RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.71□□□□□ -0.21
MECP2-218ENST00000629277 MSMBP08118 114 aa13.71□□□□□ -0.21
MECP2-218ENST00000629277 ZFAND6Q6FIF0 208 aa13.71□□□□□ -0.21
MECP2-218ENST00000629277 Q6ZSN1 163 aa13.71□□□□□ -0.21
MECP2-218ENST00000629277 MXRA5Q9NR99 2828 aa13.71□□□□□ -0.22
MECP2-218ENST00000629277 TEX29Q8N6K0 151 aa13.71□□□□□ -0.22
MECP2-218ENST00000629277 CITED1Q99966 193 aa13.71□□□□□ -0.22
MECP2-218ENST00000629277 TMEM262E9PQX1 116 aa13.7□□□□□ -0.22
MECP2-218ENST00000629277 ATP5J2P56134 94 aa13.7□□□□□ -0.22
MECP2-218ENST00000629277 PRRC2AP48634 2157 aaKnown RBP13.7□□□□□ -0.22
MECP2-218ENST00000629277 USP9YO00507 2555 aaPredicted RBP13.7□□□□□ -0.22
MECP2-218ENST00000629277 DAND5Q8N907 189 aa13.7□□□□□ -0.22
MECP2-218ENST00000629277 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.69□□□□□ -0.22
MECP2-218ENST00000629277 IGKV2-29A2NJV5 120 aaPredicted RBP13.69□□□□□ -0.22
MECP2-218ENST00000629277 HERV-K104P63124 156 aa13.69□□□□□ -0.22
MECP2-218ENST00000629277 MRPS36P82909 103 aaKnown RBP13.69□□□□□ -0.22
MECP2-218ENST00000629277 NDUFA12Q9UI09 145 aa13.69□□□□□ -0.22
MECP2-218ENST00000629277 IGHV3-38A0A0C4DH36 116 aa13.68□□□□□ -0.22
MECP2-218ENST00000629277 DEFB112Q30KQ8 113 aa13.68□□□□□ -0.22
MECP2-218ENST00000629277 CLEC2BQ92478 149 aa13.68□□□□□ -0.22
MECP2-218ENST00000629277 TNFRSF18Q9Y5U5 241 aa13.68□□□□□ -0.22
MECP2-218ENST00000629277 IGHV1-58A0A0C4DH39 117 aa13.67□□□□□ -0.22
MECP2-218ENST00000629277 TRBV30A0A0K0K1B3 111 aa13.67□□□□□ -0.22
MECP2-218ENST00000629277 NHLRC4P0CG21 123 aaPredicted RBP13.67□□□□□ -0.22
MECP2-218ENST00000629277 NRGNQ92686 78 aa13.67□□□□□ -0.22
MECP2-218ENST00000629277 ICOSQ9Y6W8 199 aa13.67□□□□□ -0.22
MECP2-218ENST00000629277 TRGV11A0A075B6L2 103 aa13.66□□□□□ -0.22
MECP2-218ENST00000629277 TRBV10-2A0A0K0K1G8 114 aa13.66□□□□□ -0.22
MECP2-218ENST00000629277 PYGO1Q9Y3Y4 419 aa13.66□□□□□ -0.22
MECP2-218ENST00000629277 POLQO75417 2590 aa13.66□□□□□ -0.22
MECP2-218ENST00000629277 CENPEQ02224 2701 aa13.65□□□□□ -0.22
MECP2-218ENST00000629277 M0QXV9 152 aa13.65□□□□□ -0.22
MECP2-218ENST00000629277 VSIG2Q96IQ7 327 aa13.65□□□□□ -0.22
MECP2-218ENST00000629277 H7C423 109 aa13.65□□□□□ -0.22
MECP2-218ENST00000629277 SNCGO76070 127 aa13.65□□□□□ -0.22
MECP2-218ENST00000629277 HOXD3P31249 432 aaPredicted RBP13.65□□□□□ -0.22
MECP2-218ENST00000629277 CHCHD7Q9BUK0 85 aa13.65□□□□□ -0.22
MECP2-218ENST00000629277 DEFB136Q30KP8 78 aa13.64□□□□□ -0.23
MECP2-218ENST00000629277 SS18L2Q9UHA2 77 aa13.64□□□□□ -0.23
MECP2-218ENST00000629277 AKAP9Q99996 3911 aa13.64□□□□□ -0.23
MECP2-218ENST00000629277 C2orf82Q6UX34 121 aa13.64□□□□□ -0.23
MECP2-218ENST00000629277 MAPK1IP1LQ8NDC0 245 aa13.64□□□□□ -0.23
MECP2-218ENST00000629277 LINC00467Q9BRT7 94 aa13.64□□□□□ -0.23
MECP2-218ENST00000629277 DEFB131AP59861 70 aa13.63□□□□□ -0.23
MECP2-218ENST00000629277 GAGE2BQ13066 116 aa13.63□□□□□ -0.23
MECP2-218ENST00000629277 GAGE2EQ4V326 116 aa13.63□□□□□ -0.23
MECP2-218ENST00000629277 HIST2H2BDQ6DRA6 164 aa13.63□□□□□ -0.23
MECP2-218ENST00000629277 C18orf65Q6ZTR6 163 aa13.63□□□□□ -0.23
MECP2-218ENST00000629277 GAGE2DQ9UEU5 116 aa13.63□□□□□ -0.23
MECP2-218ENST00000629277 UBE2D4Q9Y2X8 147 aa13.63□□□□□ -0.23
MECP2-218ENST00000629277 RBMY1BA6NDE4 496 aaKnown RBP13.63□□□□□ -0.23
MECP2-218ENST00000629277 RBMY1EA6NEQ0 496 aaKnown RBP13.63□□□□□ -0.23
MECP2-218ENST00000629277 RBMY1DP0C7P1 496 aaKnown RBP13.63□□□□□ -0.23
MECP2-218ENST00000629277 MIAQ16674 131 aa13.63□□□□□ -0.23
MECP2-218ENST00000629277 DUX3Q96PT4 197 aa13.63□□□□□ -0.23
MECP2-218ENST00000629277 USP9XQ93008 2570 aaPredicted RBP13.62□□□□□ -0.23
MECP2-218ENST00000629277 TRAV8-4A0A0B4J246 113 aa13.62□□□□□ -0.23
MECP2-218ENST00000629277 H3BMM0 161 aa13.62□□□□□ -0.23
MECP2-218ENST00000629277 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.62□□□□□ -0.23
MECP2-218ENST00000629277 UBE2WQ96B02 151 aa13.62□□□□□ -0.23
MECP2-218ENST00000629277 B5MCH6 92 aa13.61□□□□□ -0.23
MECP2-218ENST00000629277 RPL13AP40429 203 aaKnown RBP13.61□□□□□ -0.23
MECP2-218ENST00000629277 SPANXDQ9BXN6 97 aa13.61□□□□□ -0.23
MECP2-218ENST00000629277 SPANXCQ9NY87 97 aa13.61□□□□□ -0.23
MECP2-218ENST00000629277 CDKN2A-AS1Q9UH64 79 aa13.61□□□□□ -0.23
MECP2-218ENST00000629277 A0A0U1RRA0 63 aa13.6□□□□□ -0.23
MECP2-218ENST00000629277 TINCRA0A1B0GVN0 87 aa13.6□□□□□ -0.23
MECP2-218ENST00000629277 NDUFV3P56181 108 aaKnown RBP13.6□□□□□ -0.23
MECP2-218ENST00000629277 C15orf53Q8NAA6 179 aa13.6□□□□□ -0.23
MECP2-218ENST00000629277 SLURP1P55000 103 aa13.59□□□□□ -0.23
MECP2-218ENST00000629277 TTC32Q5I0X7 151 aa13.59□□□□□ -0.23
MECP2-218ENST00000629277 TMEM61Q8N0U2 210 aa13.59□□□□□ -0.23
MECP2-218ENST00000629277 NACAE9PAV3 2078 aa13.59□□□□□ -0.23
MECP2-218ENST00000629277 B4DSR2 109 aa13.59□□□□□ -0.23
MECP2-218ENST00000629277 ZNF625Q96I27 306 aaPredicted RBP13.59□□□□□ -0.23
MECP2-218ENST00000629277 COX6A2Q02221 97 aa13.57□□□□□ -0.24
MECP2-218ENST00000629277 FBN2P35556 2912 aa13.57□□□□□ -0.24
MECP2-218ENST00000629277 GAGE5Q13069 117 aa13.57□□□□□ -0.24
MECP2-218ENST00000629277 GAGE6Q13070 117 aa13.57□□□□□ -0.24
MECP2-218ENST00000629277 CCDC179H3BU77 68 aa13.56□□□□□ -0.24
MECP2-218ENST00000629277 EDA2RQ9HAV5 297 aa13.56□□□□□ -0.24
MECP2-218ENST00000629277 PKD1L2Q7Z442 2459 aa13.56□□□□□ -0.24
MECP2-218ENST00000629277 NDUFA7O95182 113 aa13.56□□□□□ -0.24
MECP2-218ENST00000629277 COX6CP09669 75 aa13.55□□□□□ -0.24
MECP2-218ENST00000629277 TMEM101Q96IK0 257 aa13.55□□□□□ -0.24
MECP2-218ENST00000629277 SPANXA1Q9NS26 97 aa13.55□□□□□ -0.24
MECP2-218ENST00000629277 RNF152Q8N8N0 203 aa13.55□□□□□ -0.24
MECP2-218ENST00000629277 LINC01600Q96MT4 127 aa13.55□□□□□ -0.24
MECP2-218ENST00000629277 MYO9AB2RTY4 2548 aa13.55□□□□□ -0.24
MECP2-218ENST00000629277 LST1O00453 97 aa13.54□□□□□ -0.24
MECP2-218ENST00000629277 CITED2Q99967 270 aaPredicted RBP13.54□□□□□ -0.24
MECP2-218ENST00000629277 IFITM1P13164 125 aa13.54□□□□□ -0.24
MECP2-218ENST00000629277 NIPBLQ6KC79 2804 aaeCLIP13.54□□□□□ -0.24
MECP2-218ENST00000629277 LINC01587Q99440 93 aa13.53□□□□□ -0.24
MECP2-218ENST00000629277 YAE1D1Q9NRH1 226 aa13.53□□□□□ -0.24
MECP2-218ENST00000629277 C2CD3Q4AC94 2353 aa13.52□□□□□ -0.24
MECP2-218ENST00000629277 DOPEY1Q5JWR5 2465 aa13.52□□□□□ -0.25
MECP2-218ENST00000629277 TMEM89A2RUT3 159 aa13.51□□□□□ -0.25
MECP2-218ENST00000629277 ZNF415Q09FC8 603 aa13.51□□□□□ -0.25
MECP2-218ENST00000629277 C11orf72Q8NBR9 251 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms