RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Baz1bQ9Z277 1479 aa26.85■■□□□ 1.89
Ccdc3-201ENSMUST00000027988 Erich3F6QRE9 1637 aa26.81■■□□□ 1.88
Ccdc3-201ENSMUST00000027988 Slx4Q6P1D7 1565 aa26.8■■□□□ 1.88
Ccdc3-201ENSMUST00000027988 Pcf11G3X9Z4 1553 aa26.79■■□□□ 1.88
Ccdc3-201ENSMUST00000027988 BlmO88700 1416 aa26.79■■□□□ 1.88
Ccdc3-201ENSMUST00000027988 TchhA0A0B4J1F9 1599 aa26.75■■□□□ 1.87
Ccdc3-201ENSMUST00000027988 Lmod2Q3UHZ5 550 aa26.68■■□□□ 1.86
Ccdc3-201ENSMUST00000027988 Cux1P53564 1515 aa26.67■■□□□ 1.86
Ccdc3-201ENSMUST00000027988 Lmo7E9PYF4 1699 aaKnown RBP26.65■■□□□ 1.86
Ccdc3-201ENSMUST00000027988 Cux2P70298 1426 aa26.64■■□□□ 1.85
Ccdc3-201ENSMUST00000027988 Thoc2B1AZI6 1594 aaKnown RBP26.63■■□□□ 1.85
Ccdc3-201ENSMUST00000027988 Fam50aQ9WV03 339 aaKnown RBP26.62■■□□□ 1.85
Ccdc3-201ENSMUST00000027988 Gm38655A0A286YDK6 273 aa26.61■■□□□ 1.85
Ccdc3-201ENSMUST00000027988 3425401B19RikD3Z1D3 1412 aa26.6■■□□□ 1.85
Ccdc3-201ENSMUST00000027988 Mapk8ip2Q9ERE9 830 aa26.59■■□□□ 1.85
Ccdc3-201ENSMUST00000027988 Phldb1Q6PDH0 1371 aaKnown RBP26.52■■□□□ 1.84
Ccdc3-201ENSMUST00000027988 Carmil1Q6EDY6 1374 aa26.51■■□□□ 1.83
Ccdc3-201ENSMUST00000027988 Efcab5A0JP43 1406 aa26.48■■□□□ 1.83
Ccdc3-201ENSMUST00000027988 Npm1Q61937 292 aaKnown RBP26.48■■□□□ 1.83
Ccdc3-201ENSMUST00000027988 Aplp2Q06335 707 aa26.48■■□□□ 1.83
Ccdc3-201ENSMUST00000027988 Ubl4bQ9CQ84 188 aa26.48■■□□□ 1.83
Ccdc3-201ENSMUST00000027988 CntlnA2AM05 1397 aa26.47■■□□□ 1.83
Ccdc3-201ENSMUST00000027988 Duox2A2AQ99 1517 aa26.46■■□□□ 1.83
Ccdc3-201ENSMUST00000027988 Urb2E9Q7L1 1524 aaKnown RBP26.46■■□□□ 1.83
Ccdc3-201ENSMUST00000027988 LrpprcQ6PB66 1392 aaKnown RBP26.46■■□□□ 1.83
Ccdc3-201ENSMUST00000027988 PogzQ8BZH4 1409 aaKnown RBP26.44■■□□□ 1.82
Ccdc3-201ENSMUST00000027988 Rpap1Q80TE0 1409 aa26.42■■□□□ 1.82
Ccdc3-201ENSMUST00000027988 Hspa5P20029 655 aaKnown RBP26.39■■□□□ 1.81
Ccdc3-201ENSMUST00000027988 Samd9lQ69Z37 1561 aa26.38■■□□□ 1.81
Ccdc3-201ENSMUST00000027988 Gm1043A0A140LJC2 1431 aa26.36■■□□□ 1.81
Ccdc3-201ENSMUST00000027988 Peg3Q3URU2 1571 aa26.35■■□□□ 1.81
Ccdc3-201ENSMUST00000027988 Fyco1Q8VDC1 1437 aa26.35■■□□□ 1.81
Ccdc3-201ENSMUST00000027988 NclP09405 707 aaKnown RBP26.34■■□□□ 1.81
Ccdc3-201ENSMUST00000027988 Hnrnpul2Q00PI9 745 aaKnown RBP26.34■■□□□ 1.81
Ccdc3-201ENSMUST00000027988 Aebp1Q640N1 1128 aa26.34■■□□□ 1.81
Ccdc3-201ENSMUST00000027988 Dhx29Q6PGC1 1365 aaKnown RBP26.33■■□□□ 1.81
Ccdc3-201ENSMUST00000027988 SynmQ70IV5 1561 aa26.32■■□□□ 1.8
Ccdc3-201ENSMUST00000027988 Gm7298A0A0N4SVU1 1476 aa26.31■■□□□ 1.8
Ccdc3-201ENSMUST00000027988 Rad54l2Q99NG0 1466 aa26.31■■□□□ 1.8
Ccdc3-201ENSMUST00000027988 Fhad1A6PWD2 1420 aa26.31■■□□□ 1.8
Ccdc3-201ENSMUST00000027988 Fam135aQ6NS59 1506 aa26.3■■□□□ 1.8
Ccdc3-201ENSMUST00000027988 Naip2Q9QUK4 1447 aa26.26■■□□□ 1.79
Ccdc3-201ENSMUST00000027988 UacaQ8CGB3 1411 aa26.25■■□□□ 1.79
Ccdc3-201ENSMUST00000027988 Vps8Q0P5W1 1427 aa26.23■■□□□ 1.79
Ccdc3-201ENSMUST00000027988 A2mQ6GQT1 1474 aa26.22■■□□□ 1.79
Ccdc3-201ENSMUST00000027988 SafbD3YXK2 937 aaKnown RBP26.22■■□□□ 1.79
Ccdc3-201ENSMUST00000027988 Mia2Q91ZV0 1396 aa26.21■■□□□ 1.79
Ccdc3-201ENSMUST00000027988 Ankrd36D3Z4K0 1415 aa26.2■■□□□ 1.79
Ccdc3-201ENSMUST00000027988 Dennd4bQ3U1Y4 1499 aa26.18■■□□□ 1.78
Ccdc3-201ENSMUST00000027988 Crocc2F6XLV1 1638 aa26.16■■□□□ 1.78
Ccdc3-201ENSMUST00000027988 Chic2Q9D9G3 165 aa26.15■■□□□ 1.78
Ccdc3-201ENSMUST00000027988 CenpbP27790 599 aa26.13■■□□□ 1.77
Ccdc3-201ENSMUST00000027988 Polr1aO35134 1717 aaKnown RBP26.11■■□□□ 1.77
Ccdc3-201ENSMUST00000027988 Ccnb3Q810T2 1396 aa26.1■■□□□ 1.77
Ccdc3-201ENSMUST00000027988 Sin3aQ60520 1274 aaKnown RBP26.09■■□□□ 1.77
Ccdc3-201ENSMUST00000027988 Gm13697A2AK42 830 aa26.08■■□□□ 1.77
Ccdc3-201ENSMUST00000027988 Ccer2J3QPU5 274 aa26.08■■□□□ 1.77
Ccdc3-201ENSMUST00000027988 Znf710Q3U288 666 aa26.08■■□□□ 1.76
Ccdc3-201ENSMUST00000027988 EprsQ8CGC7 1512 aaKnown RBP26.06■■□□□ 1.76
Ccdc3-201ENSMUST00000027988 Pla2r1Q62028 1487 aa26.06■■□□□ 1.76
Ccdc3-201ENSMUST00000027988 Gpatch8A2A6A1 1505 aa26.04■■□□□ 1.76
Ccdc3-201ENSMUST00000027988 Ube2uB1AUC4 352 aa26.02■■□□□ 1.76
Ccdc3-201ENSMUST00000027988 Naip5Q9R016 1403 aa26.02■■□□□ 1.76
Ccdc3-201ENSMUST00000027988 Lmtk2Q3TYD6 1471 aa26.01■■□□□ 1.75
Ccdc3-201ENSMUST00000027988 CadpsQ80TJ1 1355 aa25.99■■□□□ 1.75
Ccdc3-201ENSMUST00000027988 Kif21aQ9QXL2 1672 aa25.98■■□□□ 1.75
Ccdc3-201ENSMUST00000027988 Tnnt3Q9QZ47 272 aa25.97■■□□□ 1.75
Ccdc3-201ENSMUST00000027988 Cul7Q8VE73 1689 aa25.96■■□□□ 1.75
Ccdc3-201ENSMUST00000027988 Abca5Q8K448 1642 aa25.96■■□□□ 1.75
Ccdc3-201ENSMUST00000027988 Magi3Q9EQJ9 1476 aa25.96■■□□□ 1.75
Ccdc3-201ENSMUST00000027988 Ncoa2Q61026 1462 aa25.93■■□□□ 1.74
Ccdc3-201ENSMUST00000027988 BC005561E9Q5E2 1589 aa25.93■■□□□ 1.74
Ccdc3-201ENSMUST00000027988 NexmifQ5DTT1 1515 aa25.92■■□□□ 1.74
Ccdc3-201ENSMUST00000027988 Kif27Q7M6Z4 1394 aa25.91■■□□□ 1.74
Ccdc3-201ENSMUST00000027988 Camsap2Q8C1B1 1461 aa25.89■■□□□ 1.74
Ccdc3-201ENSMUST00000027988 WizO88286 1684 aaKnown RBP25.86■■□□□ 1.73
Ccdc3-201ENSMUST00000027988 Grin2aP35436 1464 aa25.84■■□□□ 1.73
Ccdc3-201ENSMUST00000027988 Fhod3Q76LL6 1578 aa25.84■■□□□ 1.73
Ccdc3-201ENSMUST00000027988 Gcc2Q8CHG3 1679 aa25.84■■□□□ 1.73
Ccdc3-201ENSMUST00000027988 Mphosph9A6H5Y1 991 aa25.82■■□□□ 1.72
Ccdc3-201ENSMUST00000027988 Zfp644E9QA22 1323 aa25.82■■□□□ 1.72
Ccdc3-201ENSMUST00000027988 Smg6P61406 1418 aaKnown RBP25.81■■□□□ 1.72
Ccdc3-201ENSMUST00000027988 Cabp1Q9JLK7 227 aa25.79■■□□□ 1.72
Ccdc3-201ENSMUST00000027988 PxdnQ3UQ28 1475 aa25.78■■□□□ 1.72
Ccdc3-201ENSMUST00000027988 Dnajc5bQ9CQ94 199 aa25.78■■□□□ 1.72
Ccdc3-201ENSMUST00000027988 Fam71e1A1L3C1 212 aa25.78■■□□□ 1.72
Ccdc3-201ENSMUST00000027988 Plb1Q3TTY0 1478 aa25.78■■□□□ 1.72
Ccdc3-201ENSMUST00000027988 Adamts12Q811B3 1600 aa25.76■■□□□ 1.71
Ccdc3-201ENSMUST00000027988 Slc24a1Q91WD8 1130 aa25.76■■□□□ 1.71
Ccdc3-201ENSMUST00000027988 Setbp1Q9Z180 1582 aa25.74■■□□□ 1.71
Ccdc3-201ENSMUST00000027988 Stra8P70278 393 aa25.74■■□□□ 1.71
Ccdc3-201ENSMUST00000027988 Disp1Q3TDN0 1521 aa25.74■■□□□ 1.71
Ccdc3-201ENSMUST00000027988 Pprc1Q6NZN1 1644 aa25.73■■□□□ 1.71
Ccdc3-201ENSMUST00000027988 Mug1P28665 1476 aa25.73■■□□□ 1.71
Ccdc3-201ENSMUST00000027988 Mrc2Q64449 1479 aa25.72■■□□□ 1.71
Ccdc3-201ENSMUST00000027988 Setd1bQ8CFT2 1985 aa25.71■■□□□ 1.71
Ccdc3-201ENSMUST00000027988 Soga1E1U8D0 1418 aa25.7■■□□□ 1.71
Ccdc3-201ENSMUST00000027988 Ncoa3O09000 1398 aa25.7■■□□□ 1.7
Ccdc3-201ENSMUST00000027988 Arhgef40Q3UPH7 1517 aa25.7■■□□□ 1.7
Ccdc3-201ENSMUST00000027988 Abcc5Q9R1X5 1436 aa25.69■■□□□ 1.7
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms