RNA–Protein interactions for RNA: ENSMUST00000042617.13

Clcnka-201, Transcript of Chloride channel protein ClC-Ka, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcnka, Length 2,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcnka-201ENSMUST00000042617 Tnnt3Q9QZ47 272 aa20.96■□□□□ 0.95
Clcnka-201ENSMUST00000042617 NrkQ9R0G8 1455 aa20.96■□□□□ 0.95
Clcnka-201ENSMUST00000042617 Lrriq1Q0P5X1 1673 aa20.96■□□□□ 0.95
Clcnka-201ENSMUST00000042617 Shroom4Q1W617 1475 aa20.93■□□□□ 0.94
Clcnka-201ENSMUST00000042617 Crocc2F6XLV1 1638 aa20.93■□□□□ 0.94
Clcnka-201ENSMUST00000042617 Ncapd3Q6ZQK0 1506 aa20.93■□□□□ 0.94
Clcnka-201ENSMUST00000042617 Plb1Q3TTY0 1478 aa20.91■□□□□ 0.94
Clcnka-201ENSMUST00000042617 Urb2E9Q7L1 1524 aaKnown RBP20.89■□□□□ 0.93
Clcnka-201ENSMUST00000042617 Fam71e1A1L3C1 212 aa20.88■□□□□ 0.93
Clcnka-201ENSMUST00000042617 Samd9lQ69Z37 1561 aa20.88■□□□□ 0.93
Clcnka-201ENSMUST00000042617 Arhgap35Q91YM2 1499 aa20.87■□□□□ 0.93
Clcnka-201ENSMUST00000042617 Efcab5A0JP43 1406 aa20.85■□□□□ 0.93
Clcnka-201ENSMUST00000042617 Hnrnpul2Q00PI9 745 aaKnown RBP20.84■□□□□ 0.93
Clcnka-201ENSMUST00000042617 Bcl11aQ9QYE3 773 aa20.82■□□□□ 0.92
Clcnka-201ENSMUST00000042617 Plekhg3Q4VAC9 1341 aa20.82■□□□□ 0.92
Clcnka-201ENSMUST00000042617 Clip1Q922J3 1391 aa20.81■□□□□ 0.92
Clcnka-201ENSMUST00000042617 Rad54l2Q99NG0 1466 aa20.77■□□□□ 0.92
Clcnka-201ENSMUST00000042617 SafbD3YXK2 937 aaKnown RBP20.75■□□□□ 0.91
Clcnka-201ENSMUST00000042617 Mroh2bQ7M6Y6 1581 aa20.71■□□□□ 0.91
Clcnka-201ENSMUST00000042617 Map3k1P53349 1493 aa20.7■□□□□ 0.9
Clcnka-201ENSMUST00000042617 Setd1bQ8CFT2 1985 aa20.69■□□□□ 0.9
Clcnka-201ENSMUST00000042617 Disp1Q3TDN0 1521 aa20.69■□□□□ 0.9
Clcnka-201ENSMUST00000042617 Mapk8ip2Q9ERE9 830 aa20.69■□□□□ 0.9
Clcnka-201ENSMUST00000042617 Kdm5bQ80Y84 1544 aa20.68■□□□□ 0.9
Clcnka-201ENSMUST00000042617 Eea1Q8BL66 1411 aa20.65■□□□□ 0.9
Clcnka-201ENSMUST00000042617 SynmQ70IV5 1561 aa20.64■□□□□ 0.89
Clcnka-201ENSMUST00000042617 Magi3Q9EQJ9 1476 aa20.62■□□□□ 0.89
Clcnka-201ENSMUST00000042617 Ift140E9PY46 1464 aa20.61■□□□□ 0.89
Clcnka-201ENSMUST00000042617 Anp32aO35381 247 aa20.6■□□□□ 0.89
Clcnka-201ENSMUST00000042617 Arap1Q4LDD4 1452 aa20.6■□□□□ 0.89
Clcnka-201ENSMUST00000042617 Setd5Q5XJV7 1441 aa20.58■□□□□ 0.89
Clcnka-201ENSMUST00000042617 Ap3b1Q9Z1T1 1105 aa20.58■□□□□ 0.88
Clcnka-201ENSMUST00000042617 Grin2aP35436 1464 aa20.57■□□□□ 0.88
Clcnka-201ENSMUST00000042617 Pla2r1Q62028 1487 aa20.57■□□□□ 0.88
Clcnka-201ENSMUST00000042617 Eif4g3Q80XI3 1579 aaKnown RBP20.57■□□□□ 0.88
Clcnka-201ENSMUST00000042617 Dnajc5P60904 198 aa20.55■□□□□ 0.88
Clcnka-201ENSMUST00000042617 Znf710Q3U288 666 aa20.55■□□□□ 0.88
Clcnka-201ENSMUST00000042617 Stra8P70278 393 aa20.53■□□□□ 0.88
Clcnka-201ENSMUST00000042617 Rpap1Q80TE0 1409 aa20.52■□□□□ 0.88
Clcnka-201ENSMUST00000042617 Nup160Q9Z0W3 1402 aaKnown RBP20.52■□□□□ 0.88
Clcnka-201ENSMUST00000042617 Arhgef5E9Q7D5 1581 aa20.52■□□□□ 0.87
Clcnka-201ENSMUST00000042617 Rtl5Q5DTT4 599 aa20.51■□□□□ 0.87
Clcnka-201ENSMUST00000042617 AqrQ8CFQ3 1481 aaKnown RBP20.51■□□□□ 0.87
Clcnka-201ENSMUST00000042617 TchhA0A0B4J1F9 1599 aa20.49■□□□□ 0.87
Clcnka-201ENSMUST00000042617 Carmil1Q6EDY6 1374 aa20.48■□□□□ 0.87
Clcnka-201ENSMUST00000042617 Ankrd26Q811D2 1581 aa20.46■□□□□ 0.87
Clcnka-201ENSMUST00000042617 Eid3Q3V124 375 aa20.45■□□□□ 0.86
Clcnka-201ENSMUST00000042617 Rusc2Q80U22 1514 aa20.45■□□□□ 0.86
Clcnka-201ENSMUST00000042617 Erich3F6QRE9 1637 aa20.44■□□□□ 0.86
Clcnka-201ENSMUST00000042617 Cux1P53564 1515 aa20.44■□□□□ 0.86
Clcnka-201ENSMUST00000042617 Pbrm1Q8BSQ9 1634 aaKnown RBP20.43■□□□□ 0.86
Clcnka-201ENSMUST00000042617 EprsQ8CGC7 1512 aaKnown RBP20.41■□□□□ 0.86
Clcnka-201ENSMUST00000042617 Tiam1Q60610 1591 aa20.39■□□□□ 0.85
Clcnka-201ENSMUST00000042617 WizO88286 1684 aaKnown RBP20.38■□□□□ 0.85
Clcnka-201ENSMUST00000042617 Cc2d2bA0A286YDU8 1405 aa20.37■□□□□ 0.85
Clcnka-201ENSMUST00000042617 PxdnQ3UQ28 1475 aa20.34■□□□□ 0.85
Clcnka-201ENSMUST00000042617 Pcf11G3X9Z4 1553 aa20.34■□□□□ 0.85
Clcnka-201ENSMUST00000042617 Naip1Q9QWK5 1403 aa20.34■□□□□ 0.85
Clcnka-201ENSMUST00000042617 Gpatch8A2A6A1 1505 aa20.32■□□□□ 0.84
Clcnka-201ENSMUST00000042617 Calr4Q3TQS0 420 aa20.32■□□□□ 0.84
Clcnka-201ENSMUST00000042617 Abca16E9PWJ7 1678 aa20.31■□□□□ 0.84
Clcnka-201ENSMUST00000042617 Adamts12Q811B3 1600 aa20.31■□□□□ 0.84
Clcnka-201ENSMUST00000042617 UacaQ8CGB3 1411 aa20.31■□□□□ 0.84
Clcnka-201ENSMUST00000042617 Nolc1E9Q5C9 702 aaKnown RBP20.31■□□□□ 0.84
Clcnka-201ENSMUST00000042617 BlmO88700 1416 aa20.3■□□□□ 0.84
Clcnka-201ENSMUST00000042617 Lmo7E9PYF4 1699 aaKnown RBP20.3■□□□□ 0.84
Clcnka-201ENSMUST00000042617 CadpsQ80TJ1 1355 aa20.3■□□□□ 0.84
Clcnka-201ENSMUST00000042617 Pelp1Q9DBD5 1123 aaKnown RBP20.28■□□□□ 0.84
Clcnka-201ENSMUST00000042617 Slx4Q6P1D7 1565 aa20.27■□□□□ 0.84
Clcnka-201ENSMUST00000042617 Gm7298A0A0N4SVU1 1476 aa20.26■□□□□ 0.83
Clcnka-201ENSMUST00000042617 Abcc2Q8VI47 1543 aa20.25■□□□□ 0.83
Clcnka-201ENSMUST00000042617 Polr1aO35134 1717 aaKnown RBP20.25■□□□□ 0.83
Clcnka-201ENSMUST00000042617 Fyco1Q8VDC1 1437 aa20.24■□□□□ 0.83
Clcnka-201ENSMUST00000042617 Ifnlr1Q8CGK5 535 aa20.24■□□□□ 0.83
Clcnka-201ENSMUST00000042617 Arhgap27A2AB59 869 aa20.23■□□□□ 0.83
Clcnka-201ENSMUST00000042617 CntlnA2AM05 1397 aa20.23■□□□□ 0.83
Clcnka-201ENSMUST00000042617 Gm13697A2AK42 830 aa20.21■□□□□ 0.83
Clcnka-201ENSMUST00000042617 NclP09405 707 aaKnown RBP20.21■□□□□ 0.83
Clcnka-201ENSMUST00000042617 Abca5Q8K448 1642 aa20.2■□□□□ 0.82
Clcnka-201ENSMUST00000042617 Lmod2Q3UHZ5 550 aa20.18■□□□□ 0.82
Clcnka-201ENSMUST00000042617 Supt16hQ920B9 1047 aa20.18■□□□□ 0.82
Clcnka-201ENSMUST00000042617 PrkcshO08795 521 aa20.16■□□□□ 0.82
Clcnka-201ENSMUST00000042617 Aebp1Q640N1 1128 aa20.16■□□□□ 0.82
Clcnka-201ENSMUST00000042617 Soga1E1U8D0 1418 aa20.15■□□□□ 0.82
Clcnka-201ENSMUST00000042617 Ankrd36D3Z4K0 1415 aa20.14■□□□□ 0.82
Clcnka-201ENSMUST00000042617 Washc2Q6PGL7 1334 aa20.13■□□□□ 0.81
Clcnka-201ENSMUST00000042617 Peg3Q3URU2 1571 aa20.13■□□□□ 0.81
Clcnka-201ENSMUST00000042617 Camsap2Q8C1B1 1461 aa20.12■□□□□ 0.81
Clcnka-201ENSMUST00000042617 BC005561E9Q5E2 1589 aa20.11■□□□□ 0.81
Clcnka-201ENSMUST00000042617 Dnmt1P13864 1620 aaKnown RBP20.11■□□□□ 0.81
Clcnka-201ENSMUST00000042617 Fgd6Q69ZL1 1399 aa20.1■□□□□ 0.81
Clcnka-201ENSMUST00000042617 AknaQ80VW7 1404 aa20.09■□□□□ 0.81
Clcnka-201ENSMUST00000042617 Fam50aQ9WV03 339 aaKnown RBP20.09■□□□□ 0.81
Clcnka-201ENSMUST00000042617 Smg6P61406 1418 aaKnown RBP20.09■□□□□ 0.81
Clcnka-201ENSMUST00000042617 Shroom2A2ALU4 1481 aa20.08■□□□□ 0.81
Clcnka-201ENSMUST00000042617 WrnO09053 1401 aa20.08■□□□□ 0.81
Clcnka-201ENSMUST00000042617 Neo1P97798 1493 aa20.06■□□□□ 0.8
Clcnka-201ENSMUST00000042617 Map3k4O08648 1597 aa20.06■□□□□ 0.8
Clcnka-201ENSMUST00000042617 Ccer2J3QPU5 274 aa20.05■□□□□ 0.8
Clcnka-201ENSMUST00000042617 Ncoa2Q61026 1462 aa20.04■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms