RNA–Protein interactions for RNA: ENSMUST00000021335.6

Scfd1-201, Transcript of Sec1 family domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scfd1, Length 2,096 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1-201ENSMUST00000021335 Hnrnpul2Q00PI9 745 aaKnown RBP11□□□□□ -0.65
Scfd1-201ENSMUST00000021335 Rsph6aQ8CDR2 708 aa10.97□□□□□ -0.65
Scfd1-201ENSMUST00000021335 Map4k4P97820 1233 aaKnown RBP10.96□□□□□ -0.65
Scfd1-201ENSMUST00000021335 Stk25Q9Z2W1 426 aa10.96□□□□□ -0.65
Scfd1-201ENSMUST00000021335 Pdap1Q3UHX2 181 aaKnown RBP10.94□□□□□ -0.66
Scfd1-201ENSMUST00000021335 P3h3Q8CG70 732 aa10.94□□□□□ -0.66
Scfd1-201ENSMUST00000021335 Zbtb38Q3LR78 1197 aa10.93□□□□□ -0.66
Scfd1-201ENSMUST00000021335 CrebzfQ91ZR3 358 aa10.91□□□□□ -0.66
Scfd1-201ENSMUST00000021335 Chrm1P12657 460 aa10.89□□□□□ -0.67
Scfd1-201ENSMUST00000021335 Stk24Q99KH8 431 aa10.88□□□□□ -0.67
Scfd1-201ENSMUST00000021335 Spryd3E9Q9B3 442 aa10.88□□□□□ -0.67
Scfd1-201ENSMUST00000021335 Ubap1lG3UW59 384 aa10.84□□□□□ -0.67
Scfd1-201ENSMUST00000021335 Dnajc5P60904 198 aa10.84□□□□□ -0.67
Scfd1-201ENSMUST00000021335 ChgaP26339 463 aaKnown RBP10.82□□□□□ -0.68
Scfd1-201ENSMUST00000021335 Kank3Q9Z1P7 791 aa10.82□□□□□ -0.68
Scfd1-201ENSMUST00000021335 Stag3O70576 1240 aa10.8□□□□□ -0.68
Scfd1-201ENSMUST00000021335 Mier1Q5UAK0 511 aa10.78□□□□□ -0.68
Scfd1-201ENSMUST00000021335 Pcdhb17Q91VD8 799 aa10.78□□□□□ -0.68
Scfd1-201ENSMUST00000021335 Pip4p2Q9CZX7 257 aa10.76□□□□□ -0.69
Scfd1-201ENSMUST00000021335 SnphQ80U23 495 aa10.75□□□□□ -0.69
Scfd1-201ENSMUST00000021335 Tmem132aQ922P8 1018 aa10.75□□□□□ -0.69
Scfd1-201ENSMUST00000021335 Prr29B1ARI9 187 aa10.73□□□□□ -0.69
Scfd1-201ENSMUST00000021335 VaspP70460 375 aaKnown RBP10.73□□□□□ -0.69
Scfd1-201ENSMUST00000021335 Sgip1Q8VD37 806 aa10.73□□□□□ -0.69
Scfd1-201ENSMUST00000021335 Kcnn1Q9EQR3 537 aa10.72□□□□□ -0.69
Scfd1-201ENSMUST00000021335 Slc7a3P70423 618 aa10.71□□□□□ -0.69
Scfd1-201ENSMUST00000021335 Vsig10D3YX43 558 aa10.7□□□□□ -0.7
Scfd1-201ENSMUST00000021335 Cacnb1Q8R3Z5 597 aa10.7□□□□□ -0.7
Scfd1-201ENSMUST00000021335 Ndufv2Q9D6J6 248 aa10.7□□□□□ -0.7
Scfd1-201ENSMUST00000021335 Arhgef1Q61210 920 aaKnown RBP10.69□□□□□ -0.7
Scfd1-201ENSMUST00000021335 Ric3Q8BPM6 367 aa10.69□□□□□ -0.7
Scfd1-201ENSMUST00000021335 Cnksr2Q80YA9 1032 aa10.63□□□□□ -0.71
Scfd1-201ENSMUST00000021335 Znf703P0CL69 594 aa10.61□□□□□ -0.71
Scfd1-201ENSMUST00000021335 Slc24a3Q99PD7 645 aa10.6□□□□□ -0.71
Scfd1-201ENSMUST00000021335 E9Q0B3 247 aa10.59□□□□□ -0.71
Scfd1-201ENSMUST00000021335 Gpr37l1Q99JG2 481 aa10.59□□□□□ -0.71
Scfd1-201ENSMUST00000021335 Ildr2B5TVM2 661 aa10.58□□□□□ -0.72
Scfd1-201ENSMUST00000021335 1700006A11RikB9EHI3 544 aa10.58□□□□□ -0.72
Scfd1-201ENSMUST00000021335 Dok7Q18PE0 504 aa10.55□□□□□ -0.72
Scfd1-201ENSMUST00000021335 Ak7Q9D2H2 614 aa10.54□□□□□ -0.72
Scfd1-201ENSMUST00000021335 Cypt1Q8CH20 168 aa10.53□□□□□ -0.72
Scfd1-201ENSMUST00000021335 Bclaf1Q8K019 919 aaKnown RBP10.51□□□□□ -0.73
Scfd1-201ENSMUST00000021335 Tulp1Q9Z273 543 aa10.51□□□□□ -0.73
Scfd1-201ENSMUST00000021335 Znf579Q80VM4 562 aa10.49□□□□□ -0.73
Scfd1-201ENSMUST00000021335 Erich4Q3UNU4 136 aa10.48□□□□□ -0.73
Scfd1-201ENSMUST00000021335 Zc3h15Q3TIV5 426 aaKnown RBP10.47□□□□□ -0.73
Scfd1-201ENSMUST00000021335 Znf516Q7TSH3 1157 aa10.47□□□□□ -0.73
Scfd1-201ENSMUST00000021335 Prim1P20664 417 aa10.46□□□□□ -0.73
Scfd1-201ENSMUST00000021335 Npm1Q61937 292 aaKnown RBP10.46□□□□□ -0.74
Scfd1-201ENSMUST00000021335 Kdm2aP59997 1161 aa10.45□□□□□ -0.74
Scfd1-201ENSMUST00000021335 Apba2P98084 750 aa10.43□□□□□ -0.74
Scfd1-201ENSMUST00000021335 Clcn6O35454 870 aa10.42□□□□□ -0.74
Scfd1-201ENSMUST00000021335 Speer2E9Q9U2 264 aa10.41□□□□□ -0.74
Scfd1-201ENSMUST00000021335 Pdzrn4E9PUZ9 1014 aa10.4□□□□□ -0.74
Scfd1-201ENSMUST00000021335 Ggt6Q6PDE7 497 aa10.4□□□□□ -0.75
Scfd1-201ENSMUST00000021335 Zranb1Q7M760 708 aa10.4□□□□□ -0.75
Scfd1-201ENSMUST00000021335 Ddx11Q6AXC6 880 aa10.39□□□□□ -0.75
Scfd1-201ENSMUST00000021335 IncenpQ9WU62 880 aa10.39□□□□□ -0.75
Scfd1-201ENSMUST00000021335 Nap1l5Q9JJF0 156 aa10.35□□□□□ -0.75
Scfd1-201ENSMUST00000021335 Pcdhb20Q91XZ9 799 aa10.34□□□□□ -0.75
Scfd1-201ENSMUST00000021335 Tox2A2A472 547 aa10.33□□□□□ -0.76
Scfd1-201ENSMUST00000021335 Pde8bE9Q4S1 865 aa10.33□□□□□ -0.76
Scfd1-201ENSMUST00000021335 Kank4Q6P9J5 1016 aa10.33□□□□□ -0.76
Scfd1-201ENSMUST00000021335 Gm45233A0A0N4SVE0 221 aa10.32□□□□□ -0.76
Scfd1-201ENSMUST00000021335 Slain2Q8CI08 581 aa10.32□□□□□ -0.76
Scfd1-201ENSMUST00000021335 Ciz1Q8VEH2 845 aa10.31□□□□□ -0.76
Scfd1-201ENSMUST00000021335 Dhx30Q99PU8 1217 aaKnown RBP10.3□□□□□ -0.76
Scfd1-201ENSMUST00000021335 Bcl2l13P59017 434 aa10.3□□□□□ -0.76
Scfd1-201ENSMUST00000021335 E2f4Q8R0K9 410 aa10.29□□□□□ -0.76
Scfd1-201ENSMUST00000021335 Fam117aQ7TNF9 451 aa10.26□□□□□ -0.77
Scfd1-201ENSMUST00000021335 Fkbp4P30416 458 aa10.25□□□□□ -0.77
Scfd1-201ENSMUST00000021335 Evi5P97366 809 aa10.25□□□□□ -0.77
Scfd1-201ENSMUST00000021335 Scaf1Q5U4C3 1256 aaKnown RBP10.25□□□□□ -0.77
Scfd1-201ENSMUST00000021335 Mllt3A2AM29 569 aa10.24□□□□□ -0.77
Scfd1-201ENSMUST00000021335 ArxO35085 564 aa10.22□□□□□ -0.77
Scfd1-201ENSMUST00000021335 OsbpQ3B7Z2 805 aa10.21□□□□□ -0.77
Scfd1-201ENSMUST00000021335 Jph4Q80WT0 628 aa10.2□□□□□ -0.78
Scfd1-201ENSMUST00000021335 TprnA2AI08 749 aaKnown RBP10.18□□□□□ -0.78
Scfd1-201ENSMUST00000021335 Ripply1Q2WG77 201 aa10.18□□□□□ -0.78
Scfd1-201ENSMUST00000021335 DiexfQ8BTT6 772 aaKnown RBP10.18□□□□□ -0.78
Scfd1-201ENSMUST00000021335 Map3k10Q66L42 940 aa10.17□□□□□ -0.78
Scfd1-201ENSMUST00000021335 Sptlc1O35704 473 aa10.16□□□□□ -0.78
Scfd1-201ENSMUST00000021335 Lrrc14bQ3UJB3 510 aa10.16□□□□□ -0.78
Scfd1-201ENSMUST00000021335 Otop3Q80UF9 577 aa10.16□□□□□ -0.78
Scfd1-201ENSMUST00000021335 Znf710Q3U288 666 aa10.15□□□□□ -0.78
Scfd1-201ENSMUST00000021335 Rtl5Q5DTT4 599 aa10.15□□□□□ -0.78
Scfd1-201ENSMUST00000021335 UbtfP25976 765 aaKnown RBP10.14□□□□□ -0.79
Scfd1-201ENSMUST00000021335 Pdia6Q922R8 440 aaKnown RBP10.14□□□□□ -0.79
Scfd1-201ENSMUST00000021335 Bcl11bQ99PV8 884 aa10.14□□□□□ -0.79
Scfd1-201ENSMUST00000021335 Irf6P97431 467 aa10.13□□□□□ -0.79
Scfd1-201ENSMUST00000021335 Actn4P57780 912 aaKnown RBP10.13□□□□□ -0.79
Scfd1-201ENSMUST00000021335 ZyxQ62523 564 aa10.12□□□□□ -0.79
Scfd1-201ENSMUST00000021335 Ankrd65F6YK91 380 aa10.1□□□□□ -0.79
Scfd1-201ENSMUST00000021335 Irx6Q9ER75 438 aa10.1□□□□□ -0.79
Scfd1-201ENSMUST00000021335 Slc12a5Q91V14 1138 aa10.09□□□□□ -0.79
Scfd1-201ENSMUST00000021335 Prr7Q3V0I2 269 aa10.08□□□□□ -0.8
Scfd1-201ENSMUST00000021335 Tpcn2Q8BWC0 731 aa10.08□□□□□ -0.8
Scfd1-201ENSMUST00000021335 Pak3Q61036 559 aa10.08□□□□□ -0.8
Scfd1-201ENSMUST00000021335 Rasgrp4Q8BTM9 673 aa10.08□□□□□ -0.8
Scfd1-201ENSMUST00000021335 Eya1P97767 591 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms