RNA–Protein interactions for RNA: ENSMUST00000021761.12

Trim27-201, Transcript of Zinc finger protein RFP, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim27, Length 4,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-201ENSMUST00000021761 DaxxO35613 739 aa19.06■□□□□ 0.64
Trim27-201ENSMUST00000021761 Ifnlr1Q8CGK5 535 aa19.04■□□□□ 0.64
Trim27-201ENSMUST00000021761 ScribQ80U72 1612 aa19.04■□□□□ 0.64
Trim27-201ENSMUST00000021761 Kif15Q6P9L6 1387 aa19.03■□□□□ 0.64
Trim27-201ENSMUST00000021761 Rad21Q61550 635 aaKnown RBP19.01■□□□□ 0.63
Trim27-201ENSMUST00000021761 Erich6D3Z6S9 713 aa18.99■□□□□ 0.63
Trim27-201ENSMUST00000021761 Sin3aQ60520 1274 aaKnown RBP18.98■□□□□ 0.63
Trim27-201ENSMUST00000021761 ArxO35085 564 aa18.97■□□□□ 0.63
Trim27-201ENSMUST00000021761 Smarca2Q6DIC0 1577 aa18.94■□□□□ 0.62
Trim27-201ENSMUST00000021761 Rgl3Q3UYI5 709 aa18.94■□□□□ 0.62
Trim27-201ENSMUST00000021761 Wwc2Q6NXJ0 1187 aa18.89■□□□□ 0.61
Trim27-201ENSMUST00000021761 CftrP26361 1476 aa18.89■□□□□ 0.61
Trim27-201ENSMUST00000021761 Rapgef2Q8CHG7 1496 aa18.88■□□□□ 0.61
Trim27-201ENSMUST00000021761 Sycp2Q9CUU3 1500 aa18.85■□□□□ 0.61
Trim27-201ENSMUST00000021761 Slc4a3P16283 1227 aa18.85■□□□□ 0.61
Trim27-201ENSMUST00000021761 Polr3glQ8R0C0 218 aa18.85■□□□□ 0.61
Trim27-201ENSMUST00000021761 Grwd1Q810D6 446 aaKnown RBP18.84■□□□□ 0.61
Trim27-201ENSMUST00000021761 Synj1Q8CHC4 1574 aa18.83■□□□□ 0.6
Trim27-201ENSMUST00000021761 Ofd1Q80Z25 1017 aa18.81■□□□□ 0.6
Trim27-201ENSMUST00000021761 Fmn1Q05860 1466 aa18.81■□□□□ 0.6
Trim27-201ENSMUST00000021761 Nlrp6Q91WS2 869 aa18.79■□□□□ 0.6
Trim27-201ENSMUST00000021761 Rangap1P46061 589 aaKnown RBP18.78■□□□□ 0.6
Trim27-201ENSMUST00000021761 Crybg2B7ZCC2 1516 aa18.78■□□□□ 0.6
Trim27-201ENSMUST00000021761 Gm13697A2AK42 830 aa18.77■□□□□ 0.59
Trim27-201ENSMUST00000021761 Bcl11aQ9QYE3 773 aa18.67■□□□□ 0.58
Trim27-201ENSMUST00000021761 Nolc1E9Q5C9 702 aaKnown RBP18.65■□□□□ 0.58
Trim27-201ENSMUST00000021761 Ccdc18Q640L5 1455 aa18.65■□□□□ 0.58
Trim27-201ENSMUST00000021761 Exoc6Q8R313 802 aa18.63■□□□□ 0.57
Trim27-201ENSMUST00000021761 Apbb1Q9QXJ1 710 aa18.63■□□□□ 0.57
Trim27-201ENSMUST00000021761 Aebp1Q640N1 1128 aa18.63■□□□□ 0.57
Trim27-201ENSMUST00000021761 Card11Q8CIS0 1159 aa18.62■□□□□ 0.57
Trim27-201ENSMUST00000021761 Baz1bQ9Z277 1479 aa18.62■□□□□ 0.57
Trim27-201ENSMUST00000021761 Supt16hQ920B9 1047 aa18.62■□□□□ 0.57
Trim27-201ENSMUST00000021761 Atp1b4Q99ME6 356 aa18.62■□□□□ 0.57
Trim27-201ENSMUST00000021761 Mia2Q91ZV0 1396 aa18.59■□□□□ 0.57
Trim27-201ENSMUST00000021761 Pkd2O35245 966 aa18.59■□□□□ 0.57
Trim27-201ENSMUST00000021761 CanxP35564 591 aaKnown RBP18.56■□□□□ 0.56
Trim27-201ENSMUST00000021761 Arhgap27A2AB59 869 aa18.56■□□□□ 0.56
Trim27-201ENSMUST00000021761 Cabp1Q9JLK7 227 aa18.56■□□□□ 0.56
Trim27-201ENSMUST00000021761 Upf2A2AT37 1269 aaKnown RBP18.55■□□□□ 0.56
Trim27-201ENSMUST00000021761 Kdm2aP59997 1161 aa18.55■□□□□ 0.56
Trim27-201ENSMUST00000021761 Trim26Q99PN3 545 aa18.55■□□□□ 0.56
Trim27-201ENSMUST00000021761 Dbr1Q923B1 550 aa18.54■□□□□ 0.56
Trim27-201ENSMUST00000021761 Mphosph9A6H5Y1 991 aa18.52■□□□□ 0.56
Trim27-201ENSMUST00000021761 B4galnt3Q6L8S8 986 aa18.5■□□□□ 0.55
Trim27-201ENSMUST00000021761 Hsp90aa1P07901 733 aaKnown RBP18.5■□□□□ 0.55
Trim27-201ENSMUST00000021761 Trim30dE9PWL0 497 aa18.48■□□□□ 0.55
Trim27-201ENSMUST00000021761 Neurod2Q62414 383 aa18.48■□□□□ 0.55
Trim27-201ENSMUST00000021761 Rundc1Q0VDN7 615 aa18.48■□□□□ 0.55
Trim27-201ENSMUST00000021761 Cwc22Q8C5N3 908 aaKnown RBP18.46■□□□□ 0.55
Trim27-201ENSMUST00000021761 Ccdc27Q3V036 639 aa18.44■□□□□ 0.54
Trim27-201ENSMUST00000021761 Mtus2Q3UHD3 1353 aa18.44■□□□□ 0.54
Trim27-201ENSMUST00000021761 Znf710Q3U288 666 aa18.43■□□□□ 0.54
Trim27-201ENSMUST00000021761 Trak1Q6PD31 939 aa18.43■□□□□ 0.54
Trim27-201ENSMUST00000021761 Rrp7aQ9D1C9 280 aaKnown RBP18.43■□□□□ 0.54
Trim27-201ENSMUST00000021761 Kif27Q7M6Z4 1394 aa18.42■□□□□ 0.54
Trim27-201ENSMUST00000021761 Ercc6F8VPZ5 1481 aa18.42■□□□□ 0.54
Trim27-201ENSMUST00000021761 Clstn2Q9ER65 966 aa18.42■□□□□ 0.54
Trim27-201ENSMUST00000021761 Fyco1Q8VDC1 1437 aa18.41■□□□□ 0.54
Trim27-201ENSMUST00000021761 Arhgap35Q91YM2 1499 aa18.4■□□□□ 0.54
Trim27-201ENSMUST00000021761 Mroh3A0A1D5RM54 893 aa18.4■□□□□ 0.54
Trim27-201ENSMUST00000021761 CntlnA2AM05 1397 aa18.38■□□□□ 0.53
Trim27-201ENSMUST00000021761 Smg6P61406 1418 aaKnown RBP18.36■□□□□ 0.53
Trim27-201ENSMUST00000021761 Arid4bA2CG63 1314 aaKnown RBP18.35■□□□□ 0.53
Trim27-201ENSMUST00000021761 Tcerg1Q8CGF7 1100 aaKnown RBP18.34■□□□□ 0.53
Trim27-201ENSMUST00000021761 Hsp90ab1P11499 724 aaKnown RBP18.34■□□□□ 0.53
Trim27-201ENSMUST00000021761 Armcx1Q9CX83 456 aa18.33■□□□□ 0.53
Trim27-201ENSMUST00000021761 Pds5bQ4VA53 1446 aaKnown RBP18.33■□□□□ 0.52
Trim27-201ENSMUST00000021761 Vsig10D3YX43 558 aa18.32■□□□□ 0.52
Trim27-201ENSMUST00000021761 Gm13695A2AK44 830 aa18.32■□□□□ 0.52
Trim27-201ENSMUST00000021761 Map4P27546 1125 aaKnown RBP18.31■□□□□ 0.52
Trim27-201ENSMUST00000021761 4930567H17RikQ3V0K5 233 aa18.31■□□□□ 0.52
Trim27-201ENSMUST00000021761 Cc2d2aQ8CFW7 1633 aa18.31■□□□□ 0.52
Trim27-201ENSMUST00000021761 Cttnbp2B9EJA2 1648 aa18.31■□□□□ 0.52
Trim27-201ENSMUST00000021761 Ccnb3Q810T2 1396 aa18.3■□□□□ 0.52
Trim27-201ENSMUST00000021761 Cux2P70298 1426 aa18.3■□□□□ 0.52
Trim27-201ENSMUST00000021761 Ecm2Q5FW85 670 aa18.29■□□□□ 0.52
Trim27-201ENSMUST00000021761 Smarca4Q3TKT4 1613 aaKnown RBP18.29■□□□□ 0.52
Trim27-201ENSMUST00000021761 Rpap1Q80TE0 1409 aa18.29■□□□□ 0.52
Trim27-201ENSMUST00000021761 Cnga1P29974 684 aa18.27■□□□□ 0.52
Trim27-201ENSMUST00000021761 Spryd3E9Q9B3 442 aa18.26■□□□□ 0.51
Trim27-201ENSMUST00000021761 Ncapd3Q6ZQK0 1506 aa18.26■□□□□ 0.51
Trim27-201ENSMUST00000021761 Hdac5Q9Z2V6 1113 aa18.25■□□□□ 0.51
Trim27-201ENSMUST00000021761 ChgaP26339 463 aaKnown RBP18.25■□□□□ 0.51
Trim27-201ENSMUST00000021761 Zscan21Q07231 555 aa18.25■□□□□ 0.51
Trim27-201ENSMUST00000021761 Gm20521D3Z5F7 333 aa18.24■□□□□ 0.51
Trim27-201ENSMUST00000021761 Carmil1Q6EDY6 1374 aa18.24■□□□□ 0.51
Trim27-201ENSMUST00000021761 Ifit1bl1D3Z6F0 470 aa18.23■□□□□ 0.51
Trim27-201ENSMUST00000021761 Arap1Q4LDD4 1452 aa18.22■□□□□ 0.51
Trim27-201ENSMUST00000021761 Usp47Q8BY87 1376 aa18.22■□□□□ 0.51
Trim27-201ENSMUST00000021761 Stk24Q99KH8 431 aa18.22■□□□□ 0.51
Trim27-201ENSMUST00000021761 Chmp5Q9D7S9 219 aa18.22■□□□□ 0.51
Trim27-201ENSMUST00000021761 Plppr3Q7TPB0 716 aa18.21■□□□□ 0.51
Trim27-201ENSMUST00000021761 Zfp644E9QA22 1323 aa18.21■□□□□ 0.51
Trim27-201ENSMUST00000021761 Top2aQ01320 1528 aaKnown RBP18.21■□□□□ 0.51
Trim27-201ENSMUST00000021761 DekQ7TNV0 380 aaKnown RBP18.2■□□□□ 0.5
Trim27-201ENSMUST00000021761 Mak16Q8BGS0 296 aaKnown RBP18.18■□□□□ 0.5
Trim27-201ENSMUST00000021761 Atad2bE9Q166 1460 aaKnown RBP18.18■□□□□ 0.5
Trim27-201ENSMUST00000021761 PtprkP35822 1457 aa18.18■□□□□ 0.5
Trim27-201ENSMUST00000021761 Ccdc9Q8VC31 543 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 86.6 ms