RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 PANO1I0J062 215 aa8.84□□□□□ -0.99
USH1C-211ENST00000624811 SRSF3P84103 164 aaKnown RBP8.84□□□□□ -0.99
USH1C-211ENST00000624811 PEA15Q15121 130 aa8.84□□□□□ -0.99
USH1C-211ENST00000624811 RASL11AQ6T310 242 aa8.84□□□□□ -0.99
USH1C-211ENST00000624811 C20orf203Q8NBC4 194 aa8.84□□□□□ -0.99
USH1C-211ENST00000624811 TMEM243Q9BU79 118 aa8.84□□□□□ -0.99
USH1C-211ENST00000624811 GFRA4Q9GZZ7 299 aa8.84□□□□□ -0.99
USH1C-211ENST00000624811 FAT3Q8TDW7 4589 aa8.84□□□□□ -0.99
USH1C-211ENST00000624811 hDV102S1A0JD36 115 aa8.83□□□□□ -1
USH1C-211ENST00000624811 XKRY2A2RUG3 117 aa8.83□□□□□ -1
USH1C-211ENST00000624811 PDE6DO43924 150 aa8.83□□□□□ -1
USH1C-211ENST00000624811 TRGC1P0CF51 173 aa8.83□□□□□ -1
USH1C-211ENST00000624811 BCL2P10415 239 aa8.83□□□□□ -1
USH1C-211ENST00000624811 NTF3P20783 257 aa8.83□□□□□ -1
USH1C-211ENST00000624811 DGAT2L7PQ6IED9 249 aa8.83□□□□□ -1
USH1C-211ENST00000624811 C9orf163Q8N9P6 203 aa8.83□□□□□ -1
USH1C-211ENST00000624811 DPH3P1Q9H4G8 78 aa8.83□□□□□ -1
USH1C-211ENST00000624811 F2Z2F3 143 aa8.82□□□□□ -1
USH1C-211ENST00000624811 TAGLN2P37802 199 aaKnown RBP8.82□□□□□ -1
USH1C-211ENST00000624811 HNRNPA3P51991 378 aaKnown RBP8.82□□□□□ -1
USH1C-211ENST00000624811 NUDT10Q8NFP7 164 aa8.82□□□□□ -1
USH1C-211ENST00000624811 SMIM12Q96EX1 92 aa8.82□□□□□ -1
USH1C-211ENST00000624811 NUDT11Q96G61 164 aa8.82□□□□□ -1
USH1C-211ENST00000624811 SMDT1Q9H4I9 107 aa8.82□□□□□ -1
USH1C-211ENST00000624811 NIT2Q9NQR4 276 aa8.82□□□□□ -1
USH1C-211ENST00000624811 TRAV26-2A0A0B4J265 109 aa8.81□□□□□ -1
USH1C-211ENST00000624811 IGKV3OR2-268A0A0C4DH90 116 aa8.81□□□□□ -1
USH1C-211ENST00000624811 C9JQL5 133 aa8.81□□□□□ -1
USH1C-211ENST00000624811 UBE2L6O14933 153 aa8.81□□□□□ -1
USH1C-211ENST00000624811 AMTP48728 403 aa8.81□□□□□ -1
USH1C-211ENST00000624811 TWIST1Q15672 202 aa8.81□□□□□ -1
USH1C-211ENST00000624811 RNASE7Q9H1E1 156 aaKnown RBP8.81□□□□□ -1
USH1C-211ENST00000624811 S100A1P23297 94 aa8.8□□□□□ -1
USH1C-211ENST00000624811 COTL1Q14019 142 aa8.8□□□□□ -1
USH1C-211ENST00000624811 SDIM1Q6ZPB5 146 aa8.8□□□□□ -1
USH1C-211ENST00000624811 CLRN3Q8NCR9 226 aa8.8□□□□□ -1
USH1C-211ENST00000624811 BIN3Q9NQY0 253 aa8.8□□□□□ -1
USH1C-211ENST00000624811 PKHD1L1Q86WI1 4243 aa8.8□□□□□ -1
USH1C-211ENST00000624811 HMCN2Q8NDA2 5059 aa8.8□□□□□ -1
USH1C-211ENST00000624811 TRAV8-4A0A0B4J246 113 aa8.79□□□□□ -1
USH1C-211ENST00000624811 A0A1B0GUV1 79 aa8.79□□□□□ -1
USH1C-211ENST00000624811 TMEM218A2RU14 115 aa8.79□□□□□ -1
USH1C-211ENST00000624811 OXTP01178 125 aa8.79□□□□□ -1
USH1C-211ENST00000624811 SRP19P09132 144 aaKnown RBP8.79□□□□□ -1
USH1C-211ENST00000624811 CTRLP40313 264 aa8.79□□□□□ -1
USH1C-211ENST00000624811 DPH3Q96FX2 82 aa8.79□□□□□ -1
USH1C-211ENST00000624811 PGLYRP4Q96LB8 373 aa8.79□□□□□ -1
USH1C-211ENST00000624811 RPP21Q9H633 154 aaKnown RBP8.79□□□□□ -1
USH1C-211ENST00000624811 K7EN84 100 aa8.78□□□□□ -1
USH1C-211ENST00000624811 NDUFS6O75380 124 aaKnown RBP8.78□□□□□ -1
USH1C-211ENST00000624811 CHTF8P0CG12 524 aa8.78□□□□□ -1
USH1C-211ENST00000624811 WDR73Q6P4I2 378 aa8.78□□□□□ -1
USH1C-211ENST00000624811 GATD1Q8NB37 220 aa8.78□□□□□ -1
USH1C-211ENST00000624811 OCC1Q8TAD7 63 aa8.78□□□□□ -1
USH1C-211ENST00000624811 AP5S1Q9NUS5 200 aa8.78□□□□□ -1
USH1C-211ENST00000624811 IGHV3-64A0A075B6Q5 118 aa8.77□□□□□ -1.01
USH1C-211ENST00000624811 GAGE12HA6NDE8 117 aa8.77□□□□□ -1.01
USH1C-211ENST00000624811 SLPIP03973 132 aa8.77□□□□□ -1.01
USH1C-211ENST00000624811 FOXA3P55318 350 aaPredicted RBP8.77□□□□□ -1.01
USH1C-211ENST00000624811 CNBPP62633 177 aaKnown RBP8.77□□□□□ -1.01
USH1C-211ENST00000624811 RPL39LQ96EH5 51 aaKnown RBP8.77□□□□□ -1.01
USH1C-211ENST00000624811 F8W036 122 aa8.76□□□□□ -1.01
USH1C-211ENST00000624811 TMEM250H0YL14 139 aa8.76□□□□□ -1.01
USH1C-211ENST00000624811 ADCYAP1P18509 176 aa8.76□□□□□ -1.01
USH1C-211ENST00000624811 CEBPGP53567 150 aa8.76□□□□□ -1.01
USH1C-211ENST00000624811 SERTAD4-AS1Q5TG53 156 aa8.76□□□□□ -1.01
USH1C-211ENST00000624811 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.75□□□□□ -1.01
USH1C-211ENST00000624811 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.75□□□□□ -1.01
USH1C-211ENST00000624811 IGKV2-29A2NJV5 120 aaPredicted RBP8.75□□□□□ -1.01
USH1C-211ENST00000624811 HIGD2BQ4VC39 106 aa8.75□□□□□ -1.01
USH1C-211ENST00000624811 AMMECR1LQ6DCA0 310 aa8.75□□□□□ -1.01
USH1C-211ENST00000624811 RNASEKQ6P5S7 137 aaKnown RBP8.75□□□□□ -1.01
USH1C-211ENST00000624811 GTSF1Q8WW33 167 aa8.75□□□□□ -1.01
USH1C-211ENST00000624811 SEC11CQ9BY50 192 aa8.75□□□□□ -1.01
USH1C-211ENST00000624811 C10orf91Q5T1B1 145 aa8.74□□□□□ -1.01
USH1C-211ENST00000624811 C15orf56Q8N910 161 aa8.74□□□□□ -1.01
USH1C-211ENST00000624811 CNFNQ9BYD5 112 aa8.74□□□□□ -1.01
USH1C-211ENST00000624811 A0A087WYN8 130 aa8.73□□□□□ -1.01
USH1C-211ENST00000624811 GATCO43716 136 aaKnown RBP8.73□□□□□ -1.01
USH1C-211ENST00000624811 APCSP02743 223 aa8.73□□□□□ -1.01
USH1C-211ENST00000624811 CIRBPQ14011 172 aaKnown RBP8.73□□□□□ -1.01
USH1C-211ENST00000624811 SMIM15Q7Z3B0 74 aa8.73□□□□□ -1.01
USH1C-211ENST00000624811 CHCHD10Q8WYQ3 142 aaPredicted RBP8.73□□□□□ -1.01
USH1C-211ENST00000624811 CARHSP1Q9Y2V2 147 aaKnown RBP8.73□□□□□ -1.01
USH1C-211ENST00000624811 UBR4Q5T4S7 5183 aa8.72□□□□□ -1.01
USH1C-211ENST00000624811 ZNF727A8MUV8 499 aa8.72□□□□□ -1.01
USH1C-211ENST00000624811 APOC3P02656 99 aa8.72□□□□□ -1.01
USH1C-211ENST00000624811 SPACA4Q8TDM5 124 aa8.72□□□□□ -1.01
USH1C-211ENST00000624811 PLA2G2DQ9UNK4 145 aa8.72□□□□□ -1.01
USH1C-211ENST00000624811 SDHAF1A6NFY7 115 aa8.71□□□□□ -1.02
USH1C-211ENST00000624811 FGF6P10767 208 aa8.71□□□□□ -1.02
USH1C-211ENST00000624811 COX6A2Q02221 97 aa8.71□□□□□ -1.02
USH1C-211ENST00000624811 FAM74A3Q4VXF1 159 aa8.71□□□□□ -1.02
USH1C-211ENST00000624811 CFAP161Q6P656 301 aa8.71□□□□□ -1.02
USH1C-211ENST00000624811 SMIM7Q9BQ49 75 aa8.71□□□□□ -1.02
USH1C-211ENST00000624811 IGKV2-24A0A0C4DH68 120 aa8.7□□□□□ -1.02
USH1C-211ENST00000624811 GAS8-AS1O95177 125 aa8.7□□□□□ -1.02
USH1C-211ENST00000624811 NCR2O95944 276 aa8.7□□□□□ -1.02
USH1C-211ENST00000624811 PMCHP20382 165 aa8.7□□□□□ -1.02
USH1C-211ENST00000624811 A8MWL6 223 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms