RNA–Protein interactions for RNA: ENSMUST00000046916.8

Ckap2-201, Transcript of Cytoskeleton-associated protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2, Length 2,593 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2-201ENSMUST00000046916 Adamts12Q811B3 1600 aa17.95■□□□□ 0.46
Ckap2-201ENSMUST00000046916 Rad54l2Q99NG0 1466 aa17.94■□□□□ 0.46
Ckap2-201ENSMUST00000046916 Arhgef5E9Q7D5 1581 aa17.93■□□□□ 0.46
Ckap2-201ENSMUST00000046916 PtprkP35822 1457 aa17.91■□□□□ 0.46
Ckap2-201ENSMUST00000046916 Ehmt2Q9Z148 1263 aaKnown RBP17.91■□□□□ 0.46
Ckap2-201ENSMUST00000046916 Chd1P40201 1711 aa17.91■□□□□ 0.46
Ckap2-201ENSMUST00000046916 CadpsQ80TJ1 1355 aa17.91■□□□□ 0.46
Ckap2-201ENSMUST00000046916 TchhA0A0B4J1F9 1599 aa17.9■□□□□ 0.46
Ckap2-201ENSMUST00000046916 Gapvd1Q6PAR5 1458 aa17.9■□□□□ 0.46
Ckap2-201ENSMUST00000046916 Abcc1O35379 1528 aa17.89■□□□□ 0.45
Ckap2-201ENSMUST00000046916 Abca16E9PWJ7 1678 aa17.89■□□□□ 0.45
Ckap2-201ENSMUST00000046916 Neo1P97798 1493 aa17.86■□□□□ 0.45
Ckap2-201ENSMUST00000046916 Mroh2bQ7M6Y6 1581 aa17.85■□□□□ 0.45
Ckap2-201ENSMUST00000046916 Map3k1P53349 1493 aa17.85■□□□□ 0.45
Ckap2-201ENSMUST00000046916 Abcc2Q8VI47 1543 aa17.85■□□□□ 0.45
Ckap2-201ENSMUST00000046916 Arhgef12Q8R4H2 1543 aaKnown RBP17.85■□□□□ 0.45
Ckap2-201ENSMUST00000046916 Polr1aO35134 1717 aaKnown RBP17.8■□□□□ 0.44
Ckap2-201ENSMUST00000046916 Setbp1Q9Z180 1582 aa17.79■□□□□ 0.44
Ckap2-201ENSMUST00000046916 PtprtQ99M80 1454 aa17.79■□□□□ 0.44
Ckap2-201ENSMUST00000046916 Pprc1Q6NZN1 1644 aa17.76■□□□□ 0.43
Ckap2-201ENSMUST00000046916 Abca5Q8K448 1642 aa17.76■□□□□ 0.43
Ckap2-201ENSMUST00000046916 WizO88286 1684 aaKnown RBP17.76■□□□□ 0.43
Ckap2-201ENSMUST00000046916 BC005561E9Q5E2 1589 aa17.74■□□□□ 0.43
Ckap2-201ENSMUST00000046916 Slx4Q6P1D7 1565 aa17.74■□□□□ 0.43
Ckap2-201ENSMUST00000046916 Pelp1Q9DBD5 1123 aaKnown RBP17.74■□□□□ 0.43
Ckap2-201ENSMUST00000046916 Rpap1Q80TE0 1409 aa17.73■□□□□ 0.43
Ckap2-201ENSMUST00000046916 Rapgef2Q8CHG7 1496 aa17.73■□□□□ 0.43
Ckap2-201ENSMUST00000046916 Eif4g1Q6NZJ6 1600 aaKnown RBP17.72■□□□□ 0.43
Ckap2-201ENSMUST00000046916 Carmil1Q6EDY6 1374 aa17.72■□□□□ 0.43
Ckap2-201ENSMUST00000046916 Pcgf6Q99NA9 353 aa17.72■□□□□ 0.43
Ckap2-201ENSMUST00000046916 AI481877A2ALV5 1481 aa17.7■□□□□ 0.42
Ckap2-201ENSMUST00000046916 Rrbp1Q99PL5 1605 aaKnown RBP17.7■□□□□ 0.42
Ckap2-201ENSMUST00000046916 Ythdc2B2RR83 1445 aaKnown RBP17.69■□□□□ 0.42
Ckap2-201ENSMUST00000046916 Gm156Q58A37 223 aa17.69■□□□□ 0.42
Ckap2-201ENSMUST00000046916 Gm14025A2AP89 1413 aa17.67■□□□□ 0.42
Ckap2-201ENSMUST00000046916 Soga1E1U8D0 1418 aa17.67■□□□□ 0.42
Ckap2-201ENSMUST00000046916 PxdnQ3UQ28 1475 aa17.66■□□□□ 0.42
Ckap2-201ENSMUST00000046916 AknaQ80VW7 1404 aa17.62■□□□□ 0.41
Ckap2-201ENSMUST00000046916 Chic1Q8CBW7 227 aa17.61■□□□□ 0.41
Ckap2-201ENSMUST00000046916 Clasp1Q80TV8 1535 aaKnown RBP17.61■□□□□ 0.41
Ckap2-201ENSMUST00000046916 Arhgap35Q91YM2 1499 aa17.59■□□□□ 0.41
Ckap2-201ENSMUST00000046916 Gm7298A0A0N4SVU1 1476 aa17.58■□□□□ 0.4
Ckap2-201ENSMUST00000046916 Kiaa1210E9Q0C6 1637 aa17.57■□□□□ 0.4
Ckap2-201ENSMUST00000046916 Kdm5bQ80Y84 1544 aa17.56■□□□□ 0.4
Ckap2-201ENSMUST00000046916 Ak9G3UYQ4 1894 aa17.55■□□□□ 0.4
Ckap2-201ENSMUST00000046916 AdgbG3UZ78 1657 aa17.54■□□□□ 0.4
Ckap2-201ENSMUST00000046916 Igf1rQ60751 1373 aa17.52■□□□□ 0.4
Ckap2-201ENSMUST00000046916 Ttc37F8VPK0 1563 aa17.52■□□□□ 0.39
Ckap2-201ENSMUST00000046916 Wdr7Q920I9 1489 aa17.47■□□□□ 0.39
Ckap2-201ENSMUST00000046916 Fyco1Q8VDC1 1437 aa17.47■□□□□ 0.39
Ckap2-201ENSMUST00000046916 NhsB1AV60 1647 aa17.47■□□□□ 0.39
Ckap2-201ENSMUST00000046916 Arhgef11Q68FM7 1552 aa17.46■□□□□ 0.39
Ckap2-201ENSMUST00000046916 Jph4Q80WT0 628 aa17.44■□□□□ 0.38
Ckap2-201ENSMUST00000046916 Mapkbp1Q6NS57 1503 aa17.44■□□□□ 0.38
Ckap2-201ENSMUST00000046916 Arhgap27A2AB59 869 aa17.43■□□□□ 0.38
Ckap2-201ENSMUST00000046916 Cul7Q8VE73 1689 aa17.41■□□□□ 0.38
Ckap2-201ENSMUST00000046916 Clip1Q922J3 1391 aa17.41■□□□□ 0.38
Ckap2-201ENSMUST00000046916 Cep162Q6ZQ06 1403 aa17.39■□□□□ 0.37
Ckap2-201ENSMUST00000046916 Cux1P53564 1515 aa17.39■□□□□ 0.37
Ckap2-201ENSMUST00000046916 Lrrc9Q8CDN9 1456 aa17.39■□□□□ 0.37
Ckap2-201ENSMUST00000046916 AglF8VPN4 1532 aa17.37■□□□□ 0.37
Ckap2-201ENSMUST00000046916 Erich3F6QRE9 1637 aa17.36■□□□□ 0.37
Ckap2-201ENSMUST00000046916 Zfyve16Q80U44 1528 aa17.36■□□□□ 0.37
Ckap2-201ENSMUST00000046916 Ttbk1Q6PCN3 1308 aa17.36■□□□□ 0.37
Ckap2-201ENSMUST00000046916 Zeb1Q64318 1117 aa17.35■□□□□ 0.37
Ckap2-201ENSMUST00000046916 BlmO88700 1416 aa17.35■□□□□ 0.37
Ckap2-201ENSMUST00000046916 Gcc2Q8CHG3 1679 aa17.35■□□□□ 0.37
Ckap2-201ENSMUST00000046916 Pcdh10E9PXQ7 1057 aa17.33■□□□□ 0.36
Ckap2-201ENSMUST00000046916 Ccdc141E9Q8Q6 1531 aa17.31■□□□□ 0.36
Ckap2-201ENSMUST00000046916 Ankrd26Q811D2 1581 aa17.31■□□□□ 0.36
Ckap2-201ENSMUST00000046916 Ncoa2Q61026 1462 aa17.31■□□□□ 0.36
Ckap2-201ENSMUST00000046916 Npm2Q80W85 207 aa17.31■□□□□ 0.36
Ckap2-201ENSMUST00000046916 WrnO09053 1401 aa17.3■□□□□ 0.36
Ckap2-201ENSMUST00000046916 Supt5hO55201 1082 aaKnown RBP17.3■□□□□ 0.36
Ckap2-201ENSMUST00000046916 Abca8bQ8K440 1620 aa17.29■□□□□ 0.36
Ckap2-201ENSMUST00000046916 Rapgef6Q5NCJ1 1609 aa17.28■□□□□ 0.36
Ckap2-201ENSMUST00000046916 Lmo7E9PYF4 1699 aaKnown RBP17.25■□□□□ 0.35
Ckap2-201ENSMUST00000046916 Fancd2Q80V62 1450 aa17.22■□□□□ 0.35
Ckap2-201ENSMUST00000046916 Kiaa0556Q8C753 1610 aa17.22■□□□□ 0.35
Ckap2-201ENSMUST00000046916 Mroh2aD3Z750 1679 aa17.21■□□□□ 0.35
Ckap2-201ENSMUST00000046916 Arhgap31A6X8Z5 1425 aa17.21■□□□□ 0.35
Ckap2-201ENSMUST00000046916 Arap1Q4LDD4 1452 aa17.19■□□□□ 0.34
Ckap2-201ENSMUST00000046916 Alpk3Q924C5 1678 aa17.17■□□□□ 0.34
Ckap2-201ENSMUST00000046916 Ncapd3Q6ZQK0 1506 aa17.16■□□□□ 0.34
Ckap2-201ENSMUST00000046916 Atp10dQ8K2X1 1416 aa17.16■□□□□ 0.34
Ckap2-201ENSMUST00000046916 Depdc5P61460 1591 aa17.15■□□□□ 0.34
Ckap2-201ENSMUST00000046916 Ppp1r18Q8BQ30 594 aa17.14■□□□□ 0.33
Ckap2-201ENSMUST00000046916 Peg3Q3URU2 1571 aa17.14■□□□□ 0.33
Ckap2-201ENSMUST00000046916 Fam208aQ69ZR9 1610 aaKnown RBP17.13■□□□□ 0.33
Ckap2-201ENSMUST00000046916 Dhx57Q6P5D3 1388 aaKnown RBP17.11■□□□□ 0.33
Ckap2-201ENSMUST00000046916 Magi1Q6RHR9 1471 aa17.11■□□□□ 0.33
Ckap2-201ENSMUST00000046916 Neurod1Q60867 357 aa17.1■□□□□ 0.33
Ckap2-201ENSMUST00000046916 Fndc1E9Q043 1732 aa17.1■□□□□ 0.33
Ckap2-201ENSMUST00000046916 Rnf17Q99MV7 1640 aa17.09■□□□□ 0.33
Ckap2-201ENSMUST00000046916 Kiaa1551Q5DTW7 1521 aa17.09■□□□□ 0.33
Ckap2-201ENSMUST00000046916 Znf608Q56A10 1511 aa17.08■□□□□ 0.33
Ckap2-201ENSMUST00000046916 Fam163aQ8CAA5 168 aa17.08■□□□□ 0.32
Ckap2-201ENSMUST00000046916 NefmP08553 848 aa17.06■□□□□ 0.32
Ckap2-201ENSMUST00000046916 Cdc42bpaQ3UU96 1719 aa17.04■□□□□ 0.32
Ckap2-201ENSMUST00000046916 Pcf11G3X9Z4 1553 aa17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms