RNA–Protein interactions for RNA: ENST00000635893.1

SCN1A-211, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 168 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-211ENST00000635893 PAPPA2Q9BXP8 1791 aa-2.03□□□□□ -2.73
SCN1A-211ENST00000635893 TRDV1A0A1B0GX56 115 aa-2.04□□□□□ -2.74
SCN1A-211ENST00000635893 FAM92AA1XBS5 289 aa-2.04□□□□□ -2.74
SCN1A-211ENST00000635893 ZNF609O15014 1411 aa-2.04□□□□□ -2.74
SCN1A-211ENST00000635893 ARHGEF5Q12774 1597 aa-2.04□□□□□ -2.74
SCN1A-211ENST00000635893 GAPVD1Q14C86 1478 aa-2.04□□□□□ -2.74
SCN1A-211ENST00000635893 CYP2G1PQ6ZSU1 146 aa-2.04□□□□□ -2.74
SCN1A-211ENST00000635893 LINC00305Q7Z4B0 112 aa-2.04□□□□□ -2.74
SCN1A-211ENST00000635893 SCN3BQ9NY72 215 aa-2.04□□□□□ -2.74
SCN1A-211ENST00000635893 ANKRD31Q8N7Z5 1873 aa-2.05□□□□□ -2.74
SCN1A-211ENST00000635893 ARAP1Q96P48 1450 aa-2.05□□□□□ -2.74
SCN1A-211ENST00000635893 TECPR2O15040 1411 aa-2.05□□□□□ -2.74
SCN1A-211ENST00000635893 A0A087WVE0 104 aa-2.05□□□□□ -2.74
SCN1A-211ENST00000635893 A0A1B0GW64 132 aa-2.05□□□□□ -2.74
SCN1A-211ENST00000635893 YPEL1O60688 119 aa-2.05□□□□□ -2.74
SCN1A-211ENST00000635893 CRYBA4P53673 196 aa-2.05□□□□□ -2.74
SCN1A-211ENST00000635893 SSBP1Q04837 148 aaKnown RBP-2.05□□□□□ -2.74
SCN1A-211ENST00000635893 SELENOSQ9BQE4 189 aa-2.05□□□□□ -2.74
SCN1A-211ENST00000635893 MED11Q9P086 117 aa-2.05□□□□□ -2.74
SCN1A-211ENST00000635893 NUBP2Q9Y5Y2 271 aa-2.05□□□□□ -2.74
SCN1A-211ENST00000635893 V9GYV3 84 aa-2.05□□□□□ -2.74
SCN1A-211ENST00000635893 TRAV13-1A0A0B4J241 112 aa-2.06□□□□□ -2.74
SCN1A-211ENST00000635893 SYS1-DBNDD2H3BUS1 97 aa-2.06□□□□□ -2.74
SCN1A-211ENST00000635893 CRYGSP22914 178 aa-2.06□□□□□ -2.74
SCN1A-211ENST00000635893 COX7B2Q8TF08 81 aa-2.06□□□□□ -2.74
SCN1A-211ENST00000635893 PPDPFLQ8WWR9 84 aa-2.06□□□□□ -2.74
SCN1A-211ENST00000635893 NAA60Q9H7X0 242 aa-2.06□□□□□ -2.74
SCN1A-211ENST00000635893 ZCCHC11Q5TAX3 1644 aaKnown RBP-2.06□□□□□ -2.74
SCN1A-211ENST00000635893 CICQ96RK0 1608 aaPredicted RBP-2.06□□□□□ -2.74
SCN1A-211ENST00000635893 PATJQ8NI35 1801 aa-2.07□□□□□ -2.74
SCN1A-211ENST00000635893 CPSF4LA6NMK7 179 aaKnown RBP-2.07□□□□□ -2.74
SCN1A-211ENST00000635893 H3BMG7 143 aa-2.07□□□□□ -2.74
SCN1A-211ENST00000635893 DEGS1O15121 323 aa-2.07□□□□□ -2.74
SCN1A-211ENST00000635893 UBE2D3P61077 147 aa-2.07□□□□□ -2.74
SCN1A-211ENST00000635893 UBE2D2P62837 147 aa-2.07□□□□□ -2.74
SCN1A-211ENST00000635893 KRTAP8-1Q8IUC2 63 aa-2.07□□□□□ -2.74
SCN1A-211ENST00000635893 C20orf197Q8N268 126 aa-2.07□□□□□ -2.74
SCN1A-211ENST00000635893 IFI27L1Q96BM0 104 aa-2.07□□□□□ -2.74
SCN1A-211ENST00000635893 CFAP53Q96M91 514 aa-2.07□□□□□ -2.74
SCN1A-211ENST00000635893 VPS25Q9BRG1 176 aa-2.07□□□□□ -2.74
SCN1A-211ENST00000635893 SCP2D1Q9UJQ7 156 aa-2.07□□□□□ -2.74
SCN1A-211ENST00000635893 ADGBQ8N7X0 1667 aa-2.07□□□□□ -2.74
SCN1A-211ENST00000635893 KIAA0556O60303 1618 aa-2.07□□□□□ -2.74
SCN1A-211ENST00000635893 HMGXB3Q12766 1538 aa-2.07□□□□□ -2.74
SCN1A-211ENST00000635893 NRXN2Q9P2S2 1712 aa-2.08□□□□□ -2.74
SCN1A-211ENST00000635893 IFT172Q9UG01 1749 aa-2.08□□□□□ -2.74
SCN1A-211ENST00000635893 PPP5D1E7EU14 171 aa-2.08□□□□□ -2.74
SCN1A-211ENST00000635893 NIPSNAP2O75323 286 aa-2.08□□□□□ -2.74
SCN1A-211ENST00000635893 MT1FP04733 61 aa-2.08□□□□□ -2.74
SCN1A-211ENST00000635893 COX8AP10176 69 aa-2.08□□□□□ -2.74
SCN1A-211ENST00000635893 NPC2P61916 151 aa-2.08□□□□□ -2.74
SCN1A-211ENST00000635893 OR8B8Q15620 311 aa-2.08□□□□□ -2.74
SCN1A-211ENST00000635893 CLPSL2Q6UWE3 100 aa-2.08□□□□□ -2.74
SCN1A-211ENST00000635893 GINS3Q9BRX5 216 aa-2.08□□□□□ -2.74
SCN1A-211ENST00000635893 LAMTOR3Q9UHA4 124 aa-2.08□□□□□ -2.74
SCN1A-211ENST00000635893 KIF13AQ9H1H9 1805 aa-2.09□□□□□ -2.74
SCN1A-211ENST00000635893 MAP1LC3B2A6NCE7 125 aa-2.09□□□□□ -2.74
SCN1A-211ENST00000635893 HBDP02042 147 aa-2.09□□□□□ -2.74
SCN1A-211ENST00000635893 S100A11P31949 105 aa-2.09□□□□□ -2.74
SCN1A-211ENST00000635893 SNX29P2Q8IUI4 249 aa-2.09□□□□□ -2.74
SCN1A-211ENST00000635893 NPVFQ9HCQ7 196 aa-2.09□□□□□ -2.74
SCN1A-211ENST00000635893 ZMYM4Q5VZL5 1548 aa-2.09□□□□□ -2.74
SCN1A-211ENST00000635893 CDC42BPAQ5VT25 1732 aa-2.09□□□□□ -2.74
SCN1A-211ENST00000635893 PHIPQ8WWQ0 1821 aa-2.1□□□□□ -2.74
SCN1A-211ENST00000635893 WDFY3Q8IZQ1 3526 aa-2.1□□□□□ -2.75
SCN1A-211ENST00000635893 TRAV1-2A0A0B4J238 106 aa-2.1□□□□□ -2.75
SCN1A-211ENST00000635893 SLC25A6P12236 298 aa-2.1□□□□□ -2.75
SCN1A-211ENST00000635893 ASIPP42127 132 aa-2.1□□□□□ -2.75
SCN1A-211ENST00000635893 RGS21Q2M5E4 152 aa-2.1□□□□□ -2.75
SCN1A-211ENST00000635893 WFDC9Q8NEX5 89 aa-2.1□□□□□ -2.75
SCN1A-211ENST00000635893 OR13C6PQ8NH95 151 aa-2.1□□□□□ -2.75
SCN1A-211ENST00000635893 NDUFAF1Q9Y375 327 aa-2.1□□□□□ -2.75
SCN1A-211ENST00000635893 CEP350Q5VT06 3117 aa-2.11□□□□□ -2.75
SCN1A-211ENST00000635893 MYH1P12882 1939 aa-2.11□□□□□ -2.75
SCN1A-211ENST00000635893 M0QZK8 103 aa-2.11□□□□□ -2.75
SCN1A-211ENST00000635893 DEFB4AO15263 64 aa-2.11□□□□□ -2.75
SCN1A-211ENST00000635893 S100A6P06703 90 aa-2.11□□□□□ -2.75
SCN1A-211ENST00000635893 PCBD1P61457 104 aa-2.11□□□□□ -2.75
SCN1A-211ENST00000635893 SLC25A26Q70HW3 274 aa-2.11□□□□□ -2.75
SCN1A-211ENST00000635893 CFAP54Q96N23 3096 aa-2.11□□□□□ -2.75
SCN1A-211ENST00000635893 MYH2Q9UKX2 1941 aa-2.11□□□□□ -2.75
SCN1A-211ENST00000635893 J3KT08 172 aa-2.12□□□□□ -2.75
SCN1A-211ENST00000635893 E2F6O75461 281 aa-2.12□□□□□ -2.75
SCN1A-211ENST00000635893 CTXN2P0C2S0 81 aa-2.12□□□□□ -2.75
SCN1A-211ENST00000635893 SRP9P49458 86 aaKnown RBP-2.12□□□□□ -2.75
SCN1A-211ENST00000635893 LSM3P62310 102 aaKnown RBP-2.12□□□□□ -2.75
SCN1A-211ENST00000635893 C3orf33Q6P1S2 294 aa-2.12□□□□□ -2.75
SCN1A-211ENST00000635893 DHRS4L2Q6PKH6 230 aa-2.12□□□□□ -2.75
SCN1A-211ENST00000635893 DYDC1Q8WWB3 177 aa-2.12□□□□□ -2.75
SCN1A-211ENST00000635893 NUP210Q8TEM1 1887 aaPredicted RBP-2.12□□□□□ -2.75
SCN1A-211ENST00000635893 PARP14Q460N5 1801 aa-2.12□□□□□ -2.75
SCN1A-211ENST00000635893 ZNF236Q9UL36 1845 aa-2.12□□□□□ -2.75
SCN1A-211ENST00000635893 CAMSAP1Q5T5Y3 1602 aa-2.13□□□□□ -2.75
SCN1A-211ENST00000635893 MRC1P22897 1456 aa-2.13□□□□□ -2.75
SCN1A-211ENST00000635893 IFNA1P01562 189 aa-2.13□□□□□ -2.75
SCN1A-211ENST00000635893 LXNQ9BS40 222 aa-2.13□□□□□ -2.75
SCN1A-211ENST00000635893 CBLN4Q9NTU7 201 aa-2.13□□□□□ -2.75
SCN1A-211ENST00000635893 VPS13CQ709C8 3753 aa-2.13□□□□□ -2.75
SCN1A-211ENST00000635893 PITX3O75364 302 aa-2.14□□□□□ -2.75
SCN1A-211ENST00000635893 FGF7P21781 194 aa-2.14□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms