RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Baz1bQ9Z277 1479 aa15.6■□□□□ 0.09
Ptcd1-201ENSMUST00000031628 Npm1Q61937 292 aaKnown RBP15.59■□□□□ 0.09
Ptcd1-201ENSMUST00000031628 Cdk11bP24788 784 aaKnown RBP15.59■□□□□ 0.09
Ptcd1-201ENSMUST00000031628 Lmod2Q3UHZ5 550 aa15.55■□□□□ 0.08
Ptcd1-201ENSMUST00000031628 Setd5Q5XJV7 1441 aa15.54■□□□□ 0.08
Ptcd1-201ENSMUST00000031628 Mapk8ip2Q9ERE9 830 aa15.54■□□□□ 0.08
Ptcd1-201ENSMUST00000031628 LrpprcQ6PB66 1392 aaKnown RBP15.53■□□□□ 0.08
Ptcd1-201ENSMUST00000031628 Ifnlr1Q8CGK5 535 aa15.52■□□□□ 0.08
Ptcd1-201ENSMUST00000031628 Map3k1P53349 1493 aa15.5■□□□□ 0.07
Ptcd1-201ENSMUST00000031628 Fam50aQ9WV03 339 aaKnown RBP15.5■□□□□ 0.07
Ptcd1-201ENSMUST00000031628 Eea1Q8BL66 1411 aa15.5■□□□□ 0.07
Ptcd1-201ENSMUST00000031628 Arap1Q4LDD4 1452 aa15.5■□□□□ 0.07
Ptcd1-201ENSMUST00000031628 Efcab5A0JP43 1406 aa15.49■□□□□ 0.07
Ptcd1-201ENSMUST00000031628 Ncapd3Q6ZQK0 1506 aa15.49■□□□□ 0.07
Ptcd1-201ENSMUST00000031628 Mroh2bQ7M6Y6 1581 aa15.49■□□□□ 0.07
Ptcd1-201ENSMUST00000031628 PogzQ8BZH4 1409 aaKnown RBP15.49■□□□□ 0.07
Ptcd1-201ENSMUST00000031628 Gm38655A0A286YDK6 273 aa15.48■□□□□ 0.07
Ptcd1-201ENSMUST00000031628 Duox2A2AQ99 1517 aa15.46■□□□□ 0.07
Ptcd1-201ENSMUST00000031628 BlmO88700 1416 aa15.43■□□□□ 0.06
Ptcd1-201ENSMUST00000031628 Dhx29Q6PGC1 1365 aaKnown RBP15.41■□□□□ 0.06
Ptcd1-201ENSMUST00000031628 Mrc2Q64449 1479 aa15.41■□□□□ 0.06
Ptcd1-201ENSMUST00000031628 AqrQ8CFQ3 1481 aaKnown RBP15.38■□□□□ 0.05
Ptcd1-201ENSMUST00000031628 Arhgef5E9Q7D5 1581 aa15.35■□□□□ 0.05
Ptcd1-201ENSMUST00000031628 Kif21aQ9QXL2 1672 aa15.34■□□□□ 0.05
Ptcd1-201ENSMUST00000031628 Samd9lQ69Z37 1561 aa15.33■□□□□ 0.05
Ptcd1-201ENSMUST00000031628 Carmil1Q6EDY6 1374 aa15.32■□□□□ 0.04
Ptcd1-201ENSMUST00000031628 Ankrd26Q811D2 1581 aa15.3■□□□□ 0.04
Ptcd1-201ENSMUST00000031628 Ube2uB1AUC4 352 aa15.3■□□□□ 0.04
Ptcd1-201ENSMUST00000031628 Crocc2F6XLV1 1638 aa15.3■□□□□ 0.04
Ptcd1-201ENSMUST00000031628 NclP09405 707 aaKnown RBP15.29■□□□□ 0.04
Ptcd1-201ENSMUST00000031628 SynmQ70IV5 1561 aa15.29■□□□□ 0.04
Ptcd1-201ENSMUST00000031628 Fam71e1A1L3C1 212 aa15.29■□□□□ 0.04
Ptcd1-201ENSMUST00000031628 Erich3F6QRE9 1637 aa15.28■□□□□ 0.04
Ptcd1-201ENSMUST00000031628 Naip1Q9QWK5 1403 aa15.27■□□□□ 0.03
Ptcd1-201ENSMUST00000031628 Rad54l2Q99NG0 1466 aa15.26■□□□□ 0.03
Ptcd1-201ENSMUST00000031628 Cux1P53564 1515 aa15.25■□□□□ 0.03
Ptcd1-201ENSMUST00000031628 Tiam1Q60610 1591 aa15.23■□□□□ 0.03
Ptcd1-201ENSMUST00000031628 Slx4Q6P1D7 1565 aa15.21■□□□□ 0.02
Ptcd1-201ENSMUST00000031628 Hspa5P20029 655 aaKnown RBP15.2■□□□□ 0.02
Ptcd1-201ENSMUST00000031628 Plb1Q3TTY0 1478 aa15.2■□□□□ 0.02
Ptcd1-201ENSMUST00000031628 Chic2Q9D9G3 165 aa15.2■□□□□ 0.02
Ptcd1-201ENSMUST00000031628 Kdm5bQ80Y84 1544 aa15.19■□□□□ 0.02
Ptcd1-201ENSMUST00000031628 Pcf11G3X9Z4 1553 aa15.19■□□□□ 0.02
Ptcd1-201ENSMUST00000031628 Dnajc5P60904 198 aa15.19■□□□□ 0.02
Ptcd1-201ENSMUST00000031628 Lmo7E9PYF4 1699 aaKnown RBP15.19■□□□□ 0.02
Ptcd1-201ENSMUST00000031628 Urb2E9Q7L1 1524 aaKnown RBP15.18■□□□□ 0.02
Ptcd1-201ENSMUST00000031628 Fyco1Q8VDC1 1437 aa15.16■□□□□ 0.02
Ptcd1-201ENSMUST00000031628 Pla2r1Q62028 1487 aa15.16■□□□□ 0.02
Ptcd1-201ENSMUST00000031628 Magi3Q9EQJ9 1476 aa15.15■□□□□ 0.02
Ptcd1-201ENSMUST00000031628 Polr1aO35134 1717 aaKnown RBP15.15■□□□□ 0.02
Ptcd1-201ENSMUST00000031628 Rpap1Q80TE0 1409 aa15.15■□□□□ 0.02
Ptcd1-201ENSMUST00000031628 Disp1Q3TDN0 1521 aa15.15■□□□□ 0.02
Ptcd1-201ENSMUST00000031628 Hnrnpul2Q00PI9 745 aaKnown RBP15.14■□□□□ 0.01
Ptcd1-201ENSMUST00000031628 CntlnA2AM05 1397 aa15.14■□□□□ 0.01
Ptcd1-201ENSMUST00000031628 Aebp1Q640N1 1128 aa15.13■□□□□ 0.01
Ptcd1-201ENSMUST00000031628 SafbD3YXK2 937 aaKnown RBP15.12■□□□□ 0.01
Ptcd1-201ENSMUST00000031628 Slc24a1Q91WD8 1130 aa15.12■□□□□ 0.01
Ptcd1-201ENSMUST00000031628 EprsQ8CGC7 1512 aaKnown RBP15.12■□□□□ 0.01
Ptcd1-201ENSMUST00000031628 Pknox2Q8BG99 474 aa15.12■□□□□ 0.01
Ptcd1-201ENSMUST00000031628 Grin2aP35436 1464 aa15.11■□□□□ 0.01
Ptcd1-201ENSMUST00000031628 3425401B19RikD3Z1D3 1412 aa15.11■□□□□ 0.01
Ptcd1-201ENSMUST00000031628 Hdac5Q9Z2V6 1113 aa15.09■□□□□ 0.01
Ptcd1-201ENSMUST00000031628 Fgd1P52734 960 aa15.08■□□□□ 0.01
Ptcd1-201ENSMUST00000031628 Sin3aQ60520 1274 aaKnown RBP15.08■□□□□ 0
Ptcd1-201ENSMUST00000031628 CadpsQ80TJ1 1355 aa15.07■□□□□ 0
Ptcd1-201ENSMUST00000031628 Setd1bQ8CFT2 1985 aa15.07■□□□□ 0
Ptcd1-201ENSMUST00000031628 Ift140E9PY46 1464 aa15.05■□□□□ -0
Ptcd1-201ENSMUST00000031628 Peg3Q3URU2 1571 aa15.04■□□□□ -0
Ptcd1-201ENSMUST00000031628 Gm7298A0A0N4SVU1 1476 aa15.03■□□□□ -0
Ptcd1-201ENSMUST00000031628 Lrriq1Q0P5X1 1673 aa15.02■□□□□ -0
Ptcd1-201ENSMUST00000031628 Nup160Q9Z0W3 1402 aaKnown RBP15.02□□□□□ -0.01
Ptcd1-201ENSMUST00000031628 Adamts12Q811B3 1600 aa15.01□□□□□ -0.01
Ptcd1-201ENSMUST00000031628 Abca5Q8K448 1642 aa15.01□□□□□ -0.01
Ptcd1-201ENSMUST00000031628 Gm1043A0A140LJC2 1431 aa15.01□□□□□ -0.01
Ptcd1-201ENSMUST00000031628 WizO88286 1684 aaKnown RBP15□□□□□ -0.01
Ptcd1-201ENSMUST00000031628 Gpatch8A2A6A1 1505 aa15□□□□□ -0.01
Ptcd1-201ENSMUST00000031628 TchhA0A0B4J1F9 1599 aa14.99□□□□□ -0.01
Ptcd1-201ENSMUST00000031628 NrdcQ8BHG1 1161 aa14.99□□□□□ -0.01
Ptcd1-201ENSMUST00000031628 Pbrm1Q8BSQ9 1634 aaKnown RBP14.97□□□□□ -0.01
Ptcd1-201ENSMUST00000031628 Soga1E1U8D0 1418 aa14.96□□□□□ -0.01
Ptcd1-201ENSMUST00000031628 PxdnQ3UQ28 1475 aa14.96□□□□□ -0.01
Ptcd1-201ENSMUST00000031628 Ccnb3Q810T2 1396 aa14.95□□□□□ -0.02
Ptcd1-201ENSMUST00000031628 Mia2Q91ZV0 1396 aa14.93□□□□□ -0.02
Ptcd1-201ENSMUST00000031628 Abca16E9PWJ7 1678 aa14.92□□□□□ -0.02
Ptcd1-201ENSMUST00000031628 Cc2d2bA0A286YDU8 1405 aa14.92□□□□□ -0.02
Ptcd1-201ENSMUST00000031628 Fhad1A6PWD2 1420 aa14.92□□□□□ -0.02
Ptcd1-201ENSMUST00000031628 A2mQ6GQT1 1474 aa14.91□□□□□ -0.02
Ptcd1-201ENSMUST00000031628 Kif27Q7M6Z4 1394 aa14.91□□□□□ -0.02
Ptcd1-201ENSMUST00000031628 Ccer2J3QPU5 274 aa14.9□□□□□ -0.02
Ptcd1-201ENSMUST00000031628 Naip2Q9QUK4 1447 aa14.9□□□□□ -0.02
Ptcd1-201ENSMUST00000031628 Gm13697A2AK42 830 aa14.89□□□□□ -0.03
Ptcd1-201ENSMUST00000031628 Zfp644E9QA22 1323 aa14.88□□□□□ -0.03
Ptcd1-201ENSMUST00000031628 Tnnt3Q9QZ47 272 aa14.87□□□□□ -0.03
Ptcd1-201ENSMUST00000031628 Vps8Q0P5W1 1427 aa14.87□□□□□ -0.03
Ptcd1-201ENSMUST00000031628 WrnO09053 1401 aa14.87□□□□□ -0.03
Ptcd1-201ENSMUST00000031628 Arhgap27A2AB59 869 aa14.86□□□□□ -0.03
Ptcd1-201ENSMUST00000031628 Cabp1Q9JLK7 227 aa14.86□□□□□ -0.03
Ptcd1-201ENSMUST00000031628 Znf710Q3U288 666 aa14.86□□□□□ -0.03
Ptcd1-201ENSMUST00000031628 Abcc2Q8VI47 1543 aa14.85□□□□□ -0.03
Ptcd1-201ENSMUST00000031628 Lmtk2Q3TYD6 1471 aa14.85□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms