RNA–Protein interactions for RNA: ENSMUST00000004507.10

Ddx56-201, Transcript of Probable ATP-dependent RNA helicase DDX56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx56, Length 1,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56-201ENSMUST00000004507 Map3k1P53349 1493 aa17.24■□□□□ 0.35
Ddx56-201ENSMUST00000004507 Nup160Q9Z0W3 1402 aaKnown RBP17.23■□□□□ 0.35
Ddx56-201ENSMUST00000004507 Rusc2Q80U22 1514 aa17.23■□□□□ 0.35
Ddx56-201ENSMUST00000004507 Pla2r1Q62028 1487 aa17.21■□□□□ 0.35
Ddx56-201ENSMUST00000004507 Cc2d2bA0A286YDU8 1405 aa17.17■□□□□ 0.34
Ddx56-201ENSMUST00000004507 AqrQ8CFQ3 1481 aaKnown RBP17.15■□□□□ 0.34
Ddx56-201ENSMUST00000004507 Carmil1Q6EDY6 1374 aa17.15■□□□□ 0.34
Ddx56-201ENSMUST00000004507 Clip1Q922J3 1391 aa17.14■□□□□ 0.33
Ddx56-201ENSMUST00000004507 Gpatch8A2A6A1 1505 aa17.12■□□□□ 0.33
Ddx56-201ENSMUST00000004507 EprsQ8CGC7 1512 aaKnown RBP17.08■□□□□ 0.33
Ddx56-201ENSMUST00000004507 UbtfP25976 765 aaKnown RBP17.08■□□□□ 0.32
Ddx56-201ENSMUST00000004507 WizO88286 1684 aaKnown RBP17.06■□□□□ 0.32
Ddx56-201ENSMUST00000004507 Polr1aO35134 1717 aaKnown RBP17.04■□□□□ 0.32
Ddx56-201ENSMUST00000004507 Adamts12Q811B3 1600 aa17.04■□□□□ 0.32
Ddx56-201ENSMUST00000004507 Cux1P53564 1515 aa17.03■□□□□ 0.32
Ddx56-201ENSMUST00000004507 Abca16E9PWJ7 1678 aa17.03■□□□□ 0.32
Ddx56-201ENSMUST00000004507 TchhA0A0B4J1F9 1599 aa17.01■□□□□ 0.31
Ddx56-201ENSMUST00000004507 PxdnQ3UQ28 1475 aa16.99■□□□□ 0.31
Ddx56-201ENSMUST00000004507 Ankrd26Q811D2 1581 aa16.98■□□□□ 0.31
Ddx56-201ENSMUST00000004507 CadpsQ80TJ1 1355 aa16.96■□□□□ 0.31
Ddx56-201ENSMUST00000004507 Gm7298A0A0N4SVU1 1476 aa16.95■□□□□ 0.3
Ddx56-201ENSMUST00000004507 Rpap1Q80TE0 1409 aa16.95■□□□□ 0.3
Ddx56-201ENSMUST00000004507 Fyco1Q8VDC1 1437 aa16.95■□□□□ 0.3
Ddx56-201ENSMUST00000004507 Abcc2Q8VI47 1543 aa16.94■□□□□ 0.3
Ddx56-201ENSMUST00000004507 Setd5Q5XJV7 1441 aa16.94■□□□□ 0.3
Ddx56-201ENSMUST00000004507 Arhgap27A2AB59 869 aa16.93■□□□□ 0.3
Ddx56-201ENSMUST00000004507 Eea1Q8BL66 1411 aa16.93■□□□□ 0.3
Ddx56-201ENSMUST00000004507 Abca5Q8K448 1642 aa16.93■□□□□ 0.3
Ddx56-201ENSMUST00000004507 Fgd6Q69ZL1 1399 aa16.92■□□□□ 0.3
Ddx56-201ENSMUST00000004507 Sall2Q9QX96 1004 aa16.91■□□□□ 0.3
Ddx56-201ENSMUST00000004507 Erich3F6QRE9 1637 aa16.91■□□□□ 0.3
Ddx56-201ENSMUST00000004507 Soga1E1U8D0 1418 aa16.89■□□□□ 0.29
Ddx56-201ENSMUST00000004507 Las1lA2BE28 776 aaKnown RBP16.88■□□□□ 0.29
Ddx56-201ENSMUST00000004507 Ncapd3Q6ZQK0 1506 aa16.88■□□□□ 0.29
Ddx56-201ENSMUST00000004507 Dnmt1P13864 1620 aaKnown RBP16.88■□□□□ 0.29
Ddx56-201ENSMUST00000004507 AknaQ80VW7 1404 aa16.87■□□□□ 0.29
Ddx56-201ENSMUST00000004507 Ap3b1Q9Z1T1 1105 aa16.87■□□□□ 0.29
Ddx56-201ENSMUST00000004507 Shroom2A2ALU4 1481 aa16.86■□□□□ 0.29
Ddx56-201ENSMUST00000004507 Arap1Q4LDD4 1452 aa16.85■□□□□ 0.29
Ddx56-201ENSMUST00000004507 Map3k4O08648 1597 aa16.85■□□□□ 0.29
Ddx56-201ENSMUST00000004507 Lmo7E9PYF4 1699 aaKnown RBP16.85■□□□□ 0.29
Ddx56-201ENSMUST00000004507 BC005561E9Q5E2 1589 aa16.84■□□□□ 0.29
Ddx56-201ENSMUST00000004507 Plekhg3Q4VAC9 1341 aa16.84■□□□□ 0.29
Ddx56-201ENSMUST00000004507 Pelp1Q9DBD5 1123 aaKnown RBP16.83■□□□□ 0.28
Ddx56-201ENSMUST00000004507 Pcf11G3X9Z4 1553 aa16.83■□□□□ 0.28
Ddx56-201ENSMUST00000004507 Neurod1Q60867 357 aa16.82■□□□□ 0.28
Ddx56-201ENSMUST00000004507 Neo1P97798 1493 aa16.81■□□□□ 0.28
Ddx56-201ENSMUST00000004507 Arhgef5E9Q7D5 1581 aa16.81■□□□□ 0.28
Ddx56-201ENSMUST00000004507 Pabpn1Q8CCS6 302 aaKnown RBP16.81■□□□□ 0.28
Ddx56-201ENSMUST00000004507 Slx4Q6P1D7 1565 aa16.8■□□□□ 0.28
Ddx56-201ENSMUST00000004507 Aebp1Q640N1 1128 aa16.8■□□□□ 0.28
Ddx56-201ENSMUST00000004507 WrnO09053 1401 aa16.8■□□□□ 0.28
Ddx56-201ENSMUST00000004507 Abcc1O35379 1528 aa16.77■□□□□ 0.28
Ddx56-201ENSMUST00000004507 Chd1P40201 1711 aa16.76■□□□□ 0.27
Ddx56-201ENSMUST00000004507 BlmO88700 1416 aa16.75■□□□□ 0.27
Ddx56-201ENSMUST00000004507 TonslQ6NZL6 1363 aa16.73■□□□□ 0.27
Ddx56-201ENSMUST00000004507 Tiam1Q60610 1591 aa16.72■□□□□ 0.27
Ddx56-201ENSMUST00000004507 Wdr66E9Q743 1299 aa16.72■□□□□ 0.27
Ddx56-201ENSMUST00000004507 Aebp2Q9Z248 504 aaKnown RBP16.72■□□□□ 0.27
Ddx56-201ENSMUST00000004507 Zcchc11B2RX14 1644 aaKnown RBP16.72■□□□□ 0.27
Ddx56-201ENSMUST00000004507 ClspnQ80YR7 1315 aa16.71■□□□□ 0.27
Ddx56-201ENSMUST00000004507 Gm14025A2AP89 1413 aa16.7■□□□□ 0.26
Ddx56-201ENSMUST00000004507 Arhgef12Q8R4H2 1543 aaKnown RBP16.69■□□□□ 0.26
Ddx56-201ENSMUST00000004507 CntlnA2AM05 1397 aa16.69■□□□□ 0.26
Ddx56-201ENSMUST00000004507 Kif27Q7M6Z4 1394 aa16.69■□□□□ 0.26
Ddx56-201ENSMUST00000004507 Jph4Q80WT0 628 aa16.69■□□□□ 0.26
Ddx56-201ENSMUST00000004507 Naip1Q9QWK5 1403 aa16.67■□□□□ 0.26
Ddx56-201ENSMUST00000004507 Kdm5bQ80Y84 1544 aa16.67■□□□□ 0.26
Ddx56-201ENSMUST00000004507 Gapvd1Q6PAR5 1458 aa16.65■□□□□ 0.26
Ddx56-201ENSMUST00000004507 Arhgap31A6X8Z5 1425 aa16.64■□□□□ 0.25
Ddx56-201ENSMUST00000004507 Rrbp1Q99PL5 1605 aaKnown RBP16.64■□□□□ 0.25
Ddx56-201ENSMUST00000004507 Rapgef6Q5NCJ1 1609 aa16.63■□□□□ 0.25
Ddx56-201ENSMUST00000004507 Peg3Q3URU2 1571 aa16.63■□□□□ 0.25
Ddx56-201ENSMUST00000004507 Ythdc2B2RR83 1445 aaKnown RBP16.62■□□□□ 0.25
Ddx56-201ENSMUST00000004507 Lmod2Q3UHZ5 550 aa16.62■□□□□ 0.25
Ddx56-201ENSMUST00000004507 Fkbp15Q6P9Q6 1216 aaKnown RBP16.62■□□□□ 0.25
Ddx56-201ENSMUST00000004507 Ccdc141E9Q8Q6 1531 aa16.6■□□□□ 0.25
Ddx56-201ENSMUST00000004507 Cep170Q6A065 1588 aa16.6■□□□□ 0.25
Ddx56-201ENSMUST00000004507 Gm1043A0A140LJC2 1431 aa16.58■□□□□ 0.25
Ddx56-201ENSMUST00000004507 PtprtQ99M80 1454 aa16.57■□□□□ 0.24
Ddx56-201ENSMUST00000004507 Mroh2aD3Z750 1679 aa16.56■□□□□ 0.24
Ddx56-201ENSMUST00000004507 Col17a1Q07563 1470 aa16.55■□□□□ 0.24
Ddx56-201ENSMUST00000004507 Ncoa2Q61026 1462 aa16.55■□□□□ 0.24
Ddx56-201ENSMUST00000004507 Arhgef11Q68FM7 1552 aa16.55■□□□□ 0.24
Ddx56-201ENSMUST00000004507 Anks4bQ8K3X6 423 aa16.54■□□□□ 0.24
Ddx56-201ENSMUST00000004507 Ncoa3O09000 1398 aa16.52■□□□□ 0.23
Ddx56-201ENSMUST00000004507 Cul7Q8VE73 1689 aa16.5■□□□□ 0.23
Ddx56-201ENSMUST00000004507 Mug1P28665 1476 aa16.5■□□□□ 0.23
Ddx56-201ENSMUST00000004507 Magi1Q6RHR9 1471 aa16.5■□□□□ 0.23
Ddx56-201ENSMUST00000004507 Gm156Q58A37 223 aa16.49■□□□□ 0.23
Ddx56-201ENSMUST00000004507 Gcc2Q8CHG3 1679 aa16.49■□□□□ 0.23
Ddx56-201ENSMUST00000004507 Cdk11bP24788 784 aaKnown RBP16.47■□□□□ 0.23
Ddx56-201ENSMUST00000004507 Ifnlr1Q8CGK5 535 aa16.47■□□□□ 0.23
Ddx56-201ENSMUST00000004507 Adgrl3Q80TS3 1537 aa16.47■□□□□ 0.23
Ddx56-201ENSMUST00000004507 Cdc42bpaQ3UU96 1719 aa16.47■□□□□ 0.23
Ddx56-201ENSMUST00000004507 Nop58Q6DFW4 536 aaKnown RBP16.47■□□□□ 0.23
Ddx56-201ENSMUST00000004507 NexmifQ5DTT1 1515 aa16.47■□□□□ 0.23
Ddx56-201ENSMUST00000004507 NhsB1AV60 1647 aa16.45■□□□□ 0.22
Ddx56-201ENSMUST00000004507 Prex2Q3LAC4 1598 aa16.45■□□□□ 0.22
Ddx56-201ENSMUST00000004507 AI481877A2ALV5 1481 aa16.45■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms