RNA–Protein interactions for RNA: ENSMUST00000072008.10

Sh3rf2-201, Transcript of Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf2, Length 5,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2-201ENSMUST00000072008 CftrP26361 1476 aa13.8□□□□□ -0.2
Sh3rf2-201ENSMUST00000072008 Mtus2Q3UHD3 1353 aa13.79□□□□□ -0.2
Sh3rf2-201ENSMUST00000072008 Sall2Q9QX96 1004 aa13.78□□□□□ -0.2
Sh3rf2-201ENSMUST00000072008 Smarca2Q6DIC0 1577 aa13.78□□□□□ -0.2
Sh3rf2-201ENSMUST00000072008 Phldb1Q6PDH0 1371 aaKnown RBP13.77□□□□□ -0.2
Sh3rf2-201ENSMUST00000072008 Cep162Q6ZQ06 1403 aa13.75□□□□□ -0.21
Sh3rf2-201ENSMUST00000072008 ScribQ80U72 1612 aa13.74□□□□□ -0.21
Sh3rf2-201ENSMUST00000072008 Prdm10Q3UTQ7 1184 aa13.74□□□□□ -0.21
Sh3rf2-201ENSMUST00000072008 Plppr3Q7TPB0 716 aa13.73□□□□□ -0.21
Sh3rf2-201ENSMUST00000072008 Mapk8ip2Q9ERE9 830 aa13.72□□□□□ -0.21
Sh3rf2-201ENSMUST00000072008 Smarca4Q3TKT4 1613 aaKnown RBP13.71□□□□□ -0.21
Sh3rf2-201ENSMUST00000072008 Ccdc88bQ4QRL3 1481 aa13.71□□□□□ -0.21
Sh3rf2-201ENSMUST00000072008 Kif27Q7M6Z4 1394 aa13.71□□□□□ -0.21
Sh3rf2-201ENSMUST00000072008 Polr3glQ8R0C0 218 aa13.71□□□□□ -0.22
Sh3rf2-201ENSMUST00000072008 Cwc22Q8C5N3 908 aaKnown RBP13.7□□□□□ -0.22
Sh3rf2-201ENSMUST00000072008 Cux2P70298 1426 aa13.7□□□□□ -0.22
Sh3rf2-201ENSMUST00000072008 Rgl3Q3UYI5 709 aa13.69□□□□□ -0.22
Sh3rf2-201ENSMUST00000072008 IqubQ8CDK3 788 aa13.69□□□□□ -0.22
Sh3rf2-201ENSMUST00000072008 Anks4bQ8K3X6 423 aa13.68□□□□□ -0.22
Sh3rf2-201ENSMUST00000072008 Mrs2Q5NCE8 434 aa13.67□□□□□ -0.22
Sh3rf2-201ENSMUST00000072008 4930567H17RikQ3V0K5 233 aa13.66□□□□□ -0.22
Sh3rf2-201ENSMUST00000072008 Rrp7aQ9D1C9 280 aaKnown RBP13.65□□□□□ -0.22
Sh3rf2-201ENSMUST00000072008 Mroh3A0A1D5RM54 893 aa13.64□□□□□ -0.23
Sh3rf2-201ENSMUST00000072008 Cecr2E9Q2Z1 1453 aa13.64□□□□□ -0.23
Sh3rf2-201ENSMUST00000072008 CntlnA2AM05 1397 aa13.64□□□□□ -0.23
Sh3rf2-201ENSMUST00000072008 Srpk2O54781 681 aaKnown RBP13.64□□□□□ -0.23
Sh3rf2-201ENSMUST00000072008 Fyco1Q8VDC1 1437 aa13.64□□□□□ -0.23
Sh3rf2-201ENSMUST00000072008 Cttnbp2B9EJA2 1648 aa13.63□□□□□ -0.23
Sh3rf2-201ENSMUST00000072008 Dhx57Q6P5D3 1388 aaKnown RBP13.63□□□□□ -0.23
Sh3rf2-201ENSMUST00000072008 Synj1Q8CHC4 1574 aa13.62□□□□□ -0.23
Sh3rf2-201ENSMUST00000072008 Aebp1Q640N1 1128 aa13.61□□□□□ -0.23
Sh3rf2-201ENSMUST00000072008 P3h3Q8CG70 732 aa13.61□□□□□ -0.23
Sh3rf2-201ENSMUST00000072008 Carmil1Q6EDY6 1374 aa13.6□□□□□ -0.23
Sh3rf2-201ENSMUST00000072008 Baz1bQ9Z277 1479 aa13.6□□□□□ -0.23
Sh3rf2-201ENSMUST00000072008 Zfp777B9EKF4 885 aa13.59□□□□□ -0.23
Sh3rf2-201ENSMUST00000072008 Card11Q8CIS0 1159 aa13.59□□□□□ -0.23
Sh3rf2-201ENSMUST00000072008 Gm20521D3Z5F7 333 aa13.57□□□□□ -0.24
Sh3rf2-201ENSMUST00000072008 Calr4Q3TQS0 420 aa13.57□□□□□ -0.24
Sh3rf2-201ENSMUST00000072008 Rpap1Q80TE0 1409 aa13.57□□□□□ -0.24
Sh3rf2-201ENSMUST00000072008 AknaQ80VW7 1404 aa13.55□□□□□ -0.24
Sh3rf2-201ENSMUST00000072008 Kdm2aP59997 1161 aa13.53□□□□□ -0.24
Sh3rf2-201ENSMUST00000072008 LrpprcQ6PB66 1392 aaKnown RBP13.53□□□□□ -0.24
Sh3rf2-201ENSMUST00000072008 Arhgap35Q91YM2 1499 aa13.53□□□□□ -0.24
Sh3rf2-201ENSMUST00000072008 Rad21Q61550 635 aaKnown RBP13.52□□□□□ -0.24
Sh3rf2-201ENSMUST00000072008 Grwd1Q810D6 446 aaKnown RBP13.52□□□□□ -0.24
Sh3rf2-201ENSMUST00000072008 Exosc9Q9JHI7 438 aaKnown RBP13.51□□□□□ -0.25
Sh3rf2-201ENSMUST00000072008 Map4P27546 1125 aaKnown RBP13.5□□□□□ -0.25
Sh3rf2-201ENSMUST00000072008 Iqgap2Q3UQ44 1575 aa13.5□□□□□ -0.25
Sh3rf2-201ENSMUST00000072008 Rsph4aQ8BYM7 716 aa13.49□□□□□ -0.25
Sh3rf2-201ENSMUST00000072008 Aplp2Q06335 707 aa13.48□□□□□ -0.25
Sh3rf2-201ENSMUST00000072008 Lemd3Q9WU40 921 aa13.48□□□□□ -0.25
Sh3rf2-201ENSMUST00000072008 Arid4bA2CG63 1314 aaKnown RBP13.47□□□□□ -0.25
Sh3rf2-201ENSMUST00000072008 Ppp1r18Q8BQ30 594 aa13.46□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 Fgd1P52734 960 aa13.45□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 Stk24Q99KH8 431 aa13.45□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 Wdr43Q6ZQL4 677 aaKnown RBP13.44□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 Pkd2O35245 966 aa13.44□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 Stag3O70576 1240 aa13.44□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 Dhx29Q6PGC1 1365 aaKnown RBP13.43□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 DaxxO35613 739 aa13.43□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 Csrnp3P59055 597 aa13.42□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 Ofd1Q80Z25 1017 aa13.42□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 Rapgef2Q8CHG7 1496 aa13.42□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 Iqcf3Q9D498 203 aa13.42□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 Ppp4r2Q0VGB7 417 aa13.41□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 Mapk8ip3Q9ESN9 1337 aa13.41□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 Plekhh2Q8C115 1491 aa13.41□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 Chmp4bQ9D8B3 224 aaKnown RBP13.4□□□□□ -0.26
Sh3rf2-201ENSMUST00000072008 Aebp2Q9Z248 504 aaKnown RBP13.39□□□□□ -0.27
Sh3rf2-201ENSMUST00000072008 Fhad1A6PWD2 1420 aa13.39□□□□□ -0.27
Sh3rf2-201ENSMUST00000072008 UacaQ8CGB3 1411 aa13.39□□□□□ -0.27
Sh3rf2-201ENSMUST00000072008 Cabp1Q9JLK7 227 aa13.38□□□□□ -0.27
Sh3rf2-201ENSMUST00000072008 Arid3cA6PWV5 409 aa13.37□□□□□ -0.27
Sh3rf2-201ENSMUST00000072008 Hspa5P20029 655 aaKnown RBP13.37□□□□□ -0.27
Sh3rf2-201ENSMUST00000072008 Mphosph9A6H5Y1 991 aa13.36□□□□□ -0.27
Sh3rf2-201ENSMUST00000072008 NudcO35685 332 aaKnown RBP13.36□□□□□ -0.27
Sh3rf2-201ENSMUST00000072008 Efcab5A0JP43 1406 aa13.35□□□□□ -0.27
Sh3rf2-201ENSMUST00000072008 MyclP10166 368 aa13.34□□□□□ -0.27
Sh3rf2-201ENSMUST00000072008 Nup155Q99P88 1391 aaKnown RBP13.33□□□□□ -0.27
Sh3rf2-201ENSMUST00000072008 Rangap1P46061 589 aaKnown RBP13.33□□□□□ -0.28
Sh3rf2-201ENSMUST00000072008 Ncoa2Q61026 1462 aa13.33□□□□□ -0.28
Sh3rf2-201ENSMUST00000072008 Stard8Q8K031 1019 aa13.33□□□□□ -0.28
Sh3rf2-201ENSMUST00000072008 Trak1Q6PD31 939 aa13.32□□□□□ -0.28
Sh3rf2-201ENSMUST00000072008 Gtf2e1Q9D0D5 440 aa13.32□□□□□ -0.28
Sh3rf2-201ENSMUST00000072008 Polr1aO35134 1717 aaKnown RBP13.32□□□□□ -0.28
Sh3rf2-201ENSMUST00000072008 Rundc1Q0VDN7 615 aa13.31□□□□□ -0.28
Sh3rf2-201ENSMUST00000072008 Ccnb3Q810T2 1396 aa13.31□□□□□ -0.28
Sh3rf2-201ENSMUST00000072008 Bcl11aQ9QYE3 773 aa13.3□□□□□ -0.28
Sh3rf2-201ENSMUST00000072008 WrnO09053 1401 aa13.29□□□□□ -0.28
Sh3rf2-201ENSMUST00000072008 Mbd3Q9Z2D8 285 aaKnown RBP13.28□□□□□ -0.28
Sh3rf2-201ENSMUST00000072008 Tmf1B9EKI3 1091 aa13.28□□□□□ -0.28
Sh3rf2-201ENSMUST00000072008 Shroom4Q1W617 1475 aa13.28□□□□□ -0.28
Sh3rf2-201ENSMUST00000072008 Ifit1bl1D3Z6F0 470 aa13.28□□□□□ -0.28
Sh3rf2-201ENSMUST00000072008 Trim26Q99PN3 545 aa13.28□□□□□ -0.28
Sh3rf2-201ENSMUST00000072008 Rock2P70336 1388 aa13.27□□□□□ -0.29
Sh3rf2-201ENSMUST00000072008 ArxO35085 564 aa13.26□□□□□ -0.29
Sh3rf2-201ENSMUST00000072008 Cux1P53564 1515 aa13.26□□□□□ -0.29
Sh3rf2-201ENSMUST00000072008 Sart1Q9Z315 806 aaKnown RBP13.26□□□□□ -0.29
Sh3rf2-201ENSMUST00000072008 Kif3bQ61771 747 aa13.25□□□□□ -0.29
Sh3rf2-201ENSMUST00000072008 Pabpn1Q8CCS6 302 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms