.96■□□□□ 0.79
Ccdc28a-202ENSMUST00000080860 AglF8VPN4 1532 aa19.95■□□□□ 0.78
Ccdc28a-202ENSMUST00000080860 Rapgef6Q5NCJ1 1609 aa19.94■□□□□ 0.78
Ccdc28a-202ENSMUST00000080860 Gcc2Q8CHG3 1679 aa19.94■□□□□ 0.78
Ccdc28a-202ENSMUST00000080860 Abca8bQ8K440 1620 aa19.93■□□□□ 0.78
Ccdc28a-202ENSMUST00000080860 Atp10dQ8K2X1 1416 aa19.93■□□□□ 0.78
Ccdc28a-202ENSMUST00000080860 Depdc5P61460 1591 aa19.92■□□□□ 0.78
Ccdc28a-202ENSMUST00000080860 Ncoa2Q61026 1462 aa19.92■□□□□ 0.78
Ccdc28a-202ENSMUST00000080860 Arhgef11Q68FM7 1552 aa19.91■□□□□ 0.78
Ccdc28a-202ENSMUST00000080860 Fancd2Q80V62 1450 aa19.91■□□□□ 0.78
Ccdc28a-202ENSMUST00000080860 Arap1Q4LDD4 1452 aa19.9■□□□□ 0.78
Ccdc28a-202ENSMUST00000080860 Aebp1Q640N1 1128 aa19.89■□□□□ 0.77
Ccdc28a-202ENSMUST00000080860 Fkbp15Q6P9Q6 1216 aaKnown RBP19.85■□□□□ 0.77
Ccdc28a-202ENSMUST00000080860 Magi1Q6RHR9 1471 aa19.84■□□□□ 0.77
Ccdc28a-202ENSMUST00000080860 Arid3cA6PWV5 409 aa19.83■□□□□ 0.77
Ccdc28a-202ENSMUST00000080860 Kif27Q7M6Z4 1394 aa19.83■□□□□ 0.76
Ccdc28a-202ENSMUST00000080860 Setd5Q5XJV7 1441 aa19.81■□□□□ 0.76
Ccdc28a-202ENSMUST00000080860 Eea1Q8BL66 1411 aa19.81■□□□□ 0.76
Ccdc28a-202ENSMUST00000080860 Fndc1E9Q043 1732 aa19.8■□□□□ 0.76
Ccdc28a-202ENSMUST00000080860 Pcf11G3X9Z4 1553 aa19.8■□□□□ 0.76
Ccdc28a-202ENSMUST00000080860 Myt1lP97500 1187 aa19.8■□□□□ 0.76
Ccdc28a-202ENSMUST00000080860 Fam163aQ8CAA5 168 aa19.79■□□□□ 0.76
Ccdc28a-202ENSMUST00000080860 Ifnlr1Q8CGK5 535 aa19.78■□□□□ 0.76
Ccdc28a-202ENSMUST00000080860 Kiaa1551Q5DTW7 1521 aa19.77■□□□□ 0.76
Ccdc28a-202ENSMUST00000080860 Fam208aQ69ZR9 1610 aaKnown RBP19.76■□□□□ 0.75
Ccdc28a-202ENSMUST00000080860 Ncoa3O09000 1398 aa19.75■□□□□ 0.75
Ccdc28a-202ENSMUST00000080860 Alpk3Q924C5 1678 aa19.74■□□□□ 0.75
Ccdc28a-202ENSMUST00000080860 Prex2Q3LAC4 1598 aa19.71■□□□□ 0.75
Ccdc28a-202ENSMUST00000080860 Mug1P28665 1476 aa19.7■□□□□ 0.74
Ccdc28a-202ENSMUST00000080860 Kiaa0556Q8C753 1610 aa19.69■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 864.3 ms