RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 DAZ3Q9NR90 486 aaKnown RBP4.19□□□□□ -1.74
SCN3A-210ENST00000640652 NBEAL2Q6ZNJ1 2754 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 TINCRA0A1B0GVN0 87 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 A4D1N5 150 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 M0QY20 66 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 TCL1BO95988 128 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 RNASE3P12724 160 aaKnown RBP4.19□□□□□ -1.74
SCN3A-210ENST00000640652 BLCAPP62952 87 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 C11orf21Q9P2W6 132 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 TRBV7-3A0A075B6L6 115 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 LINC01548A6NM66 108 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 IGHV3-30P01768 117 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 IGHV3-30-5P0DP03 117 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 FLNBO75369 2602 aaKnown RBP4.18□□□□□ -1.74
SCN3A-210ENST00000640652 KLK9Q2XQG4 91 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 PRR9Q5T870 116 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 C20orf203Q8NBC4 194 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 TRBV6-5A0A0K0K1A5 114 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 PSMB8P28062 276 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 Q6ZUT4 128 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 Q71RC1 249 aaPredicted RBP4.18□□□□□ -1.74
SCN3A-210ENST00000640652 DCANP1Q8TF63 244 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 FBN2P35556 2912 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 TMEM86BQ8N661 226 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 A6NDX4 124 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 GAS8-AS1O95177 125 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 ACYP1P07311 99 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 TMEM95Q3KNT9 176 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 CFAP126Q5VTH2 177 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 NFE4Q86UQ8 179 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 PRIMA1Q86XR5 153 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 A0A0J9YY99 117 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 ADARB2-AS1A8MUL3 147 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 C4orf3Q8WVX3 66 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 TRAV13-2A0A0B4J235 113 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 IGLV1-40P01703 118 aa4.18□□□□□ -1.74
SCN3A-210ENST00000640652 COL12A1Q99715 3063 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 DEFB131AP59861 70 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 MAPKAPK5-AS1Q8N8E1 139 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 C9orf85Q96MD7 179 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 HECTD1Q9ULT8 2610 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 IGHV1-58A0A0C4DH39 117 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 H3BT86 120 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 UBE2D3P61077 147 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 UBE2D2P62837 147 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 IGHV4-59P01825 116 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 MIAQ16674 131 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 PYGO1Q9Y3Y4 419 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 SOCS3O14543 225 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 CARD19Q96LW7 228 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 M0QXV9 152 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 HERV-K104P63124 156 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 IGHV3-30-3P0DP02 117 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 NPC2P61916 151 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 APRG1Q8IVJ8 170 aa4.17□□□□□ -1.74
SCN3A-210ENST00000640652 A0A0J9YXY3 114 aa4.16□□□□□ -1.74
SCN3A-210ENST00000640652 TMEM223A0PJW6 202 aa4.16□□□□□ -1.74
SCN3A-210ENST00000640652 VSIG2Q96IQ7 327 aa4.16□□□□□ -1.74
SCN3A-210ENST00000640652 IGHV4-30-2A0A087WSY4 118 aa4.16□□□□□ -1.74
SCN3A-210ENST00000640652 POLR2KP53803 58 aaKnown RBP4.16□□□□□ -1.74
SCN3A-210ENST00000640652 POM121L12Q8N7R1 296 aa4.16□□□□□ -1.74
SCN3A-210ENST00000640652 DEFB104AQ8WTQ1 72 aa4.16□□□□□ -1.74
SCN3A-210ENST00000640652 IGIPA6NJ69 53 aa4.16□□□□□ -1.74
SCN3A-210ENST00000640652 TIMM17BO60830 172 aa4.16□□□□□ -1.74
SCN3A-210ENST00000640652 TRGV4A0A0C4DH28 118 aa4.16□□□□□ -1.74
SCN3A-210ENST00000640652 SPANXCQ9NY87 97 aa4.16□□□□□ -1.74
SCN3A-210ENST00000640652 TRAV8-3A0A0A6YYJ7 113 aa4.16□□□□□ -1.74
SCN3A-210ENST00000640652 K7EQG2 157 aa4.16□□□□□ -1.74
SCN3A-210ENST00000640652 UBE2D1P51668 147 aa4.16□□□□□ -1.74
SCN3A-210ENST00000640652 NSD1Q96L73 2696 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-210ENST00000640652 IGLV4-69A0A075B6H9 119 aa4.16□□□□□ -1.74
SCN3A-210ENST00000640652 K7EQD1 137 aa4.16□□□□□ -1.74
SCN3A-210ENST00000640652 MUSTN1Q8IVN3 82 aa4.15□□□□□ -1.74
SCN3A-210ENST00000640652 PHLDA1Q8WV24 401 aaPredicted RBP4.15□□□□□ -1.74
SCN3A-210ENST00000640652 TMEM243Q9BU79 118 aa4.15□□□□□ -1.74
SCN3A-210ENST00000640652 GHRHP01286 108 aa4.15□□□□□ -1.74
SCN3A-210ENST00000640652 DEFB112Q30KQ8 113 aa4.15□□□□□ -1.74
SCN3A-210ENST00000640652 TOMM7Q9P0U1 55 aa4.15□□□□□ -1.74
SCN3A-210ENST00000640652 TRAV13-1A0A0B4J241 112 aa4.15□□□□□ -1.75
SCN3A-210ENST00000640652 TRAV25A0A0B4J276 109 aa4.15□□□□□ -1.75
SCN3A-210ENST00000640652 S100A7L2Q5SY68 101 aa4.15□□□□□ -1.75
SCN3A-210ENST00000640652 SPAG8Q99932 426 aaPredicted RBP4.15□□□□□ -1.75
SCN3A-210ENST00000640652 Q9H8V8 135 aa4.15□□□□□ -1.75
SCN3A-210ENST00000640652 CELSR2Q9HCU4 2923 aa4.15□□□□□ -1.75
SCN3A-210ENST00000640652 RNF183Q96D59 192 aa4.15□□□□□ -1.75
SCN3A-210ENST00000640652 A0A0J9YXV3 536 aa4.15□□□□□ -1.75
SCN3A-210ENST00000640652 TSHBP01222 138 aa4.15□□□□□ -1.75
SCN3A-210ENST00000640652 TMEM263Q8WUH6 116 aaKnown RBP4.15□□□□□ -1.75
SCN3A-210ENST00000640652 FAM19A4Q96LR4 140 aa4.15□□□□□ -1.75
SCN3A-210ENST00000640652 CHCHD5Q9BSY4 110 aa4.15□□□□□ -1.75
SCN3A-210ENST00000640652 IGLV4-3A0A075B6K6 122 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 KNCNA6PVL3 124 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 MALP21145 153 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 MRPS36P82909 103 aaKnown RBP4.14□□□□□ -1.75
SCN3A-210ENST00000640652 TRBV30A0A0K0K1B3 111 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 SPRY2O43597 315 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 LINC01620Q4KN68 170 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 ZNRF2Q8NHG8 242 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 TRBV10-1A0A0K0K1A3 114 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 TRBV10-2A0A0K0K1G8 114 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms