RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 Top2aQ01320 1528 aaKnown RBP20.49■□□□□ 0.87
Rtf1-201ENSMUST00000028767 Os9Q8K2C7 672 aa20.46■□□□□ 0.87
Rtf1-201ENSMUST00000028767 Hspa5P20029 655 aaKnown RBP20.46■□□□□ 0.87
Rtf1-201ENSMUST00000028767 Top2bQ64511 1612 aa20.43■□□□□ 0.86
Rtf1-201ENSMUST00000028767 Aebp1Q640N1 1128 aa20.42■□□□□ 0.86
Rtf1-201ENSMUST00000028767 Anp32bQ9EST5 272 aaKnown RBP20.42■□□□□ 0.86
Rtf1-201ENSMUST00000028767 1700123L14RikQ3V2K7 440 aa20.41■□□□□ 0.86
Rtf1-201ENSMUST00000028767 Phldb1Q6PDH0 1371 aaKnown RBP20.36■□□□□ 0.85
Rtf1-201ENSMUST00000028767 Arhgap27A2AB59 869 aa20.36■□□□□ 0.85
Rtf1-201ENSMUST00000028767 Aplp2Q06335 707 aa20.34■□□□□ 0.85
Rtf1-201ENSMUST00000028767 Erich6D3Z6S9 713 aa20.31■□□□□ 0.84
Rtf1-201ENSMUST00000028767 Mrs2Q5NCE8 434 aa20.3■□□□□ 0.84
Rtf1-201ENSMUST00000028767 PtprkP35822 1457 aa20.29■□□□□ 0.84
Rtf1-201ENSMUST00000028767 Arhgap35Q91YM2 1499 aa20.29■□□□□ 0.84
Rtf1-201ENSMUST00000028767 Rgl3Q3UYI5 709 aa20.27■□□□□ 0.84
Rtf1-201ENSMUST00000028767 LrpprcQ6PB66 1392 aaKnown RBP20.27■□□□□ 0.83
Rtf1-201ENSMUST00000028767 Mia2Q91ZV0 1396 aa20.27■□□□□ 0.83
Rtf1-201ENSMUST00000028767 Carmil1Q6EDY6 1374 aa20.26■□□□□ 0.83
Rtf1-201ENSMUST00000028767 CntlnA2AM05 1397 aa20.26■□□□□ 0.83
Rtf1-201ENSMUST00000028767 Kif27Q7M6Z4 1394 aa20.24■□□□□ 0.83
Rtf1-201ENSMUST00000028767 Frmpd1A2AKB4 1549 aa20.23■□□□□ 0.83
Rtf1-201ENSMUST00000028767 Fyco1Q8VDC1 1437 aa20.23■□□□□ 0.83
Rtf1-201ENSMUST00000028767 Sin3aQ60520 1274 aaKnown RBP20.22■□□□□ 0.83
Rtf1-201ENSMUST00000028767 Shroom4Q1W617 1475 aa20.22■□□□□ 0.83
Rtf1-201ENSMUST00000028767 Rpap1Q80TE0 1409 aa20.19■□□□□ 0.82
Rtf1-201ENSMUST00000028767 Arap1Q4LDD4 1452 aa20.18■□□□□ 0.82
Rtf1-201ENSMUST00000028767 Anp32aO35381 247 aa20.18■□□□□ 0.82
Rtf1-201ENSMUST00000028767 Calr4Q3TQS0 420 aa20.18■□□□□ 0.82
Rtf1-201ENSMUST00000028767 NeflP08551 543 aa20.17■□□□□ 0.82
Rtf1-201ENSMUST00000028767 Prdm10Q3UTQ7 1184 aa20.17■□□□□ 0.82
Rtf1-201ENSMUST00000028767 Dhx29Q6PGC1 1365 aaKnown RBP20.15■□□□□ 0.82
Rtf1-201ENSMUST00000028767 Cabp1Q9JLK7 227 aa20.14■□□□□ 0.82
Rtf1-201ENSMUST00000028767 Grwd1Q810D6 446 aaKnown RBP20.14■□□□□ 0.81
Rtf1-201ENSMUST00000028767 Gm13697A2AK42 830 aa20.13■□□□□ 0.81
Rtf1-201ENSMUST00000028767 SafbD3YXK2 937 aaKnown RBP20.13■□□□□ 0.81
Rtf1-201ENSMUST00000028767 Mtus2Q3UHD3 1353 aa20.11■□□□□ 0.81
Rtf1-201ENSMUST00000028767 Ncapd3Q6ZQK0 1506 aa20.08■□□□□ 0.81
Rtf1-201ENSMUST00000028767 Pkd2O35245 966 aa20.07■□□□□ 0.8
Rtf1-201ENSMUST00000028767 P3h3Q8CG70 732 aa20.07■□□□□ 0.8
Rtf1-201ENSMUST00000028767 Ccnb3Q810T2 1396 aa20.07■□□□□ 0.8
Rtf1-201ENSMUST00000028767 NrkQ9R0G8 1455 aa20.07■□□□□ 0.8
Rtf1-201ENSMUST00000028767 Naip1Q9QWK5 1403 aa20.06■□□□□ 0.8
Rtf1-201ENSMUST00000028767 Ttbk1Q6PCN3 1308 aa20.06■□□□□ 0.8
Rtf1-201ENSMUST00000028767 Mphosph9A6H5Y1 991 aa20.05■□□□□ 0.8
Rtf1-201ENSMUST00000028767 Grin2bQ01097 1482 aa20.03■□□□□ 0.8
Rtf1-201ENSMUST00000028767 Ppp4r2Q0VGB7 417 aa20.03■□□□□ 0.8
Rtf1-201ENSMUST00000028767 Myt1Q8CFC2 1127 aa20.02■□□□□ 0.8
Rtf1-201ENSMUST00000028767 Efcab5A0JP43 1406 aa20.01■□□□□ 0.79
Rtf1-201ENSMUST00000028767 Rad54l2Q99NG0 1466 aa20.01■□□□□ 0.79
Rtf1-201ENSMUST00000028767 Wdr62Q3U3T8 1523 aa20■□□□□ 0.79
Rtf1-201ENSMUST00000028767 Wwc2Q6NXJ0 1187 aa19.99■□□□□ 0.79
Rtf1-201ENSMUST00000028767 Arhgef5E9Q7D5 1581 aa19.99■□□□□ 0.79
Rtf1-201ENSMUST00000028767 Mroh2bQ7M6Y6 1581 aa19.98■□□□□ 0.79
Rtf1-201ENSMUST00000028767 Rad21Q61550 635 aaKnown RBP19.98■□□□□ 0.79
Rtf1-201ENSMUST00000028767 Rrp7aQ9D1C9 280 aaKnown RBP19.98■□□□□ 0.79
Rtf1-201ENSMUST00000028767 Duox2A2AQ99 1517 aa19.97■□□□□ 0.79
Rtf1-201ENSMUST00000028767 Clstn2Q9ER65 966 aa19.96■□□□□ 0.79
Rtf1-201ENSMUST00000028767 Card11Q8CIS0 1159 aa19.96■□□□□ 0.79
Rtf1-201ENSMUST00000028767 Map3k1P53349 1493 aa19.94■□□□□ 0.78
Rtf1-201ENSMUST00000028767 Camsap1A2AHC3 1581 aa19.94■□□□□ 0.78
Rtf1-201ENSMUST00000028767 Trak1Q6PD31 939 aa19.92■□□□□ 0.78
Rtf1-201ENSMUST00000028767 Fam71e1A1L3C1 212 aa19.9■□□□□ 0.78
Rtf1-201ENSMUST00000028767 Nlrp6Q91WS2 869 aa19.9■□□□□ 0.78
Rtf1-201ENSMUST00000028767 Wdr43Q6ZQL4 677 aaKnown RBP19.88■□□□□ 0.77
Rtf1-201ENSMUST00000028767 Atp1b4Q99ME6 356 aa19.88■□□□□ 0.77
Rtf1-201ENSMUST00000028767 PogzQ8BZH4 1409 aaKnown RBP19.87■□□□□ 0.77
Rtf1-201ENSMUST00000028767 Lamc3Q9R0B6 1581 aa19.87■□□□□ 0.77
Rtf1-201ENSMUST00000028767 WrnO09053 1401 aa19.86■□□□□ 0.77
Rtf1-201ENSMUST00000028767 Map4P27546 1125 aaKnown RBP19.86■□□□□ 0.77
Rtf1-201ENSMUST00000028767 Tiam1Q60610 1591 aa19.86■□□□□ 0.77
Rtf1-201ENSMUST00000028767 Kdm2aP59997 1161 aa19.85■□□□□ 0.77
Rtf1-201ENSMUST00000028767 Ofd1Q80Z25 1017 aa19.85■□□□□ 0.77
Rtf1-201ENSMUST00000028767 Rundc1Q0VDN7 615 aa19.84■□□□□ 0.77
Rtf1-201ENSMUST00000028767 AqrQ8CFQ3 1481 aaKnown RBP19.84■□□□□ 0.77
Rtf1-201ENSMUST00000028767 AknaQ80VW7 1404 aa19.82■□□□□ 0.76
Rtf1-201ENSMUST00000028767 Cwc22Q8C5N3 908 aaKnown RBP19.82■□□□□ 0.76
Rtf1-201ENSMUST00000028767 Exoc6Q8R313 802 aa19.82■□□□□ 0.76
Rtf1-201ENSMUST00000028767 Fhad1A6PWD2 1420 aa19.81■□□□□ 0.76
Rtf1-201ENSMUST00000028767 Mroh3A0A1D5RM54 893 aa19.79■□□□□ 0.76
Rtf1-201ENSMUST00000028767 Plekhh2Q8C115 1491 aa19.79■□□□□ 0.76
Rtf1-201ENSMUST00000028767 Zfp644E9QA22 1323 aa19.79■□□□□ 0.76
Rtf1-201ENSMUST00000028767 UacaQ8CGB3 1411 aa19.78■□□□□ 0.76
Rtf1-201ENSMUST00000028767 Usp47Q8BY87 1376 aa19.77■□□□□ 0.75
Rtf1-201ENSMUST00000028767 Hdac5Q9Z2V6 1113 aa19.76■□□□□ 0.75
Rtf1-201ENSMUST00000028767 Polr3glQ8R0C0 218 aa19.76■□□□□ 0.75
Rtf1-201ENSMUST00000028767 Rtl5Q5DTT4 599 aa19.73■□□□□ 0.75
Rtf1-201ENSMUST00000028767 Pcf11G3X9Z4 1553 aa19.73■□□□□ 0.75
Rtf1-201ENSMUST00000028767 Vps8Q0P5W1 1427 aa19.71■□□□□ 0.75
Rtf1-201ENSMUST00000028767 Cux1P53564 1515 aa19.71■□□□□ 0.75
Rtf1-201ENSMUST00000028767 Ankrd36D3Z4K0 1415 aa19.69■□□□□ 0.74
Rtf1-201ENSMUST00000028767 4933416C03RikQ3V063 378 aa19.67■□□□□ 0.74
Rtf1-201ENSMUST00000028767 Nup155Q99P88 1391 aaKnown RBP19.67■□□□□ 0.74
Rtf1-201ENSMUST00000028767 Polr1aO35134 1717 aaKnown RBP19.67■□□□□ 0.74
Rtf1-201ENSMUST00000028767 Smg6P61406 1418 aaKnown RBP19.67■□□□□ 0.74
Rtf1-201ENSMUST00000028767 Urb2E9Q7L1 1524 aaKnown RBP19.66■□□□□ 0.74
Rtf1-201ENSMUST00000028767 Gm7298A0A0N4SVU1 1476 aa19.65■□□□□ 0.74
Rtf1-201ENSMUST00000028767 Ifit1bl1D3Z6F0 470 aa19.65■□□□□ 0.74
Rtf1-201ENSMUST00000028767 Tdrd9Q14BI7 1383 aa19.65■□□□□ 0.74
Rtf1-201ENSMUST00000028767 Stk24Q99KH8 431 aa19.64■□□□□ 0.74
Rtf1-201ENSMUST00000028767 TnnQ80Z71 1560 aa19.64■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms