RNA–Protein interactions for RNA: ENSMUST00000023359.12

Nde1-201, Transcript of Nuclear distribution protein nudE homolog 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nde1, Length 2,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1-201ENSMUST00000023359 Rad54l2Q99NG0 1466 aa22.53■■□□□ 1.2
Nde1-201ENSMUST00000023359 Cux1P53564 1515 aa22.53■■□□□ 1.2
Nde1-201ENSMUST00000023359 Pcf11G3X9Z4 1553 aa22.51■■□□□ 1.19
Nde1-201ENSMUST00000023359 Tiam1Q60610 1591 aa22.51■■□□□ 1.19
Nde1-201ENSMUST00000023359 Pcgf6Q99NA9 353 aa22.48■■□□□ 1.19
Nde1-201ENSMUST00000023359 Ncapd3Q6ZQK0 1506 aa22.45■■□□□ 1.19
Nde1-201ENSMUST00000023359 Lmo7E9PYF4 1699 aaKnown RBP22.44■■□□□ 1.18
Nde1-201ENSMUST00000023359 Naip1Q9QWK5 1403 aa22.44■■□□□ 1.18
Nde1-201ENSMUST00000023359 BlmO88700 1416 aa22.41■■□□□ 1.18
Nde1-201ENSMUST00000023359 Slx4Q6P1D7 1565 aa22.41■■□□□ 1.18
Nde1-201ENSMUST00000023359 Urb2E9Q7L1 1524 aaKnown RBP22.4■■□□□ 1.18
Nde1-201ENSMUST00000023359 Plb1Q3TTY0 1478 aa22.39■■□□□ 1.17
Nde1-201ENSMUST00000023359 Fyco1Q8VDC1 1437 aa22.38■■□□□ 1.17
Nde1-201ENSMUST00000023359 Polr1aO35134 1717 aaKnown RBP22.38■■□□□ 1.17
Nde1-201ENSMUST00000023359 Supt5hO55201 1082 aaKnown RBP22.37■■□□□ 1.17
Nde1-201ENSMUST00000023359 Pla2r1Q62028 1487 aa22.34■■□□□ 1.17
Nde1-201ENSMUST00000023359 Lmod2Q3UHZ5 550 aa22.33■■□□□ 1.17
Nde1-201ENSMUST00000023359 CntlnA2AM05 1397 aa22.32■■□□□ 1.16
Nde1-201ENSMUST00000023359 Magi3Q9EQJ9 1476 aa22.32■■□□□ 1.16
Nde1-201ENSMUST00000023359 EprsQ8CGC7 1512 aaKnown RBP22.3■■□□□ 1.16
Nde1-201ENSMUST00000023359 Grin2aP35436 1464 aa22.28■■□□□ 1.16
Nde1-201ENSMUST00000023359 Aebp1Q640N1 1128 aa22.28■■□□□ 1.16
Nde1-201ENSMUST00000023359 Rpap1Q80TE0 1409 aa22.26■■□□□ 1.15
Nde1-201ENSMUST00000023359 Disp1Q3TDN0 1521 aa22.26■■□□□ 1.15
Nde1-201ENSMUST00000023359 Peg3Q3URU2 1571 aa22.22■■□□□ 1.15
Nde1-201ENSMUST00000023359 Setd1bQ8CFT2 1985 aa22.2■■□□□ 1.14
Nde1-201ENSMUST00000023359 CadpsQ80TJ1 1355 aa22.19■■□□□ 1.14
Nde1-201ENSMUST00000023359 WizO88286 1684 aaKnown RBP22.18■■□□□ 1.14
Nde1-201ENSMUST00000023359 Las1lA2BE28 776 aaKnown RBP22.18■■□□□ 1.14
Nde1-201ENSMUST00000023359 Abca5Q8K448 1642 aa22.17■■□□□ 1.14
Nde1-201ENSMUST00000023359 Gm7298A0A0N4SVU1 1476 aa22.17■■□□□ 1.14
Nde1-201ENSMUST00000023359 Lrriq1Q0P5X1 1673 aa22.15■■□□□ 1.14
Nde1-201ENSMUST00000023359 Ift140E9PY46 1464 aa22.14■■□□□ 1.14
Nde1-201ENSMUST00000023359 Gm1043A0A140LJC2 1431 aa22.13■■□□□ 1.13
Nde1-201ENSMUST00000023359 Adamts12Q811B3 1600 aa22.13■■□□□ 1.13
Nde1-201ENSMUST00000023359 Mapk8ip2Q9ERE9 830 aa22.13■■□□□ 1.13
Nde1-201ENSMUST00000023359 TchhA0A0B4J1F9 1599 aa22.12■■□□□ 1.13
Nde1-201ENSMUST00000023359 Kdm5bQ80Y84 1544 aa22.12■■□□□ 1.13
Nde1-201ENSMUST00000023359 Gpatch8A2A6A1 1505 aa22.11■■□□□ 1.13
Nde1-201ENSMUST00000023359 TonslQ6NZL6 1363 aa22.1■■□□□ 1.13
Nde1-201ENSMUST00000023359 Fam50aQ9WV03 339 aaKnown RBP22.1■■□□□ 1.13
Nde1-201ENSMUST00000023359 Pbrm1Q8BSQ9 1634 aaKnown RBP22.08■■□□□ 1.13
Nde1-201ENSMUST00000023359 3425401B19RikD3Z1D3 1412 aa22.07■■□□□ 1.12
Nde1-201ENSMUST00000023359 Nup160Q9Z0W3 1402 aaKnown RBP22.07■■□□□ 1.12
Nde1-201ENSMUST00000023359 PxdnQ3UQ28 1475 aa22.07■■□□□ 1.12
Nde1-201ENSMUST00000023359 Abca16E9PWJ7 1678 aa22.05■■□□□ 1.12
Nde1-201ENSMUST00000023359 Kif27Q7M6Z4 1394 aa22.03■■□□□ 1.12
Nde1-201ENSMUST00000023359 Soga1E1U8D0 1418 aa22.02■■□□□ 1.12
Nde1-201ENSMUST00000023359 Eid3Q3V124 375 aa22.01■■□□□ 1.11
Nde1-201ENSMUST00000023359 Sall2Q9QX96 1004 aa22.01■■□□□ 1.11
Nde1-201ENSMUST00000023359 Wdr66E9Q743 1299 aa21.99■■□□□ 1.11
Nde1-201ENSMUST00000023359 Aebp2Q9Z248 504 aaKnown RBP21.99■■□□□ 1.11
Nde1-201ENSMUST00000023359 Arhgap27A2AB59 869 aa21.95■■□□□ 1.1
Nde1-201ENSMUST00000023359 WrnO09053 1401 aa21.94■■□□□ 1.1
Nde1-201ENSMUST00000023359 Ccnb3Q810T2 1396 aa21.94■■□□□ 1.1
Nde1-201ENSMUST00000023359 Cc2d2bA0A286YDU8 1405 aa21.93■■□□□ 1.1
Nde1-201ENSMUST00000023359 BC005561E9Q5E2 1589 aa21.9■■□□□ 1.1
Nde1-201ENSMUST00000023359 Lmtk2Q3TYD6 1471 aa21.89■■□□□ 1.1
Nde1-201ENSMUST00000023359 NexmifQ5DTT1 1515 aa21.89■■□□□ 1.09
Nde1-201ENSMUST00000023359 Abcc2Q8VI47 1543 aa21.88■■□□□ 1.09
Nde1-201ENSMUST00000023359 A2mQ6GQT1 1474 aa21.87■■□□□ 1.09
Nde1-201ENSMUST00000023359 Mia2Q91ZV0 1396 aa21.86■■□□□ 1.09
Nde1-201ENSMUST00000023359 Naip2Q9QUK4 1447 aa21.85■■□□□ 1.09
Nde1-201ENSMUST00000023359 Fhad1A6PWD2 1420 aa21.85■■□□□ 1.09
Nde1-201ENSMUST00000023359 Gcc2Q8CHG3 1679 aa21.83■■□□□ 1.09
Nde1-201ENSMUST00000023359 Rusc2Q80U22 1514 aa21.82■■□□□ 1.08
Nde1-201ENSMUST00000023359 Shroom2A2ALU4 1481 aa21.82■■□□□ 1.08
Nde1-201ENSMUST00000023359 Rapgef6Q5NCJ1 1609 aa21.81■■□□□ 1.08
Nde1-201ENSMUST00000023359 Vps8Q0P5W1 1427 aa21.8■■□□□ 1.08
Nde1-201ENSMUST00000023359 Chic2Q9D9G3 165 aa21.8■■□□□ 1.08
Nde1-201ENSMUST00000023359 Ppargc1bQ8VHJ7 1014 aa21.77■■□□□ 1.08
Nde1-201ENSMUST00000023359 ClspnQ80YR7 1315 aa21.77■■□□□ 1.08
Nde1-201ENSMUST00000023359 Mug1P28665 1476 aa21.77■■□□□ 1.08
Nde1-201ENSMUST00000023359 Ncoa3O09000 1398 aa21.76■■□□□ 1.07
Nde1-201ENSMUST00000023359 Eif4g3Q80XI3 1579 aaKnown RBP21.76■■□□□ 1.07
Nde1-201ENSMUST00000023359 Ube2uB1AUC4 352 aa21.72■■□□□ 1.07
Nde1-201ENSMUST00000023359 Arhgef11Q68FM7 1552 aa21.71■■□□□ 1.07
Nde1-201ENSMUST00000023359 Ccer2J3QPU5 274 aa21.71■■□□□ 1.07
Nde1-201ENSMUST00000023359 Arhgap31A6X8Z5 1425 aa21.7■■□□□ 1.06
Nde1-201ENSMUST00000023359 Map3k4O08648 1597 aa21.68■■□□□ 1.06
Nde1-201ENSMUST00000023359 Cdc42bpaQ3UU96 1719 aa21.67■■□□□ 1.06
Nde1-201ENSMUST00000023359 UacaQ8CGB3 1411 aa21.66■■□□□ 1.06
Nde1-201ENSMUST00000023359 Dnmt1P13864 1620 aaKnown RBP21.65■■□□□ 1.06
Nde1-201ENSMUST00000023359 Ankrd36D3Z4K0 1415 aa21.65■■□□□ 1.06
Nde1-201ENSMUST00000023359 Dennd4bQ3U1Y4 1499 aa21.64■■□□□ 1.05
Nde1-201ENSMUST00000023359 Neo1P97798 1493 aa21.63■■□□□ 1.05
Nde1-201ENSMUST00000023359 Arhgef40Q3UPH7 1517 aa21.63■■□□□ 1.05
Nde1-201ENSMUST00000023359 Zcchc11B2RX14 1644 aaKnown RBP21.63■■□□□ 1.05
Nde1-201ENSMUST00000023359 Ccdc141E9Q8Q6 1531 aa21.62■■□□□ 1.05
Nde1-201ENSMUST00000023359 Ncoa2Q61026 1462 aa21.61■■□□□ 1.05
Nde1-201ENSMUST00000023359 AknaQ80VW7 1404 aa21.6■■□□□ 1.05
Nde1-201ENSMUST00000023359 Hspa5P20029 655 aaKnown RBP21.6■■□□□ 1.05
Nde1-201ENSMUST00000023359 Cabp1Q9JLK7 227 aa21.6■■□□□ 1.05
Nde1-201ENSMUST00000023359 Mroh2aD3Z750 1679 aa21.6■■□□□ 1.05
Nde1-201ENSMUST00000023359 Kiaa1551Q5DTW7 1521 aa21.59■■□□□ 1.05
Nde1-201ENSMUST00000023359 Kdm6bQ5NCY0 1641 aa21.59■■□□□ 1.05
Nde1-201ENSMUST00000023359 Fkbp15Q6P9Q6 1216 aaKnown RBP21.59■■□□□ 1.05
Nde1-201ENSMUST00000023359 Abcc5Q9R1X5 1436 aa21.59■■□□□ 1.05
Nde1-201ENSMUST00000023359 Magi1Q6RHR9 1471 aa21.59■■□□□ 1.05
Nde1-201ENSMUST00000023359 Adcy10Q8C0T9 1614 aa21.59■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms