RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 BAALCQ8WXS3 180 aa8.31□□□□□ -1.08
CLN6-225ENST00000638144 TM2D2Q9BX73 214 aa8.31□□□□□ -1.08
CLN6-225ENST00000638144 ELOBQ15370 118 aa8.3□□□□□ -1.08
CLN6-225ENST00000638144 COMMD7Q86VX2 200 aa8.3□□□□□ -1.08
CLN6-225ENST00000638144 LINC00269Q8N2A0 174 aa8.3□□□□□ -1.08
CLN6-225ENST00000638144 RYR1P21817 5038 aa8.29□□□□□ -1.08
CLN6-225ENST00000638144 IGLV4-60A0A075B6I1 120 aa8.29□□□□□ -1.08
CLN6-225ENST00000638144 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.29□□□□□ -1.08
CLN6-225ENST00000638144 IGKV2-29A2NJV5 120 aaPredicted RBP8.29□□□□□ -1.08
CLN6-225ENST00000638144 UBE2L6O14933 153 aa8.29□□□□□ -1.08
CLN6-225ENST00000638144 MRPL51Q4U2R6 128 aaKnown RBP8.29□□□□□ -1.08
CLN6-225ENST00000638144 FRZBQ92765 325 aa8.29□□□□□ -1.08
CLN6-225ENST00000638144 MRAP2Q96G30 205 aa8.29□□□□□ -1.08
CLN6-225ENST00000638144 ST20Q9HBF5 79 aa8.29□□□□□ -1.08
CLN6-225ENST00000638144 TMEM242Q9NWH2 141 aa8.29□□□□□ -1.08
CLN6-225ENST00000638144 A0A1B0GXF2 115 aa8.28□□□□□ -1.08
CLN6-225ENST00000638144 APCSP02743 223 aa8.28□□□□□ -1.08
CLN6-225ENST00000638144 PMCHP20382 165 aa8.28□□□□□ -1.08
CLN6-225ENST00000638144 PKIAP61925 76 aa8.28□□□□□ -1.08
CLN6-225ENST00000638144 HBBP68871 147 aa8.28□□□□□ -1.08
CLN6-225ENST00000638144 PNRC1Q12796 327 aaPredicted RBP8.28□□□□□ -1.08
CLN6-225ENST00000638144 FAM104BQ5XKR9 115 aa8.28□□□□□ -1.08
CLN6-225ENST00000638144 Q8N814 137 aa8.28□□□□□ -1.08
CLN6-225ENST00000638144 C20orf203Q8NBC4 194 aa8.28□□□□□ -1.08
CLN6-225ENST00000638144 RMI2Q96E14 147 aa8.28□□□□□ -1.08
CLN6-225ENST00000638144 TMEM70Q9BUB7 260 aa8.28□□□□□ -1.08
CLN6-225ENST00000638144 IGLV10-54A0A075B6I4 117 aa8.27□□□□□ -1.09
CLN6-225ENST00000638144 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.27□□□□□ -1.09
CLN6-225ENST00000638144 TRBV6-5A0A0K0K1A5 114 aa8.27□□□□□ -1.09
CLN6-225ENST00000638144 F8W036 122 aa8.27□□□□□ -1.09
CLN6-225ENST00000638144 I3L3M4 83 aa8.27□□□□□ -1.09
CLN6-225ENST00000638144 PPP1R2P9O14990 202 aa8.27□□□□□ -1.09
CLN6-225ENST00000638144 TSHBP01222 138 aa8.27□□□□□ -1.09
CLN6-225ENST00000638144 HLA-DQA1P01909 254 aa8.27□□□□□ -1.09
CLN6-225ENST00000638144 MT-ND4LP03901 98 aa8.27□□□□□ -1.09
CLN6-225ENST00000638144 KRTAP10-1P60331 282 aa8.27□□□□□ -1.09
CLN6-225ENST00000638144 NRACQ8N912 160 aa8.27□□□□□ -1.09
CLN6-225ENST00000638144 C1orf43Q9BWL3 253 aa8.27□□□□□ -1.09
CLN6-225ENST00000638144 APOBP04114 4563 aaKnown RBP8.27□□□□□ -1.09
CLN6-225ENST00000638144 HSPG2P98160 4391 aa8.26□□□□□ -1.09
CLN6-225ENST00000638144 IGLV5-52A0A0A0MRZ9 124 aa8.26□□□□□ -1.09
CLN6-225ENST00000638144 IGKV3OR2-268A0A0C4DH90 116 aa8.26□□□□□ -1.09
CLN6-225ENST00000638144 TMEM218A2RU14 115 aa8.26□□□□□ -1.09
CLN6-225ENST00000638144 Q0VG73 95 aa8.26□□□□□ -1.09
CLN6-225ENST00000638144 UQCC3Q6UW78 93 aa8.26□□□□□ -1.09
CLN6-225ENST00000638144 PGPEP1Q9NXJ5 209 aa8.26□□□□□ -1.09
CLN6-225ENST00000638144 D6R8Y8 96 aa8.25□□□□□ -1.09
CLN6-225ENST00000638144 POLR2KP53803 58 aaKnown RBP8.25□□□□□ -1.09
CLN6-225ENST00000638144 REG3AQ06141 175 aa8.25□□□□□ -1.09
CLN6-225ENST00000638144 MIAQ16674 131 aa8.25□□□□□ -1.09
CLN6-225ENST00000638144 CDPF1Q6NVV7 123 aa8.25□□□□□ -1.09
CLN6-225ENST00000638144 RNASEKQ6P5S7 137 aaKnown RBP8.25□□□□□ -1.09
CLN6-225ENST00000638144 ANAPC16Q96DE5 110 aa8.25□□□□□ -1.09
CLN6-225ENST00000638144 KRTAP17-1Q9BYP8 105 aa8.25□□□□□ -1.09
CLN6-225ENST00000638144 PRR34Q9NV39 138 aa8.25□□□□□ -1.09
CLN6-225ENST00000638144 COX11Q9Y6N1 276 aa8.25□□□□□ -1.09
CLN6-225ENST00000638144 A0A1B0GUV1 79 aa8.24□□□□□ -1.09
CLN6-225ENST00000638144 A0A1B0GW15 77 aa8.24□□□□□ -1.09
CLN6-225ENST00000638144 CKS2P33552 79 aa8.24□□□□□ -1.09
CLN6-225ENST00000638144 SUMO2P61956 95 aaKnown RBP8.24□□□□□ -1.09
CLN6-225ENST00000638144 HAMPP81172 84 aa8.24□□□□□ -1.09
CLN6-225ENST00000638144 LINC01620Q4KN68 170 aa8.24□□□□□ -1.09
CLN6-225ENST00000638144 AMMECR1LQ6DCA0 310 aa8.24□□□□□ -1.09
CLN6-225ENST00000638144 TRBV27A0A0K0K1C4 114 aa8.23□□□□□ -1.09
CLN6-225ENST00000638144 NPYP01303 97 aa8.23□□□□□ -1.09
CLN6-225ENST00000638144 S100A8P05109 93 aa8.23□□□□□ -1.09
CLN6-225ENST00000638144 FGF6P10767 208 aa8.23□□□□□ -1.09
CLN6-225ENST00000638144 KRTAP26-1Q6PEX3 210 aa8.23□□□□□ -1.09
CLN6-225ENST00000638144 LINC00862A6NCI5 91 aa8.22□□□□□ -1.09
CLN6-225ENST00000638144 USP17L23D6RBM5 183 aa8.22□□□□□ -1.09
CLN6-225ENST00000638144 CDK2AP2O75956 126 aa8.22□□□□□ -1.09
CLN6-225ENST00000638144 TNFRSF6BO95407 300 aa8.22□□□□□ -1.09
CLN6-225ENST00000638144 ESDP10768 282 aa8.22□□□□□ -1.09
CLN6-225ENST00000638144 GCSHP23434 173 aa8.22□□□□□ -1.09
CLN6-225ENST00000638144 FCER1GP30273 86 aa8.22□□□□□ -1.09
CLN6-225ENST00000638144 ATP5L2Q7Z4Y8 100 aa8.22□□□□□ -1.09
CLN6-225ENST00000638144 NTN5Q8WTR8 489 aaPredicted RBP8.21□□□□□ -1.1
CLN6-225ENST00000638144 SEC11CQ9BY50 192 aa8.21□□□□□ -1.1
CLN6-225ENST00000638144 C7orf77A4D0Y5 90 aa8.2□□□□□ -1.1
CLN6-225ENST00000638144 VCYO14598 125 aa8.2□□□□□ -1.1
CLN6-225ENST00000638144 PPP1R17O96001 155 aa8.2□□□□□ -1.1
CLN6-225ENST00000638144 KRTAP4-5Q9BYR2 181 aa8.2□□□□□ -1.1
CLN6-225ENST00000638144 TRBV24-1A0A075B6N3 115 aa8.19□□□□□ -1.1
CLN6-225ENST00000638144 RNASE13Q5GAN3 156 aaKnown RBP8.19□□□□□ -1.1
CLN6-225ENST00000638144 ORMDL3Q8N138 153 aa8.19□□□□□ -1.1
CLN6-225ENST00000638144 BTF3L4Q96K17 158 aa8.19□□□□□ -1.1
CLN6-225ENST00000638144 PRELID3AQ96N28 172 aa8.19□□□□□ -1.1
CLN6-225ENST00000638144 KIR2DL4Q99706 377 aa8.19□□□□□ -1.1
CLN6-225ENST00000638144 SMIM2Q9BVW6 85 aa8.19□□□□□ -1.1
CLN6-225ENST00000638144 GAGE12HA6NDE8 117 aa8.18□□□□□ -1.1
CLN6-225ENST00000638144 H7C423 109 aa8.18□□□□□ -1.1
CLN6-225ENST00000638144 TCAPO15273 167 aa8.18□□□□□ -1.1
CLN6-225ENST00000638144 PRSS1P07477 247 aa8.18□□□□□ -1.1
CLN6-225ENST00000638144 RPL39P62891 51 aaKnown RBP8.18□□□□□ -1.1
CLN6-225ENST00000638144 TMEM136Q6ZRR5 245 aa8.18□□□□□ -1.1
CLN6-225ENST00000638144 OR5A1Q8NGJ0 315 aa8.18□□□□□ -1.1
CLN6-225ENST00000638144 TMEM101Q96IK0 257 aa8.18□□□□□ -1.1
CLN6-225ENST00000638144 C20orf78Q9BR46 151 aa8.18□□□□□ -1.1
CLN6-225ENST00000638144 FAM30AQ9NZY2 134 aa8.18□□□□□ -1.1
CLN6-225ENST00000638144 TRAV8-4A0A0B4J246 113 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms