RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	LINC00305	Q7Z4B0	112 aa		5.97	□□□□□ -1.45
RTTN-223	ENST00000640931	ABCA1	O95477	2261 aa		5.96	□□□□□ -1.46
RTTN-223	ENST00000640931		H3BTX0	84 aa		5.96	□□□□□ -1.46
RTTN-223	ENST00000640931	LST1	O00453	97 aa		5.96	□□□□□ -1.46
RTTN-223	ENST00000640931	TRIAP1	O43715	76 aa		5.96	□□□□□ -1.46
RTTN-223	ENST00000640931	COX7A2P2	O60397	106 aa		5.96	□□□□□ -1.46
RTTN-223	ENST00000640931	LMO4	P61968	165 aa		5.96	□□□□□ -1.46
RTTN-223	ENST00000640931	C10orf113	Q5VZT2	155 aa		5.96	□□□□□ -1.46
RTTN-223	ENST00000640931	DAZ4	Q86SG3	579 aa	Known RBP	5.96	□□□□□ -1.46
RTTN-223	ENST00000640931	EEF1AKMT3	Q96AZ1	226 aa		5.96	□□□□□ -1.46
RTTN-223	ENST00000640931	RPL27A	P46776	148 aa	Known RBP	5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	ERH	P84090	104 aa	Known RBP	5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	NDP	Q00604	133 aa		5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	DAZ2	Q13117	558 aa	Known RBP	5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	LAGE3	Q14657	143 aa		5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	PLGLA	Q15195	96 aa		5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	PATE2	Q6UY27	113 aa		5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	TIMM21	Q9BVV7	248 aa		5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	DAZ3	Q9NR90	486 aa	Known RBP	5.95	□□□□□ -1.46
RTTN-223	ENST00000640931		Q9UF83	564 aa		5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	SPG11	Q96JI7	2443 aa		5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	ODF3B	A8MYP8	253 aa		5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	PAX4	O43316	350 aa		5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	IGHV3-23	P01764	117 aa		5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	PAPPA-AS1	Q5QFB9	102 aa		5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	LYZL1	Q6UWQ5	148 aa		5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	FAM223A	Q8IWN6	122 aa		5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	MRPL53	Q96EL3	112 aa	Known RBP	5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	DPM3	Q9P2X0	92 aa		5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	ABCA2	Q9BZC7	2435 aa		5.95	□□□□□ -1.46
RTTN-223	ENST00000640931	IGLV2-18	A0A075B6J9	118 aa		5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	IGHV4-61	A0A0C4DH41	118 aa		5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	RBMY1B	A6NDE4	496 aa	Known RBP	5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	RBMY1E	A6NEQ0	496 aa	Known RBP	5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	SMKR1	H3BMG3	65 aa		5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	RBMY1D	P0C7P1	496 aa	Known RBP	5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	RBMY1A1	P0DJD3	496 aa	Known RBP	5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	RBMY1C	P0DJD4	496 aa		5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	SNRPD3	P62318	126 aa	Known RBP	5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	RBMY1F	Q15415	496 aa	Known RBP	5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	VSIG2	Q96IQ7	327 aa		5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	ICOS	Q9Y6W8	199 aa		5.94	□□□□□ -1.46
RTTN-223	ENST00000640931		U3KQE9	123 aa		5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	UBR5	O95071	2799 aa	Predicted RBP	5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	EIF4EBP3	O60516	100 aa	Predicted RBP	5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	TIMM17B	O60830	172 aa		5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	INAFM2	P0DMQ5	153 aa		5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	SAA4	P35542	130 aa		5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	XCL1	P47992	114 aa		5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	MAPK1IP1L	Q8NDC0	245 aa		5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	PRR25	Q96S07	402 aa		5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	XCL2	Q9UBD3	114 aa		5.94	□□□□□ -1.46
RTTN-223	ENST00000640931	IGHV4-30-2	A0A087WSY4	118 aa		5.93	□□□□□ -1.46
RTTN-223	ENST00000640931	FAM223B	A6NKX1	122 aa		5.93	□□□□□ -1.46
RTTN-223	ENST00000640931		H7BZZ5	65 aa		5.93	□□□□□ -1.46
RTTN-223	ENST00000640931		H7C2G1	150 aa		5.93	□□□□□ -1.46
RTTN-223	ENST00000640931	FSTL3	O95633	263 aa		5.93	□□□□□ -1.46
RTTN-223	ENST00000640931	GATA1	P15976	413 aa	Predicted RBP	5.93	□□□□□ -1.46
RTTN-223	ENST00000640931	ZNF469	Q96JG9	3925 aa	Predicted RBP	5.93	□□□□□ -1.46
RTTN-223	ENST00000640931	TRBV19	A0A075B6N1	114 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931		M0R1W7	72 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931	BCE1	O60756	84 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931	CCK	P06307	115 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931	KRTAP10-9	P60411	292 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931	SS18	Q15532	418 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931	HIST2H2BC	Q6DN03	193 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931	BRD3OS	Q6XYD6	125 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931	TMEM75	Q8N9X5	138 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931	RNF185	Q96GF1	192 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931	CCL19	Q99731	98 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931	POLQ	O75417	2590 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931	IGHV3OR16-8	A0A075B7F1	116 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931	IGLV2-11	P01706	119 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931		Q6ZS46	218 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931	PRNT	Q86SH4	94 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931	FANCD2OS	Q96PS1	177 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931		Q9H3A6	140 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931	CREBBP	Q92793	2442 aa		5.92	□□□□□ -1.46
RTTN-223	ENST00000640931		I3L2K1	104 aa		5.91	□□□□□ -1.46
RTTN-223	ENST00000640931	SPRY2	O43597	315 aa		5.91	□□□□□ -1.46
RTTN-223	ENST00000640931	EGR2	P11161	476 aa	Predicted RBP	5.91	□□□□□ -1.46
RTTN-223	ENST00000640931	LYPD5	Q6UWN5	251 aa		5.91	□□□□□ -1.46
RTTN-223	ENST00000640931	IGHV3-35	A0A0C4DH35	117 aa		5.9	□□□□□ -1.46
RTTN-223	ENST00000640931	IGHV1-58	A0A0C4DH39	117 aa		5.9	□□□□□ -1.46
RTTN-223	ENST00000640931	THAP8	Q8NA92	274 aa		5.9	□□□□□ -1.46
RTTN-223	ENST00000640931	KLHL30-AS1	Q8NEE0	82 aa		5.9	□□□□□ -1.46
RTTN-223	ENST00000640931	MOB4	Q9Y3A3	225 aa		5.9	□□□□□ -1.46
RTTN-223	ENST00000640931		K7EIM0	57 aa		5.9	□□□□□ -1.47
RTTN-223	ENST00000640931	PRSS2	P07478	247 aa		5.9	□□□□□ -1.47
RTTN-223	ENST00000640931	IGHV4-38-2	P0DP08	117 aa		5.9	□□□□□ -1.47
RTTN-223	ENST00000640931		Q8N6K4	173 aa		5.9	□□□□□ -1.47
RTTN-223	ENST00000640931	LINC00474	Q9P2X8	69 aa		5.9	□□□□□ -1.47
RTTN-223	ENST00000640931	ITPR3	Q14573	2671 aa		5.9	□□□□□ -1.47
RTTN-223	ENST00000640931	NDUFC1	O43677	76 aa		5.89	□□□□□ -1.47
RTTN-223	ENST00000640931	UBE2E1	P51965	193 aa		5.89	□□□□□ -1.47
RTTN-223	ENST00000640931	SUB1	P53999	127 aa	Known RBP eCLIP	5.89	□□□□□ -1.47
RTTN-223	ENST00000640931	LYZ	P61626	148 aa		5.89	□□□□□ -1.47
RTTN-223	ENST00000640931	KLKP1	Q107X0	134 aa		5.89	□□□□□ -1.47
RTTN-223	ENST00000640931	KHDC1L	Q5JSQ8	128 aa		5.89	□□□□□ -1.47
RTTN-223	ENST00000640931	PVRIG	Q6DKI7	326 aa		5.89	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms