RNA–Protein interactions for RNA: ENSMUST00000078547.11

Sec22c-201, Transcript of Vesicle-trafficking protein SEC22c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec22c, Length 5,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22c-201ENSMUST00000078547 Atad2bE9Q166 1460 aaKnown RBP13.03□□□□□ -0.32
Sec22c-201ENSMUST00000078547 1700123L14RikQ3V2K7 440 aa13.02□□□□□ -0.32
Sec22c-201ENSMUST00000078547 Irx3P81067 507 aa13.02□□□□□ -0.33
Sec22c-201ENSMUST00000078547 BicraF8VPZ9 1578 aa13.01□□□□□ -0.33
Sec22c-201ENSMUST00000078547 Kif15Q6P9L6 1387 aa13.01□□□□□ -0.33
Sec22c-201ENSMUST00000078547 BccipQ9CWI3 316 aa12.98□□□□□ -0.33
Sec22c-201ENSMUST00000078547 Phldb1Q6PDH0 1371 aaKnown RBP12.97□□□□□ -0.33
Sec22c-201ENSMUST00000078547 Tnnt2P50752 301 aa12.96□□□□□ -0.34
Sec22c-201ENSMUST00000078547 Fkbp15Q6P9Q6 1216 aaKnown RBP12.94□□□□□ -0.34
Sec22c-201ENSMUST00000078547 Ccdc27Q3V036 639 aa12.92□□□□□ -0.34
Sec22c-201ENSMUST00000078547 Cecr2E9Q2Z1 1453 aa12.92□□□□□ -0.34
Sec22c-201ENSMUST00000078547 Trim44Q9QXA7 346 aa12.91□□□□□ -0.34
Sec22c-201ENSMUST00000078547 Mapk8ip2Q9ERE9 830 aa12.9□□□□□ -0.34
Sec22c-201ENSMUST00000078547 Lmod2Q3UHZ5 550 aa12.9□□□□□ -0.34
Sec22c-201ENSMUST00000078547 Znf316Q6PGE4 1016 aa12.89□□□□□ -0.35
Sec22c-201ENSMUST00000078547 Cc2d2aQ8CFW7 1633 aa12.89□□□□□ -0.35
Sec22c-201ENSMUST00000078547 Q8BT18 775 aa12.89□□□□□ -0.35
Sec22c-201ENSMUST00000078547 Rsf1E9PWW9 1441 aaKnown RBP12.88□□□□□ -0.35
Sec22c-201ENSMUST00000078547 Fgd1P52734 960 aa12.88□□□□□ -0.35
Sec22c-201ENSMUST00000078547 Sall2Q9QX96 1004 aa12.87□□□□□ -0.35
Sec22c-201ENSMUST00000078547 Smarca4Q3TKT4 1613 aaKnown RBP12.85□□□□□ -0.35
Sec22c-201ENSMUST00000078547 Slc4a1apE9PX68 744 aa12.85□□□□□ -0.35
Sec22c-201ENSMUST00000078547 Iqgap2Q3UQ44 1575 aa12.84□□□□□ -0.35
Sec22c-201ENSMUST00000078547 Fam71e1A1L3C1 212 aa12.83□□□□□ -0.36
Sec22c-201ENSMUST00000078547 Smarca2Q6DIC0 1577 aa12.82□□□□□ -0.36
Sec22c-201ENSMUST00000078547 Plekhg3Q4VAC9 1341 aa12.82□□□□□ -0.36
Sec22c-201ENSMUST00000078547 PtmaP26350 111 aa12.8□□□□□ -0.36
Sec22c-201ENSMUST00000078547 Prm3Q62100 101 aa12.8□□□□□ -0.36
Sec22c-201ENSMUST00000078547 Irx6Q9ER75 438 aa12.8□□□□□ -0.36
Sec22c-201ENSMUST00000078547 Clstn1Q9EPL2 979 aa12.8□□□□□ -0.36
Sec22c-201ENSMUST00000078547 Hdac5Q9Z2V6 1113 aa12.8□□□□□ -0.36
Sec22c-201ENSMUST00000078547 Rad21Q61550 635 aaKnown RBP12.79□□□□□ -0.36
Sec22c-201ENSMUST00000078547 Ppp4r2Q0VGB7 417 aa12.78□□□□□ -0.36
Sec22c-201ENSMUST00000078547 Cux2P70298 1426 aa12.77□□□□□ -0.36
Sec22c-201ENSMUST00000078547 Arid4bA2CG63 1314 aaKnown RBP12.77□□□□□ -0.37
Sec22c-201ENSMUST00000078547 PnnO35691 725 aaKnown RBP12.76□□□□□ -0.37
Sec22c-201ENSMUST00000078547 Cep164Q5DU05 1446 aa12.76□□□□□ -0.37
Sec22c-201ENSMUST00000078547 AU015836B2RUM3 263 aa12.76□□□□□ -0.37
Sec22c-201ENSMUST00000078547 Calr4Q3TQS0 420 aa12.76□□□□□ -0.37
Sec22c-201ENSMUST00000078547 Eid3Q3V124 375 aa12.74□□□□□ -0.37
Sec22c-201ENSMUST00000078547 Trim26Q99PN3 545 aa12.73□□□□□ -0.37
Sec22c-201ENSMUST00000078547 Pabpn1Q8CCS6 302 aaKnown RBP12.72□□□□□ -0.37
Sec22c-201ENSMUST00000078547 Rtn4Q99P72 1162 aaKnown RBP12.7□□□□□ -0.38
Sec22c-201ENSMUST00000078547 Safb2Q80YR5 991 aaKnown RBP12.69□□□□□ -0.38
Sec22c-201ENSMUST00000078547 Crybg2B7ZCC2 1516 aa12.69□□□□□ -0.38
Sec22c-201ENSMUST00000078547 4933402E13RikQ9D4D2 429 aa12.69□□□□□ -0.38
Sec22c-201ENSMUST00000078547 Podxl2Q8CAE9 603 aa12.68□□□□□ -0.38
Sec22c-201ENSMUST00000078547 Gtf3c3Q3TMP1 882 aa12.67□□□□□ -0.38
Sec22c-201ENSMUST00000078547 Ppp1r18Q8BQ30 594 aa12.67□□□□□ -0.38
Sec22c-201ENSMUST00000078547 Mrc2Q64449 1479 aa12.67□□□□□ -0.38
Sec22c-201ENSMUST00000078547 Wdr43Q6ZQL4 677 aaKnown RBP12.67□□□□□ -0.38
Sec22c-201ENSMUST00000078547 Ccdc18Q640L5 1455 aa12.67□□□□□ -0.38
Sec22c-201ENSMUST00000078547 Noc3lQ8VI84 807 aaKnown RBP12.66□□□□□ -0.38
Sec22c-201ENSMUST00000078547 Frmpd1A2AKB4 1549 aa12.65□□□□□ -0.38
Sec22c-201ENSMUST00000078547 PrkcshO08795 521 aa12.65□□□□□ -0.38
Sec22c-201ENSMUST00000078547 Hsp90ab1P11499 724 aaKnown RBP12.65□□□□□ -0.38
Sec22c-201ENSMUST00000078547 Mak16Q8BGS0 296 aaKnown RBP12.64□□□□□ -0.39
Sec22c-201ENSMUST00000078547 Plcb2A3KGF7 1181 aa12.62□□□□□ -0.39
Sec22c-201ENSMUST00000078547 Golga3P55937 1487 aa12.62□□□□□ -0.39
Sec22c-201ENSMUST00000078547 Arhgap27A2AB59 869 aa12.61□□□□□ -0.39
Sec22c-201ENSMUST00000078547 Gtf3c5Q8R2T8 520 aa12.6□□□□□ -0.39
Sec22c-201ENSMUST00000078547 CanxP35564 591 aaKnown RBP12.6□□□□□ -0.39
Sec22c-201ENSMUST00000078547 P3h3Q8CG70 732 aa12.59□□□□□ -0.39
Sec22c-201ENSMUST00000078547 Trim30dE9PWL0 497 aa12.59□□□□□ -0.39
Sec22c-201ENSMUST00000078547 Pes1Q9EQ61 584 aaKnown RBP12.59□□□□□ -0.39
Sec22c-201ENSMUST00000078547 CftrP26361 1476 aa12.58□□□□□ -0.4
Sec22c-201ENSMUST00000078547 Adam1bQ8R534 806 aa12.58□□□□□ -0.4
Sec22c-201ENSMUST00000078547 Map7d2A2AG50 781 aa12.57□□□□□ -0.4
Sec22c-201ENSMUST00000078547 Synj1Q8CHC4 1574 aa12.57□□□□□ -0.4
Sec22c-201ENSMUST00000078547 AknaQ80VW7 1404 aa12.57□□□□□ -0.4
Sec22c-201ENSMUST00000078547 Taok2Q6ZQ29 1240 aa12.57□□□□□ -0.4
Sec22c-201ENSMUST00000078547 Thoc2B1AZI6 1594 aaKnown RBP12.55□□□□□ -0.4
Sec22c-201ENSMUST00000078547 Htatsf1Q8BGC0 757 aa12.54□□□□□ -0.4
Sec22c-201ENSMUST00000078547 Wdr62Q3U3T8 1523 aa12.53□□□□□ -0.4
Sec22c-201ENSMUST00000078547 Casc1Q6TDU8 730 aa12.53□□□□□ -0.4
Sec22c-201ENSMUST00000078547 Mrs2Q5NCE8 434 aa12.51□□□□□ -0.41
Sec22c-201ENSMUST00000078547 Clip1Q922J3 1391 aa12.5□□□□□ -0.41
Sec22c-201ENSMUST00000078547 Rrp12Q6P5B0 1295 aaKnown RBP12.5□□□□□ -0.41
Sec22c-201ENSMUST00000078547 Anapc15P60007 132 aa12.49□□□□□ -0.41
Sec22c-201ENSMUST00000078547 Dnttip2Q8R2M2 758 aaKnown RBP12.49□□□□□ -0.41
Sec22c-201ENSMUST00000078547 MlecQ6ZQI3 291 aaKnown RBP12.48□□□□□ -0.41
Sec22c-201ENSMUST00000078547 Ccer2J3QPU5 274 aa12.47□□□□□ -0.41
Sec22c-201ENSMUST00000078547 Isy1Q69ZQ2 285 aaKnown RBP12.47□□□□□ -0.41
Sec22c-201ENSMUST00000078547 Arid3cA6PWV5 409 aa12.46□□□□□ -0.41
Sec22c-201ENSMUST00000078547 Urb2E9Q7L1 1524 aaKnown RBP12.46□□□□□ -0.41
Sec22c-201ENSMUST00000078547 Dhx29Q6PGC1 1365 aaKnown RBP12.45□□□□□ -0.42
Sec22c-201ENSMUST00000078547 Calcoco2A2A6M5 331 aa12.45□□□□□ -0.42
Sec22c-201ENSMUST00000078547 Cttnbp2B9EJA2 1648 aa12.45□□□□□ -0.42
Sec22c-201ENSMUST00000078547 SetQ9EQU5 289 aaKnown RBP12.45□□□□□ -0.42
Sec22c-201ENSMUST00000078547 Sh3bp5Q9Z131 463 aa12.44□□□□□ -0.42
Sec22c-201ENSMUST00000078547 Spryd3E9Q9B3 442 aa12.43□□□□□ -0.42
Sec22c-201ENSMUST00000078547 MyclP10166 368 aa12.42□□□□□ -0.42
Sec22c-201ENSMUST00000078547 PtmsQ9D0J8 101 aaKnown RBP12.42□□□□□ -0.42
Sec22c-201ENSMUST00000078547 Gm6268A2A3U9 297 aa12.41□□□□□ -0.42
Sec22c-201ENSMUST00000078547 MsnP26041 577 aaKnown RBP12.41□□□□□ -0.42
Sec22c-201ENSMUST00000078547 Fam135aQ6NS59 1506 aa12.39□□□□□ -0.43
Sec22c-201ENSMUST00000078547 Apbb1Q9QXJ1 710 aa12.38□□□□□ -0.43
Sec22c-201ENSMUST00000078547 Hsp90b1P08113 802 aaKnown RBP12.38□□□□□ -0.43
Sec22c-201ENSMUST00000078547 Dnajc5P60904 198 aa12.38□□□□□ -0.43
Sec22c-201ENSMUST00000078547 Pdcl3Q8BVF2 240 aa12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms