RNA–Protein interactions for RNA: ENSMUST00000075084.4

Trim58-201, Transcript of E3 ubiquitin-protein ligase TRIM58, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim58, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58-201ENSMUST00000075084 Setd5Q5XJV7 1441 aa27.8■■■□□ 2.04
Trim58-201ENSMUST00000075084 Arhgef5E9Q7D5 1581 aa27.78■■■□□ 2.04
Trim58-201ENSMUST00000075084 Pcgf6Q99NA9 353 aa27.76■■■□□ 2.03
Trim58-201ENSMUST00000075084 Erich3F6QRE9 1637 aa27.73■■■□□ 2.03
Trim58-201ENSMUST00000075084 Ankrd26Q811D2 1581 aa27.73■■■□□ 2.03
Trim58-201ENSMUST00000075084 Magi3Q9EQJ9 1476 aa27.71■■■□□ 2.03
Trim58-201ENSMUST00000075084 Ap3b1Q9Z1T1 1105 aa27.69■■■□□ 2.02
Trim58-201ENSMUST00000075084 Grin2aP35436 1464 aa27.68■■■□□ 2.02
Trim58-201ENSMUST00000075084 Carmil1Q6EDY6 1374 aa27.67■■■□□ 2.02
Trim58-201ENSMUST00000075084 Pla2r1Q62028 1487 aa27.66■■■□□ 2.02
Trim58-201ENSMUST00000075084 Eif4g3Q80XI3 1579 aaKnown RBP27.65■■■□□ 2.02
Trim58-201ENSMUST00000075084 Setd1bQ8CFT2 1985 aa27.65■■■□□ 2.02
Trim58-201ENSMUST00000075084 Nup160Q9Z0W3 1402 aaKnown RBP27.63■■■□□ 2.01
Trim58-201ENSMUST00000075084 Tiam1Q60610 1591 aa27.62■■■□□ 2.01
Trim58-201ENSMUST00000075084 Ncapd3Q6ZQK0 1506 aa27.62■■■□□ 2.01
Trim58-201ENSMUST00000075084 Pbrm1Q8BSQ9 1634 aaKnown RBP27.62■■■□□ 2.01
Trim58-201ENSMUST00000075084 Cux1P53564 1515 aa27.57■■■□□ 2
Trim58-201ENSMUST00000075084 Pcf11G3X9Z4 1553 aa27.57■■■□□ 2
Trim58-201ENSMUST00000075084 Supt5hO55201 1082 aaKnown RBP27.55■■■□□ 2
Trim58-201ENSMUST00000075084 Lmo7E9PYF4 1699 aaKnown RBP27.53■■■□□ 2
Trim58-201ENSMUST00000075084 Naip1Q9QWK5 1403 aa27.52■■■□□ 2
Trim58-201ENSMUST00000075084 Rusc2Q80U22 1514 aa27.51■■■□□ 2
Trim58-201ENSMUST00000075084 Cc2d2bA0A286YDU8 1405 aa27.51■■□□□ 1.99
Trim58-201ENSMUST00000075084 Gpatch8A2A6A1 1505 aa27.49■■□□□ 1.99
Trim58-201ENSMUST00000075084 EprsQ8CGC7 1512 aaKnown RBP27.49■■□□□ 1.99
Trim58-201ENSMUST00000075084 Slx4Q6P1D7 1565 aa27.45■■□□□ 1.98
Trim58-201ENSMUST00000075084 Polr1aO35134 1717 aaKnown RBP27.44■■□□□ 1.98
Trim58-201ENSMUST00000075084 BlmO88700 1416 aa27.41■■□□□ 1.98
Trim58-201ENSMUST00000075084 Fyco1Q8VDC1 1437 aa27.41■■□□□ 1.98
Trim58-201ENSMUST00000075084 CntlnA2AM05 1397 aa27.37■■□□□ 1.97
Trim58-201ENSMUST00000075084 Adamts12Q811B3 1600 aa27.37■■□□□ 1.97
Trim58-201ENSMUST00000075084 WizO88286 1684 aaKnown RBP27.36■■□□□ 1.97
Trim58-201ENSMUST00000075084 Rpap1Q80TE0 1409 aa27.36■■□□□ 1.97
Trim58-201ENSMUST00000075084 CadpsQ80TJ1 1355 aa27.33■■□□□ 1.97
Trim58-201ENSMUST00000075084 Peg3Q3URU2 1571 aa27.32■■□□□ 1.96
Trim58-201ENSMUST00000075084 TchhA0A0B4J1F9 1599 aa27.3■■□□□ 1.96
Trim58-201ENSMUST00000075084 PxdnQ3UQ28 1475 aa27.3■■□□□ 1.96
Trim58-201ENSMUST00000075084 Abca16E9PWJ7 1678 aa27.29■■□□□ 1.96
Trim58-201ENSMUST00000075084 Gm7298A0A0N4SVU1 1476 aa27.28■■□□□ 1.96
Trim58-201ENSMUST00000075084 Kdm5bQ80Y84 1544 aa27.25■■□□□ 1.95
Trim58-201ENSMUST00000075084 Las1lA2BE28 776 aaKnown RBP27.24■■□□□ 1.95
Trim58-201ENSMUST00000075084 Aebp1Q640N1 1128 aa27.24■■□□□ 1.95
Trim58-201ENSMUST00000075084 Abca5Q8K448 1642 aa27.22■■□□□ 1.95
Trim58-201ENSMUST00000075084 Lmod2Q3UHZ5 550 aa27.21■■□□□ 1.95
Trim58-201ENSMUST00000075084 Soga1E1U8D0 1418 aa27.19■■□□□ 1.94
Trim58-201ENSMUST00000075084 Abcc2Q8VI47 1543 aa27.18■■□□□ 1.94
Trim58-201ENSMUST00000075084 Arhgap27A2AB59 869 aa27.16■■□□□ 1.94
Trim58-201ENSMUST00000075084 TonslQ6NZL6 1363 aa27.14■■□□□ 1.94
Trim58-201ENSMUST00000075084 Gm1043A0A140LJC2 1431 aa27.14■■□□□ 1.93
Trim58-201ENSMUST00000075084 Sall2Q9QX96 1004 aa27.1■■□□□ 1.93
Trim58-201ENSMUST00000075084 Fgd6Q69ZL1 1399 aa27.08■■□□□ 1.93
Trim58-201ENSMUST00000075084 3425401B19RikD3Z1D3 1412 aa27.06■■□□□ 1.92
Trim58-201ENSMUST00000075084 Shroom2A2ALU4 1481 aa27.03■■□□□ 1.92
Trim58-201ENSMUST00000075084 Map3k4O08648 1597 aa27.03■■□□□ 1.92
Trim58-201ENSMUST00000075084 WrnO09053 1401 aa27.02■■□□□ 1.92
Trim58-201ENSMUST00000075084 Dnmt1P13864 1620 aaKnown RBP27.02■■□□□ 1.92
Trim58-201ENSMUST00000075084 Aebp2Q9Z248 504 aaKnown RBP27.01■■□□□ 1.91
Trim58-201ENSMUST00000075084 AknaQ80VW7 1404 aa26.98■■□□□ 1.91
Trim58-201ENSMUST00000075084 BC005561E9Q5E2 1589 aa26.96■■□□□ 1.91
Trim58-201ENSMUST00000075084 Fam50aQ9WV03 339 aaKnown RBP26.95■■□□□ 1.91
Trim58-201ENSMUST00000075084 Wdr66E9Q743 1299 aa26.95■■□□□ 1.9
Trim58-201ENSMUST00000075084 Neo1P97798 1493 aa26.93■■□□□ 1.9
Trim58-201ENSMUST00000075084 Kif27Q7M6Z4 1394 aa26.92■■□□□ 1.9
Trim58-201ENSMUST00000075084 Eid3Q3V124 375 aa26.88■■□□□ 1.89
Trim58-201ENSMUST00000075084 Lmtk2Q3TYD6 1471 aa26.88■■□□□ 1.89
Trim58-201ENSMUST00000075084 Fhad1A6PWD2 1420 aa26.85■■□□□ 1.89
Trim58-201ENSMUST00000075084 Mia2Q91ZV0 1396 aa26.85■■□□□ 1.89
Trim58-201ENSMUST00000075084 Ccnb3Q810T2 1396 aa26.84■■□□□ 1.89
Trim58-201ENSMUST00000075084 Naip2Q9QUK4 1447 aa26.83■■□□□ 1.89
Trim58-201ENSMUST00000075084 ClspnQ80YR7 1315 aa26.82■■□□□ 1.88
Trim58-201ENSMUST00000075084 A2mQ6GQT1 1474 aa26.8■■□□□ 1.88
Trim58-201ENSMUST00000075084 Abcc1O35379 1528 aa26.8■■□□□ 1.88
Trim58-201ENSMUST00000075084 Jph4Q80WT0 628 aa26.8■■□□□ 1.88
Trim58-201ENSMUST00000075084 Zcchc11B2RX14 1644 aaKnown RBP26.79■■□□□ 1.88
Trim58-201ENSMUST00000075084 Vps8Q0P5W1 1427 aa26.79■■□□□ 1.88
Trim58-201ENSMUST00000075084 NexmifQ5DTT1 1515 aa26.78■■□□□ 1.88
Trim58-201ENSMUST00000075084 Gcc2Q8CHG3 1679 aa26.78■■□□□ 1.88
Trim58-201ENSMUST00000075084 Arhgef12Q8R4H2 1543 aaKnown RBP26.77■■□□□ 1.88
Trim58-201ENSMUST00000075084 Rapgef6Q5NCJ1 1609 aa26.76■■□□□ 1.88
Trim58-201ENSMUST00000075084 Arhgap31A6X8Z5 1425 aa26.75■■□□□ 1.87
Trim58-201ENSMUST00000075084 Pelp1Q9DBD5 1123 aaKnown RBP26.75■■□□□ 1.87
Trim58-201ENSMUST00000075084 Gm14025A2AP89 1413 aa26.75■■□□□ 1.87
Trim58-201ENSMUST00000075084 Pabpn1Q8CCS6 302 aaKnown RBP26.73■■□□□ 1.87
Trim58-201ENSMUST00000075084 Chd1P40201 1711 aa26.71■■□□□ 1.87
Trim58-201ENSMUST00000075084 Ccer2J3QPU5 274 aa26.7■■□□□ 1.86
Trim58-201ENSMUST00000075084 Rrbp1Q99PL5 1605 aaKnown RBP26.67■■□□□ 1.86
Trim58-201ENSMUST00000075084 Ccdc141E9Q8Q6 1531 aa26.67■■□□□ 1.86
Trim58-201ENSMUST00000075084 Mug1P28665 1476 aa26.64■■□□□ 1.86
Trim58-201ENSMUST00000075084 Ncoa3O09000 1398 aa26.64■■□□□ 1.86
Trim58-201ENSMUST00000075084 Ankrd36D3Z4K0 1415 aa26.64■■□□□ 1.86
Trim58-201ENSMUST00000075084 Fkbp15Q6P9Q6 1216 aaKnown RBP26.64■■□□□ 1.85
Trim58-201ENSMUST00000075084 Arhgef11Q68FM7 1552 aa26.63■■□□□ 1.85
Trim58-201ENSMUST00000075084 Ncoa2Q61026 1462 aa26.63■■□□□ 1.85
Trim58-201ENSMUST00000075084 Mroh2aD3Z750 1679 aa26.6■■□□□ 1.85
Trim58-201ENSMUST00000075084 Ppargc1bQ8VHJ7 1014 aa26.59■■□□□ 1.85
Trim58-201ENSMUST00000075084 UacaQ8CGB3 1411 aa26.59■■□□□ 1.85
Trim58-201ENSMUST00000075084 Chic2Q9D9G3 165 aa26.58■■□□□ 1.85
Trim58-201ENSMUST00000075084 Dennd4bQ3U1Y4 1499 aa26.58■■□□□ 1.85
Trim58-201ENSMUST00000075084 Ythdc2B2RR83 1445 aaKnown RBP26.56■■□□□ 1.84
Trim58-201ENSMUST00000075084 Magi1Q6RHR9 1471 aa26.55■■□□□ 1.84
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms