RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 C22orf34Q6ZV56 151 aa4.28□□□□□ -1.72
ERCC6-213ENST00000624341 MIR7-3HGQ8N6C7 128 aa4.28□□□□□ -1.72
ERCC6-213ENST00000624341 CCL24O00175 119 aa4.28□□□□□ -1.72
ERCC6-213ENST00000624341 P0DMU3 169 aa4.28□□□□□ -1.72
ERCC6-213ENST00000624341 FAM231AP0DMU4 169 aa4.28□□□□□ -1.72
ERCC6-213ENST00000624341 FAM231CP0DMU5 169 aa4.28□□□□□ -1.72
ERCC6-213ENST00000624341 GYPEP15421 78 aa4.28□□□□□ -1.72
ERCC6-213ENST00000624341 TRBV7-3A0A075B6L6 115 aa4.28□□□□□ -1.72
ERCC6-213ENST00000624341 IGHV4-28A0A0C4DH34 117 aa4.28□□□□□ -1.72
ERCC6-213ENST00000624341 CRYGBP07316 175 aa4.28□□□□□ -1.72
ERCC6-213ENST00000624341 MED14OSP0DP75 135 aa4.28□□□□□ -1.72
ERCC6-213ENST00000624341 CCL18P55774 89 aa4.28□□□□□ -1.72
ERCC6-213ENST00000624341 LRP4O75096 1905 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 LINC00310P59036 64 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 C2orf91Q6ZV80 131 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 NFE4Q86UQ8 179 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 CCDC140Q96MF4 163 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 NAV2Q8IVL1 2488 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 A0A0J9YXY3 114 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 DAZ2Q13117 558 aaKnown RBP4.27□□□□□ -1.73
ERCC6-213ENST00000624341 DAZ4Q86SG3 579 aaKnown RBP4.27□□□□□ -1.73
ERCC6-213ENST00000624341 TMEM61Q8N0U2 210 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 LINC00574Q9H8X3 128 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 DAZ3Q9NR90 486 aaKnown RBP4.27□□□□□ -1.73
ERCC6-213ENST00000624341 NDUFV3P56181 108 aaKnown RBP4.27□□□□□ -1.73
ERCC6-213ENST00000624341 TMEM258P61165 79 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 NEXN-AS1Q8NBZ9 246 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 ARHGAP32A7KAX9 2087 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 HCFC1P51610 2035 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 J3KT08 172 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 PSMB8P28062 276 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 PTPRBP23467 1997 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 IGKV2D-24A0A075B6R9 120 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 C14orf132Q9NPU4 83 aa4.27□□□□□ -1.73
ERCC6-213ENST00000624341 A0A0J9YX75 114 aa4.26□□□□□ -1.73
ERCC6-213ENST00000624341 K7EMT4 169 aa4.26□□□□□ -1.73
ERCC6-213ENST00000624341 IGHG2P01859 326 aa4.26□□□□□ -1.73
ERCC6-213ENST00000624341 ATP5G1P05496 136 aa4.26□□□□□ -1.73
ERCC6-213ENST00000624341 MYCNOSP40205 109 aa4.26□□□□□ -1.73
ERCC6-213ENST00000624341 NRGNQ92686 78 aa4.26□□□□□ -1.73
ERCC6-213ENST00000624341 SPANXCQ9NY87 97 aa4.26□□□□□ -1.73
ERCC6-213ENST00000624341 EYSQ5T1H1 3165 aa4.26□□□□□ -1.73
ERCC6-213ENST00000624341 SPEGQ15772 3267 aa4.26□□□□□ -1.73
ERCC6-213ENST00000624341 COX7A2LO14548 114 aa4.26□□□□□ -1.73
ERCC6-213ENST00000624341 MIAQ16674 131 aa4.26□□□□□ -1.73
ERCC6-213ENST00000624341 TLN1Q9Y490 2541 aaKnown RBP4.26□□□□□ -1.73
ERCC6-213ENST00000624341 LINC00643Q86TS7 51 aa4.26□□□□□ -1.73
ERCC6-213ENST00000624341 RNF185Q96GF1 192 aa4.26□□□□□ -1.73
ERCC6-213ENST00000624341 SIRPDQ9H106 197 aa4.26□□□□□ -1.73
ERCC6-213ENST00000624341 TMEM131Q92545 1883 aa4.26□□□□□ -1.73
ERCC6-213ENST00000624341 NCR3O14931 201 aa4.25□□□□□ -1.73
ERCC6-213ENST00000624341 IGLV2-11P01706 119 aa4.25□□□□□ -1.73
ERCC6-213ENST00000624341 ADORA2A-AS1P86434 159 aa4.25□□□□□ -1.73
ERCC6-213ENST00000624341 RNF152Q8N8N0 203 aa4.25□□□□□ -1.73
ERCC6-213ENST00000624341 IGF2RP11717 2491 aa4.25□□□□□ -1.73
ERCC6-213ENST00000624341 GAS8-AS1O95177 125 aa4.25□□□□□ -1.73
ERCC6-213ENST00000624341 DAZAP2Q15038 168 aaPredicted RBP4.25□□□□□ -1.73
ERCC6-213ENST00000624341 CAMK2N2Q96S95 79 aa4.25□□□□□ -1.73
ERCC6-213ENST00000624341 CDKN2A-AS1Q9UH64 79 aa4.25□□□□□ -1.73
ERCC6-213ENST00000624341 ZNF22P17026 224 aaPredicted RBP4.25□□□□□ -1.73
ERCC6-213ENST00000624341 INSL3P51460 131 aa4.25□□□□□ -1.73
ERCC6-213ENST00000624341 C16orf74Q96GX8 76 aa4.25□□□□□ -1.73
ERCC6-213ENST00000624341 SETD2Q9BYW2 2564 aaPredicted RBP4.24□□□□□ -1.73
ERCC6-213ENST00000624341 JMJD7-PLA2G4BH0Y9G9 81 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 NDUFB1O75438 58 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 IGHV3-30P01768 117 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 IGHV3-33P01772 117 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 IGHV3-30-5P0DP03 117 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 Q8N976 141 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 KIR2DL5BQ8NHK3 375 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 C10orf105Q8TEF2 133 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 C20orf173Q96LM9 149 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 SMAD5-AS1Q9Y6J3 95 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 NCOR2Q9Y618 2525 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 DNAH14Q0VDD8 3507 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 NREPQ16612 68 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 C5orf47Q569G3 176 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 U3KQK5 164 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 TRAV23DV6A0A075B6W5 121 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 TRIAP1O43715 76 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 FUSP35637 526 aaKnown RBP eCLIP4.24□□□□□ -1.73
ERCC6-213ENST00000624341 TIRAPP58753 221 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 MYO15AQ9UKN7 3530 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 DEFB4AO15263 64 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 SDIM1Q6ZPB5 146 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 HHLA3Q9XRX5 114 aa4.24□□□□□ -1.73
ERCC6-213ENST00000624341 IGLV4-3A0A075B6K6 122 aa4.23□□□□□ -1.73
ERCC6-213ENST00000624341 HIST2H2BDQ6DRA6 164 aa4.23□□□□□ -1.73
ERCC6-213ENST00000624341 TLN2Q9Y4G6 2542 aa4.23□□□□□ -1.73
ERCC6-213ENST00000624341 ETDCA0A1B0GVM5 59 aa4.23□□□□□ -1.73
ERCC6-213ENST00000624341 ODF3BA8MYP8 253 aa4.23□□□□□ -1.73
ERCC6-213ENST00000624341 A8MZ25 164 aa4.23□□□□□ -1.73
ERCC6-213ENST00000624341 UBE2AP49459 152 aa4.23□□□□□ -1.73
ERCC6-213ENST00000624341 ZFAND2AQ8N6M9 145 aa4.23□□□□□ -1.73
ERCC6-213ENST00000624341 URB1-AS1Q96HZ7 61 aa4.23□□□□□ -1.73
ERCC6-213ENST00000624341 TMEM223A0PJW6 202 aa4.23□□□□□ -1.73
ERCC6-213ENST00000624341 RPL18AQ02543 176 aaKnown RBP4.23□□□□□ -1.73
ERCC6-213ENST00000624341 LINC00467Q9BRT7 94 aa4.23□□□□□ -1.73
ERCC6-213ENST00000624341 K7ERS5 55 aa4.23□□□□□ -1.73
ERCC6-213ENST00000624341 MRPS12O15235 138 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms