RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 TCRAP04437 139 aa-2.79□□□□□ -2.86
SCN1A-215ENST00000637285 RPL22P35268 128 aaKnown RBP-2.79□□□□□ -2.86
SCN1A-215ENST00000637285 MT1HP80294 61 aa-2.79□□□□□ -2.86
SCN1A-215ENST00000637285 TMEM170BQ5T4T1 132 aa-2.79□□□□□ -2.86
SCN1A-215ENST00000637285 OR13C6PQ8NH95 151 aa-2.79□□□□□ -2.86
SCN1A-215ENST00000637285 POLA1P09884 1462 aaPredicted RBP-2.79□□□□□ -2.86
SCN1A-215ENST00000637285 J3QLW9 94 aa-2.8□□□□□ -2.86
SCN1A-215ENST00000637285 COTL1Q14019 142 aa-2.8□□□□□ -2.86
SCN1A-215ENST00000637285 HRCT1Q6UXD1 115 aa-2.8□□□□□ -2.86
SCN1A-215ENST00000637285 FAM24BQ8N5W8 94 aa-2.8□□□□□ -2.86
SCN1A-215ENST00000637285 NAA60Q9H7X0 242 aa-2.8□□□□□ -2.86
SCN1A-215ENST00000637285 RPRMQ9NS64 109 aa-2.8□□□□□ -2.86
SCN1A-215ENST00000637285 NDUFA12Q9UI09 145 aa-2.8□□□□□ -2.86
SCN1A-215ENST00000637285 A2MP01023 1474 aa-2.8□□□□□ -2.86
SCN1A-215ENST00000637285 MRC1P22897 1456 aa-2.8□□□□□ -2.86
SCN1A-215ENST00000637285 SLIT1O75093 1534 aa-2.8□□□□□ -2.86
SCN1A-215ENST00000637285 MYH2Q9UKX2 1941 aa-2.8□□□□□ -2.86
SCN1A-215ENST00000637285 LRRK2Q5S007 2527 aa-2.81□□□□□ -2.86
SCN1A-215ENST00000637285 FER1L6Q2WGJ9 1857 aa-2.81□□□□□ -2.86
SCN1A-215ENST00000637285 LRRC37A3O60309 1634 aa-2.81□□□□□ -2.86
SCN1A-215ENST00000637285 ADAMTS12P58397 1594 aa-2.81□□□□□ -2.86
SCN1A-215ENST00000637285 UHRF1BP1LA0JNW5 1464 aa-2.81□□□□□ -2.86
SCN1A-215ENST00000637285 PIRTP0C851 137 aa-2.81□□□□□ -2.86
SCN1A-215ENST00000637285 PSPHP78330 225 aa-2.81□□□□□ -2.86
SCN1A-215ENST00000637285 R4GMQ9 66 aa-2.81□□□□□ -2.86
SCN1A-215ENST00000637285 COL4A6Q14031 1691 aa-2.82□□□□□ -2.86
SCN1A-215ENST00000637285 PTPN23Q9H3S7 1636 aa-2.82□□□□□ -2.86
SCN1A-215ENST00000637285 VSTM2AQ8TAG5 236 aa-2.82□□□□□ -2.86
SCN1A-215ENST00000637285 STOML2Q9UJZ1 356 aa-2.82□□□□□ -2.86
SCN1A-215ENST00000637285 MUC22E2RYF6 1773 aaPredicted RBP-2.82□□□□□ -2.86
SCN1A-215ENST00000637285 APOBP04114 4563 aaKnown RBP-2.83□□□□□ -2.86
SCN1A-215ENST00000637285 HMGXB3Q12766 1538 aa-2.83□□□□□ -2.86
SCN1A-215ENST00000637285 COX17Q14061 63 aa-2.83□□□□□ -2.86
SCN1A-215ENST00000637285 RPL7L1Q6DKI1 246 aaKnown RBP-2.83□□□□□ -2.86
SCN1A-215ENST00000637285 PPP1R14BQ96C90 147 aa-2.83□□□□□ -2.86
SCN1A-215ENST00000637285 KIAA0556O60303 1618 aa-2.83□□□□□ -2.86
SCN1A-215ENST00000637285 ZNF236Q9UL36 1845 aa-2.84□□□□□ -2.86
SCN1A-215ENST00000637285 PPP1R17O96001 155 aa-2.84□□□□□ -2.86
SCN1A-215ENST00000637285 IFNA1P01562 189 aa-2.84□□□□□ -2.86
SCN1A-215ENST00000637285 RBP4P02753 201 aa-2.84□□□□□ -2.86
SCN1A-215ENST00000637285 ATP11AUNQ6ZP68 121 aa-2.84□□□□□ -2.86
SCN1A-215ENST00000637285 DNAJC15Q9Y5T4 150 aa-2.84□□□□□ -2.86
SCN1A-215ENST00000637285 KDM5CP41229 1560 aa-2.84□□□□□ -2.86
SCN1A-215ENST00000637285 COL12A1Q99715 3063 aa-2.84□□□□□ -2.86
SCN1A-215ENST00000637285 A0A0C4DFX4 3053 aa-2.85□□□□□ -2.87
SCN1A-215ENST00000637285 CCDC168Q8NDH2 2452 aa-2.85□□□□□ -2.87
SCN1A-215ENST00000637285 TRBV7-4A0A0J9YYF1 115 aa-2.85□□□□□ -2.87
SCN1A-215ENST00000637285 IFNA17P01571 189 aa-2.85□□□□□ -2.87
SCN1A-215ENST00000637285 PIPP12273 146 aaPredicted RBP-2.85□□□□□ -2.87
SCN1A-215ENST00000637285 LINC01545Q5VT33 79 aa-2.85□□□□□ -2.87
SCN1A-215ENST00000637285 USMG5Q96IX5 58 aa-2.85□□□□□ -2.87
SCN1A-215ENST00000637285 TRAPPC2LQ9UL33 140 aa-2.85□□□□□ -2.87
SCN1A-215ENST00000637285 MED31Q9Y3C7 131 aa-2.85□□□□□ -2.87
SCN1A-215ENST00000637285 LINC00312Q9Y6C7 94 aa-2.85□□□□□ -2.87
SCN1A-215ENST00000637285 CMYA5Q8N3K9 4069 aa-2.86□□□□□ -2.87
SCN1A-215ENST00000637285 A6NIN4 97 aa-2.86□□□□□ -2.87
SCN1A-215ENST00000637285 HSD11B1P28845 292 aa-2.86□□□□□ -2.87
SCN1A-215ENST00000637285 MTORP42345 2549 aa-2.86□□□□□ -2.87
SCN1A-215ENST00000637285 ADCY9O60503 1353 aa-2.87□□□□□ -2.87
SCN1A-215ENST00000637285 RPL7P18124 248 aaKnown RBP-2.87□□□□□ -2.87
SCN1A-215ENST00000637285 ZNF818PQ6ZRF7 136 aa-2.87□□□□□ -2.87
SCN1A-215ENST00000637285 SMIM20Q8N5G0 67 aa-2.87□□□□□ -2.87
SCN1A-215ENST00000637285 CAMSAP1Q5T5Y3 1602 aa-2.87□□□□□ -2.87
SCN1A-215ENST00000637285 CELSR3Q9NYQ7 3312 aa-2.87□□□□□ -2.87
SCN1A-215ENST00000637285 UTP20O75691 2785 aaKnown RBP-2.88□□□□□ -2.87
SCN1A-215ENST00000637285 CDKN2CP42773 168 aa-2.88□□□□□ -2.87
SCN1A-215ENST00000637285 UBE2G1P62253 170 aa-2.88□□□□□ -2.87
SCN1A-215ENST00000637285 GNG3P63215 75 aa-2.88□□□□□ -2.87
SCN1A-215ENST00000637285 CLLU1Q5K131 121 aa-2.88□□□□□ -2.87
SCN1A-215ENST00000637285 SPANXN1Q5VSR9 72 aa-2.88□□□□□ -2.87
SCN1A-215ENST00000637285 DHRS4L2Q6PKH6 230 aa-2.88□□□□□ -2.87
SCN1A-215ENST00000637285 DNAH1Q9P2D7 4330 aa-2.88□□□□□ -2.87
SCN1A-215ENST00000637285 PRDM2Q13029 1718 aa-2.88□□□□□ -2.87
SCN1A-215ENST00000637285 TULP4Q9NRJ4 1543 aa-2.88□□□□□ -2.87
SCN1A-215ENST00000637285 ARHGEF12Q9NZN5 1544 aa-2.88□□□□□ -2.87
SCN1A-215ENST00000637285 NBEAQ8NFP9 2946 aa-2.89□□□□□ -2.87
SCN1A-215ENST00000637285 E7EQ34 232 aa-2.89□□□□□ -2.87
SCN1A-215ENST00000637285 F8VRH5 84 aa-2.89□□□□□ -2.87
SCN1A-215ENST00000637285 M0QX08 132 aa-2.89□□□□□ -2.87
SCN1A-215ENST00000637285 MYOM3Q5VTT5 1437 aa-2.89□□□□□ -2.87
SCN1A-215ENST00000637285 SPTSSBQ8NFR3 76 aa-2.89□□□□□ -2.87
SCN1A-215ENST00000637285 CEP19Q96LK0 163 aa-2.89□□□□□ -2.87
SCN1A-215ENST00000637285 CCDC32Q9BV29 185 aa-2.89□□□□□ -2.87
SCN1A-215ENST00000637285 FMN2Q9NZ56 1722 aa-2.89□□□□□ -2.87
SCN1A-215ENST00000637285 PLB1Q6P1J6 1458 aa-2.9□□□□□ -2.87
SCN1A-215ENST00000637285 LINC00959A0A1B0GUT2 108 aa-2.9□□□□□ -2.87
SCN1A-215ENST00000637285 ARPC5O15511 151 aa-2.9□□□□□ -2.87
SCN1A-215ENST00000637285 YPEL1O60688 119 aa-2.9□□□□□ -2.87
SCN1A-215ENST00000637285 TMED4Q7Z7H5 227 aa-2.9□□□□□ -2.87
SCN1A-215ENST00000637285 SBF2Q86WG5 1849 aa-2.91□□□□□ -2.87
SCN1A-215ENST00000637285 TCTAP57738 103 aa-2.91□□□□□ -2.88
SCN1A-215ENST00000637285 PTRHD1Q6GMV3 140 aaKnown RBP-2.91□□□□□ -2.88
SCN1A-215ENST00000637285 DCUN1D2Q6PH85 259 aa-2.91□□□□□ -2.88
SCN1A-215ENST00000637285 AMELXQ99217 191 aa-2.91□□□□□ -2.88
SCN1A-215ENST00000637285 V9GYH0 126 aa-2.91□□□□□ -2.88
SCN1A-215ENST00000637285 PAPPA2Q9BXP8 1791 aa-2.92□□□□□ -2.88
SCN1A-215ENST00000637285 FAM107AO95990 144 aa-2.92□□□□□ -2.88
SCN1A-215ENST00000637285 HLA-DRB4P13762 266 aa-2.92□□□□□ -2.88
SCN1A-215ENST00000637285 UBE2D3P61077 147 aa-2.92□□□□□ -2.88
SCN1A-215ENST00000637285 UBE2D2P62837 147 aa-2.92□□□□□ -2.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms