RNA–Protein interactions for RNA: ENSMUST00000038421.7

Lsm1-201, Transcript of U6 snRNA-associated Sm-like protein LSm1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lsm1, Length 2,663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1-201ENSMUST00000038421 Tnnt3Q9QZ47 272 aa23.96■■□□□ 1.43
Lsm1-201ENSMUST00000038421 SafbD3YXK2 937 aaKnown RBP23.95■■□□□ 1.42
Lsm1-201ENSMUST00000038421 Naip1Q9QWK5 1403 aa23.94■■□□□ 1.42
Lsm1-201ENSMUST00000038421 AqrQ8CFQ3 1481 aaKnown RBP23.93■■□□□ 1.42
Lsm1-201ENSMUST00000038421 Camsap1A2AHC3 1581 aa23.93■■□□□ 1.42
Lsm1-201ENSMUST00000038421 Fam50aQ9WV03 339 aaKnown RBP23.92■■□□□ 1.42
Lsm1-201ENSMUST00000038421 Wdr62Q3U3T8 1523 aa23.91■■□□□ 1.42
Lsm1-201ENSMUST00000038421 NclP09405 707 aaKnown RBP23.87■■□□□ 1.41
Lsm1-201ENSMUST00000038421 Rpap1Q80TE0 1409 aa23.86■■□□□ 1.41
Lsm1-201ENSMUST00000038421 Erich3F6QRE9 1637 aa23.86■■□□□ 1.41
Lsm1-201ENSMUST00000038421 Ankrd26Q811D2 1581 aa23.85■■□□□ 1.41
Lsm1-201ENSMUST00000038421 Mroh2bQ7M6Y6 1581 aa23.85■■□□□ 1.41
Lsm1-201ENSMUST00000038421 Slx4Q6P1D7 1565 aa23.84■■□□□ 1.41
Lsm1-201ENSMUST00000038421 Pcf11G3X9Z4 1553 aa23.81■■□□□ 1.4
Lsm1-201ENSMUST00000038421 Lmod2Q3UHZ5 550 aa23.81■■□□□ 1.4
Lsm1-201ENSMUST00000038421 Grin2bQ01097 1482 aa23.81■■□□□ 1.4
Lsm1-201ENSMUST00000038421 Fam71e1A1L3C1 212 aa23.77■■□□□ 1.4
Lsm1-201ENSMUST00000038421 Unc13aQ4KUS2 1712 aa23.75■■□□□ 1.39
Lsm1-201ENSMUST00000038421 Znf710Q3U288 666 aa23.73■■□□□ 1.39
Lsm1-201ENSMUST00000038421 Hspa5P20029 655 aaKnown RBP23.7■■□□□ 1.38
Lsm1-201ENSMUST00000038421 3425401B19RikD3Z1D3 1412 aa23.69■■□□□ 1.38
Lsm1-201ENSMUST00000038421 Stra8P70278 393 aa23.68■■□□□ 1.38
Lsm1-201ENSMUST00000038421 UacaQ8CGB3 1411 aa23.68■■□□□ 1.38
Lsm1-201ENSMUST00000038421 Lmo7E9PYF4 1699 aaKnown RBP23.66■■□□□ 1.38
Lsm1-201ENSMUST00000038421 Ercc6F8VPZ5 1481 aa23.64■■□□□ 1.37
Lsm1-201ENSMUST00000038421 CntlnA2AM05 1397 aa23.64■■□□□ 1.37
Lsm1-201ENSMUST00000038421 Cux1P53564 1515 aa23.62■■□□□ 1.37
Lsm1-201ENSMUST00000038421 Gm13697A2AK42 830 aa23.61■■□□□ 1.37
Lsm1-201ENSMUST00000038421 Fhad1A6PWD2 1420 aa23.6■■□□□ 1.37
Lsm1-201ENSMUST00000038421 Ankrd36D3Z4K0 1415 aa23.6■■□□□ 1.37
Lsm1-201ENSMUST00000038421 Fyco1Q8VDC1 1437 aa23.57■■□□□ 1.36
Lsm1-201ENSMUST00000038421 Dhx29Q6PGC1 1365 aaKnown RBP23.57■■□□□ 1.36
Lsm1-201ENSMUST00000038421 Mia2Q91ZV0 1396 aa23.57■■□□□ 1.36
Lsm1-201ENSMUST00000038421 Ccer2J3QPU5 274 aa23.57■■□□□ 1.36
Lsm1-201ENSMUST00000038421 Carmil1Q6EDY6 1374 aa23.56■■□□□ 1.36
Lsm1-201ENSMUST00000038421 Vps8Q0P5W1 1427 aa23.52■■□□□ 1.36
Lsm1-201ENSMUST00000038421 Anp32aO35381 247 aa23.49■■□□□ 1.35
Lsm1-201ENSMUST00000038421 Urb2E9Q7L1 1524 aaKnown RBP23.47■■□□□ 1.35
Lsm1-201ENSMUST00000038421 Peg3Q3URU2 1571 aa23.47■■□□□ 1.35
Lsm1-201ENSMUST00000038421 Sin3aQ60520 1274 aaKnown RBP23.46■■□□□ 1.35
Lsm1-201ENSMUST00000038421 Ube2uB1AUC4 352 aa23.46■■□□□ 1.35
Lsm1-201ENSMUST00000038421 Naip2Q9QUK4 1447 aa23.46■■□□□ 1.35
Lsm1-201ENSMUST00000038421 Efcab5A0JP43 1406 aa23.45■■□□□ 1.34
Lsm1-201ENSMUST00000038421 Npm1Q61937 292 aaKnown RBP23.44■■□□□ 1.34
Lsm1-201ENSMUST00000038421 Aebp1Q640N1 1128 aa23.44■■□□□ 1.34
Lsm1-201ENSMUST00000038421 Cux2P70298 1426 aa23.44■■□□□ 1.34
Lsm1-201ENSMUST00000038421 Slc24a1Q91WD8 1130 aa23.43■■□□□ 1.34
Lsm1-201ENSMUST00000038421 Gm7298A0A0N4SVU1 1476 aa23.43■■□□□ 1.34
Lsm1-201ENSMUST00000038421 Calr4Q3TQS0 420 aa23.43■■□□□ 1.34
Lsm1-201ENSMUST00000038421 Crocc2F6XLV1 1638 aa23.42■■□□□ 1.34
Lsm1-201ENSMUST00000038421 Gm1043A0A140LJC2 1431 aa23.4■■□□□ 1.34
Lsm1-201ENSMUST00000038421 Smg6P61406 1418 aaKnown RBP23.39■■□□□ 1.34
Lsm1-201ENSMUST00000038421 Chic2Q9D9G3 165 aa23.36■■□□□ 1.33
Lsm1-201ENSMUST00000038421 A2mQ6GQT1 1474 aa23.36■■□□□ 1.33
Lsm1-201ENSMUST00000038421 Camsap2Q8C1B1 1461 aa23.36■■□□□ 1.33
Lsm1-201ENSMUST00000038421 Duox2A2AQ99 1517 aa23.36■■□□□ 1.33
Lsm1-201ENSMUST00000038421 LrpprcQ6PB66 1392 aaKnown RBP23.35■■□□□ 1.33
Lsm1-201ENSMUST00000038421 Naip5Q9R016 1403 aa23.34■■□□□ 1.33
Lsm1-201ENSMUST00000038421 Nolc1E9Q5C9 702 aaKnown RBP23.33■■□□□ 1.33
Lsm1-201ENSMUST00000038421 PogzQ8BZH4 1409 aaKnown RBP23.31■■□□□ 1.32
Lsm1-201ENSMUST00000038421 Ncoa2Q61026 1462 aa23.31■■□□□ 1.32
Lsm1-201ENSMUST00000038421 Dennd4bQ3U1Y4 1499 aa23.28■■□□□ 1.32
Lsm1-201ENSMUST00000038421 Ubl4bQ9CQ84 188 aa23.28■■□□□ 1.32
Lsm1-201ENSMUST00000038421 Phldb1Q6PDH0 1371 aaKnown RBP23.28■■□□□ 1.32
Lsm1-201ENSMUST00000038421 SynmQ70IV5 1561 aa23.27■■□□□ 1.32
Lsm1-201ENSMUST00000038421 Ccnb3Q810T2 1396 aa23.26■■□□□ 1.31
Lsm1-201ENSMUST00000038421 Cul7Q8VE73 1689 aa23.26■■□□□ 1.31
Lsm1-201ENSMUST00000038421 Polr1aO35134 1717 aaKnown RBP23.23■■□□□ 1.31
Lsm1-201ENSMUST00000038421 Samd9lQ69Z37 1561 aa23.22■■□□□ 1.31
Lsm1-201ENSMUST00000038421 Rad54l2Q99NG0 1466 aa23.19■■□□□ 1.3
Lsm1-201ENSMUST00000038421 Eif5bQ05D44 1216 aaKnown RBP23.17■■□□□ 1.3
Lsm1-201ENSMUST00000038421 Mphosph9A6H5Y1 991 aa23.15■■□□□ 1.3
Lsm1-201ENSMUST00000038421 Pprc1Q6NZN1 1644 aa23.14■■□□□ 1.29
Lsm1-201ENSMUST00000038421 Lmtk2Q3TYD6 1471 aa23.12■■□□□ 1.29
Lsm1-201ENSMUST00000038421 Fhod3Q76LL6 1578 aa23.12■■□□□ 1.29
Lsm1-201ENSMUST00000038421 Mrs2Q5NCE8 434 aa23.12■■□□□ 1.29
Lsm1-201ENSMUST00000038421 Thoc2B1AZI6 1594 aaKnown RBP23.11■■□□□ 1.29
Lsm1-201ENSMUST00000038421 Supt16hQ920B9 1047 aa23.1■■□□□ 1.29
Lsm1-201ENSMUST00000038421 Washc2Q6PGL7 1334 aa23.1■■□□□ 1.29
Lsm1-201ENSMUST00000038421 Ppp4r2Q0VGB7 417 aa23.09■■□□□ 1.29
Lsm1-201ENSMUST00000038421 Bcl11aQ9QYE3 773 aa23.06■■□□□ 1.28
Lsm1-201ENSMUST00000038421 DiexfQ8BTT6 772 aaKnown RBP23.06■■□□□ 1.28
Lsm1-201ENSMUST00000038421 Wdr43Q6ZQL4 677 aaKnown RBP23.05■■□□□ 1.28
Lsm1-201ENSMUST00000038421 Gpatch8A2A6A1 1505 aa23.05■■□□□ 1.28
Lsm1-201ENSMUST00000038421 EprsQ8CGC7 1512 aaKnown RBP23.05■■□□□ 1.28
Lsm1-201ENSMUST00000038421 Kif27Q7M6Z4 1394 aa23.04■■□□□ 1.28
Lsm1-201ENSMUST00000038421 Wwc2Q6NXJ0 1187 aa23.04■■□□□ 1.28
Lsm1-201ENSMUST00000038421 Slc4a2P13808 1237 aaKnown RBP23.04■■□□□ 1.28
Lsm1-201ENSMUST00000038421 Rtl5Q5DTT4 599 aa23.03■■□□□ 1.28
Lsm1-201ENSMUST00000038421 NexmifQ5DTT1 1515 aa23.03■■□□□ 1.28
Lsm1-201ENSMUST00000038421 Ncoa1P70365 1447 aa23.02■■□□□ 1.28
Lsm1-201ENSMUST00000038421 Usp47Q8BY87 1376 aa23.01■■□□□ 1.27
Lsm1-201ENSMUST00000038421 P3h3Q8CG70 732 aa23.01■■□□□ 1.27
Lsm1-201ENSMUST00000038421 Gcc2Q8CHG3 1679 aa23.01■■□□□ 1.27
Lsm1-201ENSMUST00000038421 Cabp1Q9JLK7 227 aa23■■□□□ 1.27
Lsm1-201ENSMUST00000038421 Zfp644E9QA22 1323 aa22.99■■□□□ 1.27
Lsm1-201ENSMUST00000038421 CadpsQ80TJ1 1355 aa22.99■■□□□ 1.27
Lsm1-201ENSMUST00000038421 BC005561E9Q5E2 1589 aa22.99■■□□□ 1.27
Lsm1-201ENSMUST00000038421 Pkd2O35245 966 aa22.98■■□□□ 1.27
Lsm1-201ENSMUST00000038421 Setbp1Q9Z180 1582 aa22.98■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 83.4 ms