RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 FAM19A5Q7Z5A7 132 aaPredicted RBP5.69□□□□□ -1.5
SCN8A-212ENST00000636945 RNF152Q8N8N0 203 aa5.69□□□□□ -1.5
SCN8A-212ENST00000636945 NDUFA12Q9UI09 145 aa5.69□□□□□ -1.5
SCN8A-212ENST00000636945 IGHV3-64A0A075B6Q5 118 aa5.69□□□□□ -1.5
SCN8A-212ENST00000636945 COX7A2LO14548 114 aa5.69□□□□□ -1.5
SCN8A-212ENST00000636945 ECSCRQ19T08 205 aa5.69□□□□□ -1.5
SCN8A-212ENST00000636945 UNQ9165/PRO28630Q6UXU0 137 aa5.69□□□□□ -1.5
SCN8A-212ENST00000636945 IGLV5-45A0A087WSX0 123 aa5.68□□□□□ -1.5
SCN8A-212ENST00000636945 ATP5J2P56134 94 aa5.68□□□□□ -1.5
SCN8A-212ENST00000636945 LINC00527Q9UJ94 153 aa5.68□□□□□ -1.5
SCN8A-212ENST00000636945 BSNQ9UPA5 3926 aa5.68□□□□□ -1.5
SCN8A-212ENST00000636945 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.68□□□□□ -1.5
SCN8A-212ENST00000636945 F6UB75 175 aa5.68□□□□□ -1.5
SCN8A-212ENST00000636945 TRACP01848 142 aa5.68□□□□□ -1.5
SCN8A-212ENST00000636945 SPXQ9BT56 116 aa5.68□□□□□ -1.5
SCN8A-212ENST00000636945 IGHV3OR16-10A0A075B7F0 116 aa5.68□□□□□ -1.5
SCN8A-212ENST00000636945 TRAV8-3A0A0A6YYJ7 113 aa5.68□□□□□ -1.5
SCN8A-212ENST00000636945 GNLYP22749 145 aa5.68□□□□□ -1.5
SCN8A-212ENST00000636945 DEFB104AQ8WTQ1 72 aa5.68□□□□□ -1.5
SCN8A-212ENST00000636945 LAMA5O15230 3695 aa5.68□□□□□ -1.5
SCN8A-212ENST00000636945 CFAP46Q8IYW2 2715 aa5.68□□□□□ -1.5
SCN8A-212ENST00000636945 ADARB2-AS1A8MUL3 147 aa5.67□□□□□ -1.5
SCN8A-212ENST00000636945 C5orf56Q8N8D9 126 aa5.67□□□□□ -1.5
SCN8A-212ENST00000636945 UPK3BQ9BT76 320 aa5.67□□□□□ -1.5
SCN8A-212ENST00000636945 TACC2O95359 2948 aa5.67□□□□□ -1.5
SCN8A-212ENST00000636945 NDUFA1O15239 70 aa5.67□□□□□ -1.5
SCN8A-212ENST00000636945 IGHG2P01859 326 aa5.67□□□□□ -1.5
SCN8A-212ENST00000636945 RPL11P62913 178 aaKnown RBP5.67□□□□□ -1.5
SCN8A-212ENST00000636945 KLK5Q9Y337 293 aaPredicted RBP5.66□□□□□ -1.5
SCN8A-212ENST00000636945 ATMQ13315 3056 aa5.66□□□□□ -1.5
SCN8A-212ENST00000636945 CYSTM1Q9H1C7 97 aa5.66□□□□□ -1.5
SCN8A-212ENST00000636945 ADGRG4Q8IZF6 3080 aa5.66□□□□□ -1.5
SCN8A-212ENST00000636945 PRSS2P07478 247 aa5.66□□□□□ -1.5
SCN8A-212ENST00000636945 DAZ2Q13117 558 aaKnown RBP5.66□□□□□ -1.5
SCN8A-212ENST00000636945 C11orf71Q6IPW1 123 aa5.66□□□□□ -1.5
SCN8A-212ENST00000636945 DAZ4Q86SG3 579 aaKnown RBP5.66□□□□□ -1.5
SCN8A-212ENST00000636945 OBSCN-AS1Q96MR7 158 aa5.66□□□□□ -1.5
SCN8A-212ENST00000636945 DAZ1Q9NQZ3 744 aaKnown RBP5.66□□□□□ -1.5
SCN8A-212ENST00000636945 DAZ3Q9NR90 486 aaKnown RBP5.66□□□□□ -1.5
SCN8A-212ENST00000636945 BOD1L1Q8NFC6 3051 aa5.66□□□□□ -1.5
SCN8A-212ENST00000636945 DCHS2Q6V1P9 2916 aa5.65□□□□□ -1.5
SCN8A-212ENST00000636945 F5H697 171 aa5.65□□□□□ -1.5
SCN8A-212ENST00000636945 ATOX1O00244 68 aa5.65□□□□□ -1.5
SCN8A-212ENST00000636945 ZFP36P26651 326 aaKnown RBP5.65□□□□□ -1.5
SCN8A-212ENST00000636945 IGLV5-39A0A0G2JS06 123 aa5.65□□□□□ -1.51
SCN8A-212ENST00000636945 TRBV12-3P01733 135 aa5.65□□□□□ -1.51
SCN8A-212ENST00000636945 FAM19A3Q7Z5A8 133 aa5.65□□□□□ -1.51
SCN8A-212ENST00000636945 HELZ2Q9BYK8 2649 aaKnown RBP5.65□□□□□ -1.51
SCN8A-212ENST00000636945 TRAV25A0A0B4J276 109 aa5.65□□□□□ -1.51
SCN8A-212ENST00000636945 TIRAPP58753 221 aa5.65□□□□□ -1.51
SCN8A-212ENST00000636945 LINC00308Q8TCZ7 52 aa5.65□□□□□ -1.51
SCN8A-212ENST00000636945 CHCHD7Q9BUK0 85 aa5.65□□□□□ -1.51
SCN8A-212ENST00000636945 UBE2D4Q9Y2X8 147 aa5.65□□□□□ -1.51
SCN8A-212ENST00000636945 DPH3Q96FX2 82 aa5.64□□□□□ -1.51
SCN8A-212ENST00000636945 DUX5Q96PT3 197 aa5.64□□□□□ -1.51
SCN8A-212ENST00000636945 TRAV41A0A0B4J266 112 aa5.64□□□□□ -1.51
SCN8A-212ENST00000636945 A8MZ25 164 aa5.64□□□□□ -1.51
SCN8A-212ENST00000636945 H3BUA1 57 aa5.64□□□□□ -1.51
SCN8A-212ENST00000636945 CD28P10747 220 aa5.64□□□□□ -1.51
SCN8A-212ENST00000636945 TMEM258P61165 79 aa5.64□□□□□ -1.51
SCN8A-212ENST00000636945 POLEQ07864 2286 aa5.64□□□□□ -1.51
SCN8A-212ENST00000636945 ZNF415Q09FC8 603 aa5.64□□□□□ -1.51
SCN8A-212ENST00000636945 FBXL19-AS1Q494R0 122 aa5.64□□□□□ -1.51
SCN8A-212ENST00000636945 MYO18BQ8IUG5 2567 aa5.64□□□□□ -1.51
SCN8A-212ENST00000636945 Q8N2B8 174 aa5.64□□□□□ -1.51
SCN8A-212ENST00000636945 GAGE2AQ6NT46 116 aa5.63□□□□□ -1.51
SCN8A-212ENST00000636945 PRRC2AP48634 2157 aaKnown RBP5.63□□□□□ -1.51
SCN8A-212ENST00000636945 OXTP01178 125 aa5.63□□□□□ -1.51
SCN8A-212ENST00000636945 SOSTDC1Q6X4U4 206 aa5.63□□□□□ -1.51
SCN8A-212ENST00000636945 LY6HO94772 140 aa5.63□□□□□ -1.51
SCN8A-212ENST00000636945 RPL18AQ02543 176 aaKnown RBP5.63□□□□□ -1.51
SCN8A-212ENST00000636945 FAM74A4Q5TZK3 123 aa5.63□□□□□ -1.51
SCN8A-212ENST00000636945 FAM218AQ96MZ4 157 aa5.63□□□□□ -1.51
SCN8A-212ENST00000636945 TRAV12-3A0A0B4J271 114 aa5.62□□□□□ -1.51
SCN8A-212ENST00000636945 K7EMT4 169 aa5.62□□□□□ -1.51
SCN8A-212ENST00000636945 INAFM2P0DMQ5 153 aa5.62□□□□□ -1.51
SCN8A-212ENST00000636945 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.62□□□□□ -1.51
SCN8A-212ENST00000636945 OR13C6PQ8NH95 151 aa5.62□□□□□ -1.51
SCN8A-212ENST00000636945 CCL21O00585 134 aa5.62□□□□□ -1.51
SCN8A-212ENST00000636945 SAA4P35542 130 aa5.62□□□□□ -1.51
SCN8A-212ENST00000636945 USMG5Q96IX5 58 aa5.62□□□□□ -1.51
SCN8A-212ENST00000636945 RHPN1-AS1Q9BWJ2 59 aa5.62□□□□□ -1.51
SCN8A-212ENST00000636945 BAALC-AS2P0C853 105 aa5.62□□□□□ -1.51
SCN8A-212ENST00000636945 PIK3CD-AS1Q5SR53 167 aa5.62□□□□□ -1.51
SCN8A-212ENST00000636945 Q5XG85 94 aa5.62□□□□□ -1.51
SCN8A-212ENST00000636945 Q6JHZ5 121 aa5.62□□□□□ -1.51
SCN8A-212ENST00000636945 IGHV1OR15-1A0A075B7D0 117 aa5.61□□□□□ -1.51
SCN8A-212ENST00000636945 PKDREJQ9NTG1 2253 aa5.61□□□□□ -1.51
SCN8A-212ENST00000636945 BAHCC1Q9P281 2608 aa5.61□□□□□ -1.51
SCN8A-212ENST00000636945 hADV29S1A0JD25 119 aa5.61□□□□□ -1.51
SCN8A-212ENST00000636945 NPC2P61916 151 aa5.61□□□□□ -1.51
SCN8A-212ENST00000636945 ZNF625Q96I27 306 aaPredicted RBP5.61□□□□□ -1.51
SCN8A-212ENST00000636945 EPM2AB3EWF7 344 aa5.61□□□□□ -1.51
SCN8A-212ENST00000636945 SERP2Q8N6R1 65 aa5.61□□□□□ -1.51
SCN8A-212ENST00000636945 CDKN2A-AS1Q9UH64 79 aa5.61□□□□□ -1.51
SCN8A-212ENST00000636945 MOB4Q9Y3A3 225 aa5.61□□□□□ -1.51
SCN8A-212ENST00000636945 PF4V1P10720 104 aa5.6□□□□□ -1.51
SCN8A-212ENST00000636945 RPL28P46779 137 aaKnown RBP5.6□□□□□ -1.51
SCN8A-212ENST00000636945 COPS9Q8WXC6 57 aa5.6□□□□□ -1.51
SCN8A-212ENST00000636945 ROS1P08922 2347 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms