RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 KRTAP10-9P60411 292 aa10.3□□□□□ -0.76
CACNA1A-228ENST00000636610 SLC25A29Q8N8R3 303 aa10.3□□□□□ -0.76
CACNA1A-228ENST00000636610 AMELXQ99217 191 aa10.3□□□□□ -0.76
CACNA1A-228ENST00000636610 NBEAL2Q6ZNJ1 2754 aa10.3□□□□□ -0.76
CACNA1A-228ENST00000636610 FOXI1Q12951 378 aa10.3□□□□□ -0.76
CACNA1A-228ENST00000636610 POM121L12Q8N7R1 296 aa10.3□□□□□ -0.76
CACNA1A-228ENST00000636610 EIF4EBP3O60516 100 aaPredicted RBP10.29□□□□□ -0.76
CACNA1A-228ENST00000636610 ELANEP08246 267 aa10.29□□□□□ -0.76
CACNA1A-228ENST00000636610 SETXQ7Z333 2677 aaKnown RBP10.29□□□□□ -0.76
CACNA1A-228ENST00000636610 TRBV7-9A0A0J9YWB2 115 aa10.29□□□□□ -0.76
CACNA1A-228ENST00000636610 RHODO00212 210 aa10.29□□□□□ -0.76
CACNA1A-228ENST00000636610 PAPPA-AS1Q5QFB9 102 aa10.29□□□□□ -0.76
CACNA1A-228ENST00000636610 TMEM61Q8N0U2 210 aa10.29□□□□□ -0.76
CACNA1A-228ENST00000636610 C10orf126Q8N4M7 172 aa10.29□□□□□ -0.76
CACNA1A-228ENST00000636610 LINC01356Q8N9X3 169 aa10.29□□□□□ -0.76
CACNA1A-228ENST00000636610 APCP25054 2843 aa10.29□□□□□ -0.76
CACNA1A-228ENST00000636610 SPINK8P0C7L1 97 aa10.28□□□□□ -0.76
CACNA1A-228ENST00000636610 FHL3Q13643 280 aa10.28□□□□□ -0.76
CACNA1A-228ENST00000636610 UBE2E2Q96LR5 201 aa10.28□□□□□ -0.76
CACNA1A-228ENST00000636610 PRO1854Q9UHT4 67 aa10.28□□□□□ -0.76
CACNA1A-228ENST00000636610 TNFRSF18Q9Y5U5 241 aa10.28□□□□□ -0.76
CACNA1A-228ENST00000636610 RBMY1BA6NDE4 496 aaKnown RBP10.28□□□□□ -0.76
CACNA1A-228ENST00000636610 RBMY1EA6NEQ0 496 aaKnown RBP10.28□□□□□ -0.76
CACNA1A-228ENST00000636610 RBMY1DP0C7P1 496 aaKnown RBP10.28□□□□□ -0.76
CACNA1A-228ENST00000636610 TMEM223A0PJW6 202 aa10.28□□□□□ -0.76
CACNA1A-228ENST00000636610 C9JAW5 83 aa10.28□□□□□ -0.76
CACNA1A-228ENST00000636610 ZNF625Q96I27 306 aaPredicted RBP10.28□□□□□ -0.76
CACNA1A-228ENST00000636610 LINC01587Q99440 93 aa10.28□□□□□ -0.76
CACNA1A-228ENST00000636610 XCL2Q9UBD3 114 aa10.28□□□□□ -0.76
CACNA1A-228ENST00000636610 IGHV3-53P01767 116 aa10.27□□□□□ -0.77
CACNA1A-228ENST00000636610 BRI3O95415 125 aa10.27□□□□□ -0.77
CACNA1A-228ENST00000636610 C1QTNF4Q9BXJ3 329 aa10.27□□□□□ -0.77
CACNA1A-228ENST00000636610 VPREB3Q9UKI3 123 aa10.26□□□□□ -0.77
CACNA1A-228ENST00000636610 HIVEP2P31629 2446 aa10.26□□□□□ -0.77
CACNA1A-228ENST00000636610 TRBV6-5A0A0K0K1A5 114 aa10.26□□□□□ -0.77
CACNA1A-228ENST00000636610 LINC01619G3V211 115 aa10.26□□□□□ -0.77
CACNA1A-228ENST00000636610 MT-ATP8P03928 68 aa10.26□□□□□ -0.77
CACNA1A-228ENST00000636610 IGHV3-30-3P0DP02 117 aa10.26□□□□□ -0.77
CACNA1A-228ENST00000636610 CARD19Q96LW7 228 aa10.26□□□□□ -0.77
CACNA1A-228ENST00000636610 ZNF702PQ9H963 129 aa10.26□□□□□ -0.77
CACNA1A-228ENST00000636610 UBE2D3P61077 147 aa10.25□□□□□ -0.77
CACNA1A-228ENST00000636610 UBE2D2P62837 147 aa10.25□□□□□ -0.77
CACNA1A-228ENST00000636610 TIMM21Q9BVV7 248 aa10.25□□□□□ -0.77
CACNA1A-228ENST00000636610 ADAMTSL4-AS1Q5T5F5 129 aa10.25□□□□□ -0.77
CACNA1A-228ENST00000636610 ANKRD29Q8N6D5 301 aa10.25□□□□□ -0.77
CACNA1A-228ENST00000636610 NDUFA7O95182 113 aa10.24□□□□□ -0.77
CACNA1A-228ENST00000636610 NSUN5P1Q3KNT7 163 aa10.24□□□□□ -0.77
CACNA1A-228ENST00000636610 TRGV11A0A075B6L2 103 aa10.24□□□□□ -0.77
CACNA1A-228ENST00000636610 LEPROTO15243 131 aa10.24□□□□□ -0.77
CACNA1A-228ENST00000636610 RPL32P62910 135 aaKnown RBP10.24□□□□□ -0.77
CACNA1A-228ENST00000636610 ERG28Q9UKR5 140 aa10.24□□□□□ -0.77
CACNA1A-228ENST00000636610 GCN1Q92616 2671 aaKnown RBP10.24□□□□□ -0.77
CACNA1A-228ENST00000636610 A0A0J9YXY3 114 aa10.23□□□□□ -0.77
CACNA1A-228ENST00000636610 H3BMM0 161 aa10.23□□□□□ -0.77
CACNA1A-228ENST00000636610 Q6ZUT4 128 aa10.23□□□□□ -0.77
CACNA1A-228ENST00000636610 DYNLRB2Q8TF09 96 aa10.23□□□□□ -0.77
CACNA1A-228ENST00000636610 A8MWV9 139 aa10.23□□□□□ -0.77
CACNA1A-228ENST00000636610 RHOHQ15669 191 aa10.23□□□□□ -0.77
CACNA1A-228ENST00000636610 FAM104AQ969W3 186 aa10.23□□□□□ -0.77
CACNA1A-228ENST00000636610 CLUHP3Q96NS8 147 aa10.23□□□□□ -0.77
CACNA1A-228ENST00000636610 LINC00467Q9BRT7 94 aa10.23□□□□□ -0.77
CACNA1A-228ENST00000636610 SPATA25Q9BR10 227 aa10.22□□□□□ -0.77
CACNA1A-228ENST00000636610 CDIP1Q9H305 208 aa10.22□□□□□ -0.77
CACNA1A-228ENST00000636610 IGHV3-33P01772 117 aa10.22□□□□□ -0.77
CACNA1A-228ENST00000636610 XGP55808 180 aa10.22□□□□□ -0.77
CACNA1A-228ENST00000636610 NDUFA12Q9UI09 145 aa10.22□□□□□ -0.77
CACNA1A-228ENST00000636610 SLC25A20O43772 301 aa10.21□□□□□ -0.78
CACNA1A-228ENST00000636610 DGAT2L7PQ6IED9 249 aa10.2□□□□□ -0.78
CACNA1A-228ENST00000636610 TEN1Q86WV5 123 aa10.2□□□□□ -0.78
CACNA1A-228ENST00000636610 TMEM263Q8WUH6 116 aaKnown RBP10.2□□□□□ -0.78
CACNA1A-228ENST00000636610 GEMIN7Q9H840 131 aaKnown RBP10.2□□□□□ -0.78
CACNA1A-228ENST00000636610 ITPR2Q14571 2701 aa10.2□□□□□ -0.78
CACNA1A-228ENST00000636610 CDKN2A-AS1Q9UH64 79 aa10.19□□□□□ -0.78
CACNA1A-228ENST00000636610 TRGV1A0A0A0MS02 117 aa10.19□□□□□ -0.78
CACNA1A-228ENST00000636610 M0R2P5 195 aa10.19□□□□□ -0.78
CACNA1A-228ENST00000636610 Q6YL49 198 aa10.19□□□□□ -0.78
CACNA1A-228ENST00000636610 ODF3Q96PU9 254 aa10.19□□□□□ -0.78
CACNA1A-228ENST00000636610 TRAV13-1A0A0B4J241 112 aa10.18□□□□□ -0.78
CACNA1A-228ENST00000636610 GATA3P23771 443 aa10.18□□□□□ -0.78
CACNA1A-228ENST00000636610 CKS1BP61024 79 aa10.18□□□□□ -0.78
CACNA1A-228ENST00000636610 LYRM7Q5U5X0 104 aa10.18□□□□□ -0.78
CACNA1A-228ENST00000636610 HIST2H2BCQ6DN03 193 aa10.18□□□□□ -0.78
CACNA1A-228ENST00000636610 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.18□□□□□ -0.78
CACNA1A-228ENST00000636610 NTN5Q8WTR8 489 aaPredicted RBP10.18□□□□□ -0.78
CACNA1A-228ENST00000636610 CLEC2BQ92478 149 aa10.18□□□□□ -0.78
CACNA1A-228ENST00000636610 MAP6D1Q9H9H5 199 aa10.18□□□□□ -0.78
CACNA1A-228ENST00000636610 IGKV3OR2-268A0A0C4DH90 116 aa10.18□□□□□ -0.78
CACNA1A-228ENST00000636610 IGHV4-31P0DP07 118 aa10.18□□□□□ -0.78
CACNA1A-228ENST00000636610 PPDPFLQ8WWR9 84 aa10.18□□□□□ -0.78
CACNA1A-228ENST00000636610 A0A096LNT2 108 aa10.17□□□□□ -0.78
CACNA1A-228ENST00000636610 TEX49A0A1B0GTD5 131 aa10.17□□□□□ -0.78
CACNA1A-228ENST00000636610 TRIAP1O43715 76 aa10.17□□□□□ -0.78
CACNA1A-228ENST00000636610 Q96MF0 132 aa10.17□□□□□ -0.78
CACNA1A-228ENST00000636610 BBC3Q96PG8 261 aaPredicted RBP10.17□□□□□ -0.78
CACNA1A-228ENST00000636610 CHCHD7Q9BUK0 85 aa10.17□□□□□ -0.78
CACNA1A-228ENST00000636610 CIDEAO60543 219 aa10.17□□□□□ -0.78
CACNA1A-228ENST00000636610 PLA2G2AP14555 144 aa10.17□□□□□ -0.78
CACNA1A-228ENST00000636610 COX6A2Q02221 97 aa10.17□□□□□ -0.78
CACNA1A-228ENST00000636610 ZNF415Q09FC8 603 aa10.16□□□□□ -0.78
CACNA1A-228ENST00000636610 WFDC10AQ9H1F0 79 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms