RNA–Protein interactions for RNA: ENSMUST00000053856.5

Pcdhb17-201, Transcript of MCG141290, mousemouse

APPRIS P1 BASIC

Gene Pcdhb17, Length 4,660 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17-201ENSMUST00000053856 Fmn1Q05860 1466 aa15.41■□□□□ 0.06
Pcdhb17-201ENSMUST00000053856 Plppr3Q7TPB0 716 aa15.41■□□□□ 0.06
Pcdhb17-201ENSMUST00000053856 Csrnp3P59055 597 aa15.39■□□□□ 0.05
Pcdhb17-201ENSMUST00000053856 Aplp2Q06335 707 aa15.37■□□□□ 0.05
Pcdhb17-201ENSMUST00000053856 Upf2A2AT37 1269 aaKnown RBP15.34■□□□□ 0.05
Pcdhb17-201ENSMUST00000053856 Gm38655A0A286YDK6 273 aa15.33■□□□□ 0.04
Pcdhb17-201ENSMUST00000053856 IqubQ8CDK3 788 aa15.32■□□□□ 0.04
Pcdhb17-201ENSMUST00000053856 DaxxO35613 739 aa15.31■□□□□ 0.04
Pcdhb17-201ENSMUST00000053856 Mtus2Q3UHD3 1353 aa15.31■□□□□ 0.04
Pcdhb17-201ENSMUST00000053856 Chic2Q9D9G3 165 aa15.3■□□□□ 0.04
Pcdhb17-201ENSMUST00000053856 Eid3Q3V124 375 aa15.3■□□□□ 0.04
Pcdhb17-201ENSMUST00000053856 Dhx57Q6P5D3 1388 aaKnown RBP15.29■□□□□ 0.04
Pcdhb17-201ENSMUST00000053856 Mapk8ip2Q9ERE9 830 aa15.29■□□□□ 0.04
Pcdhb17-201ENSMUST00000053856 Mia2Q91ZV0 1396 aa15.28■□□□□ 0.04
Pcdhb17-201ENSMUST00000053856 Cux2P70298 1426 aa15.28■□□□□ 0.04
Pcdhb17-201ENSMUST00000053856 Ppp1r18Q8BQ30 594 aa15.23■□□□□ 0.03
Pcdhb17-201ENSMUST00000053856 Kif27Q7M6Z4 1394 aa15.22■□□□□ 0.03
Pcdhb17-201ENSMUST00000053856 CftrP26361 1476 aa15.22■□□□□ 0.03
Pcdhb17-201ENSMUST00000053856 Srpk2O54781 681 aaKnown RBP15.19■□□□□ 0.02
Pcdhb17-201ENSMUST00000053856 P3h3Q8CG70 732 aa15.19■□□□□ 0.02
Pcdhb17-201ENSMUST00000053856 Smarca4Q3TKT4 1613 aaKnown RBP15.18■□□□□ 0.02
Pcdhb17-201ENSMUST00000053856 Cwc22Q8C5N3 908 aaKnown RBP15.17■□□□□ 0.02
Pcdhb17-201ENSMUST00000053856 Zbtb4Q5F293 982 aa15.17■□□□□ 0.02
Pcdhb17-201ENSMUST00000053856 Rrp7aQ9D1C9 280 aaKnown RBP15.17■□□□□ 0.02
Pcdhb17-201ENSMUST00000053856 Lemd3Q9WU40 921 aa15.17■□□□□ 0.02
Pcdhb17-201ENSMUST00000053856 Smarca2Q6DIC0 1577 aa15.16■□□□□ 0.02
Pcdhb17-201ENSMUST00000053856 Mroh3A0A1D5RM54 893 aa15.16■□□□□ 0.02
Pcdhb17-201ENSMUST00000053856 AknaQ80VW7 1404 aa15.16■□□□□ 0.02
Pcdhb17-201ENSMUST00000053856 Rpap1Q80TE0 1409 aa15.15■□□□□ 0.02
Pcdhb17-201ENSMUST00000053856 Calr4Q3TQS0 420 aa15.14■□□□□ 0.01
Pcdhb17-201ENSMUST00000053856 Carmil1Q6EDY6 1374 aa15.12■□□□□ 0.01
Pcdhb17-201ENSMUST00000053856 Arid4bA2CG63 1314 aaKnown RBP15.11■□□□□ 0.01
Pcdhb17-201ENSMUST00000053856 LrpprcQ6PB66 1392 aaKnown RBP15.11■□□□□ 0.01
Pcdhb17-201ENSMUST00000053856 CntlnA2AM05 1397 aa15.1■□□□□ 0.01
Pcdhb17-201ENSMUST00000053856 Pabpn1Q8CCS6 302 aaKnown RBP15.08■□□□□ 0
Pcdhb17-201ENSMUST00000053856 MyclP10166 368 aa15.08■□□□□ 0
Pcdhb17-201ENSMUST00000053856 Gm20521D3Z5F7 333 aa15.07■□□□□ 0
Pcdhb17-201ENSMUST00000053856 Ppp4r2Q0VGB7 417 aa15.07■□□□□ 0
Pcdhb17-201ENSMUST00000053856 Aebp1Q640N1 1128 aa15.06■□□□□ 0
Pcdhb17-201ENSMUST00000053856 Baz1bQ9Z277 1479 aa15.05■□□□□ 0
Pcdhb17-201ENSMUST00000053856 Fyco1Q8VDC1 1437 aa15.05■□□□□ 0
Pcdhb17-201ENSMUST00000053856 Cep162Q6ZQ06 1403 aa15.04■□□□□ -0
Pcdhb17-201ENSMUST00000053856 Prdm10Q3UTQ7 1184 aa15.04■□□□□ -0
Pcdhb17-201ENSMUST00000053856 Rgl3Q3UYI5 709 aa15.04■□□□□ -0
Pcdhb17-201ENSMUST00000053856 Iqcf3Q9D498 203 aa15.04■□□□□ -0
Pcdhb17-201ENSMUST00000053856 Exosc9Q9JHI7 438 aaKnown RBP15.03■□□□□ -0
Pcdhb17-201ENSMUST00000053856 Polr3glQ8R0C0 218 aa15.03■□□□□ -0
Pcdhb17-201ENSMUST00000053856 1700123L14RikQ3V2K7 440 aa15.03■□□□□ -0
Pcdhb17-201ENSMUST00000053856 ScribQ80U72 1612 aa15.01□□□□□ -0.01
Pcdhb17-201ENSMUST00000053856 Wdr43Q6ZQL4 677 aaKnown RBP15.01□□□□□ -0.01
Pcdhb17-201ENSMUST00000053856 Cttnbp2B9EJA2 1648 aa14.99□□□□□ -0.01
Pcdhb17-201ENSMUST00000053856 Dhx29Q6PGC1 1365 aaKnown RBP14.99□□□□□ -0.01
Pcdhb17-201ENSMUST00000053856 HdgfP51859 237 aaKnown RBP14.98□□□□□ -0.01
Pcdhb17-201ENSMUST00000053856 Chmp4bQ9D8B3 224 aaKnown RBP14.98□□□□□ -0.01
Pcdhb17-201ENSMUST00000053856 WrnO09053 1401 aa14.97□□□□□ -0.01
Pcdhb17-201ENSMUST00000053856 Mrs2Q5NCE8 434 aa14.96□□□□□ -0.01
Pcdhb17-201ENSMUST00000053856 Map4P27546 1125 aaKnown RBP14.96□□□□□ -0.01
Pcdhb17-201ENSMUST00000053856 Card11Q8CIS0 1159 aa14.96□□□□□ -0.01
Pcdhb17-201ENSMUST00000053856 Arid3cA6PWV5 409 aa14.96□□□□□ -0.02
Pcdhb17-201ENSMUST00000053856 Kdm2aP59997 1161 aa14.95□□□□□ -0.02
Pcdhb17-201ENSMUST00000053856 Stard8Q8K031 1019 aa14.94□□□□□ -0.02
Pcdhb17-201ENSMUST00000053856 ArxO35085 564 aa14.93□□□□□ -0.02
Pcdhb17-201ENSMUST00000053856 Iqgap2Q3UQ44 1575 aa14.93□□□□□ -0.02
Pcdhb17-201ENSMUST00000053856 Stag3O70576 1240 aa14.92□□□□□ -0.02
Pcdhb17-201ENSMUST00000053856 Cecr2E9Q2Z1 1453 aa14.91□□□□□ -0.02
Pcdhb17-201ENSMUST00000053856 Fgd1P52734 960 aa14.91□□□□□ -0.02
Pcdhb17-201ENSMUST00000053856 Aebp2Q9Z248 504 aaKnown RBP14.91□□□□□ -0.02
Pcdhb17-201ENSMUST00000053856 Stk24Q99KH8 431 aa14.9□□□□□ -0.02
Pcdhb17-201ENSMUST00000053856 Ccdc9Q8VC31 543 aaKnown RBP14.9□□□□□ -0.02
Pcdhb17-201ENSMUST00000053856 Eif4g2Q62448 906 aaKnown RBP14.89□□□□□ -0.03
Pcdhb17-201ENSMUST00000053856 Efcab5A0JP43 1406 aa14.89□□□□□ -0.03
Pcdhb17-201ENSMUST00000053856 Ncoa2Q61026 1462 aa14.88□□□□□ -0.03
Pcdhb17-201ENSMUST00000053856 Mapk8ip3Q9ESN9 1337 aa14.87□□□□□ -0.03
Pcdhb17-201ENSMUST00000053856 NudcO35685 332 aaKnown RBP14.87□□□□□ -0.03
Pcdhb17-201ENSMUST00000053856 Ccdc88bQ4QRL3 1481 aa14.86□□□□□ -0.03
Pcdhb17-201ENSMUST00000053856 Synj1Q8CHC4 1574 aa14.86□□□□□ -0.03
Pcdhb17-201ENSMUST00000053856 Arhgap35Q91YM2 1499 aa14.85□□□□□ -0.03
Pcdhb17-201ENSMUST00000053856 Soga1E1U8D0 1418 aa14.85□□□□□ -0.03
Pcdhb17-201ENSMUST00000053856 Fam71e1A1L3C1 212 aa14.84□□□□□ -0.03
Pcdhb17-201ENSMUST00000053856 Grwd1Q810D6 446 aaKnown RBP14.83□□□□□ -0.04
Pcdhb17-201ENSMUST00000053856 Hsp90aa1P07901 733 aaKnown RBP14.83□□□□□ -0.04
Pcdhb17-201ENSMUST00000053856 Plekhh2Q8C115 1491 aa14.82□□□□□ -0.04
Pcdhb17-201ENSMUST00000053856 UacaQ8CGB3 1411 aa14.81□□□□□ -0.04
Pcdhb17-201ENSMUST00000053856 Rad21Q61550 635 aaKnown RBP14.81□□□□□ -0.04
Pcdhb17-201ENSMUST00000053856 Jph4Q80WT0 628 aa14.81□□□□□ -0.04
Pcdhb17-201ENSMUST00000053856 Fhad1A6PWD2 1420 aa14.8□□□□□ -0.04
Pcdhb17-201ENSMUST00000053856 Psme1P97371 249 aa14.79□□□□□ -0.04
Pcdhb17-201ENSMUST00000053856 Gtf2e1Q9D0D5 440 aa14.79□□□□□ -0.04
Pcdhb17-201ENSMUST00000053856 Polr1aO35134 1717 aaKnown RBP14.78□□□□□ -0.04
Pcdhb17-201ENSMUST00000053856 MlecQ6ZQI3 291 aaKnown RBP14.77□□□□□ -0.05
Pcdhb17-201ENSMUST00000053856 Pkd2O35245 966 aa14.77□□□□□ -0.05
Pcdhb17-201ENSMUST00000053856 Kif3bQ61771 747 aa14.75□□□□□ -0.05
Pcdhb17-201ENSMUST00000053856 Mrc2Q64449 1479 aa14.75□□□□□ -0.05
Pcdhb17-201ENSMUST00000053856 Txndc2Q6P902 515 aa14.75□□□□□ -0.05
Pcdhb17-201ENSMUST00000053856 Sart1Q9Z315 806 aaKnown RBP14.75□□□□□ -0.05
Pcdhb17-201ENSMUST00000053856 Nup155Q99P88 1391 aaKnown RBP14.75□□□□□ -0.05
Pcdhb17-201ENSMUST00000053856 Cabp1Q9JLK7 227 aa14.73□□□□□ -0.05
Pcdhb17-201ENSMUST00000053856 Ccnb3Q810T2 1396 aa14.72□□□□□ -0.05
Pcdhb17-201ENSMUST00000053856 Fgd6Q69ZL1 1399 aa14.72□□□□□ -0.05
Pcdhb17-201ENSMUST00000053856 CanxP35564 591 aaKnown RBP14.71□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms