RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 C16orf95Q9H693 158 aa9.26□□□□□ -0.93
LITAF-221ENST00000622633 F6UB75 175 aa9.25□□□□□ -0.93
LITAF-221ENST00000622633 PRIMA1Q86XR5 153 aa9.25□□□□□ -0.93
LITAF-221ENST00000622633 SERP2Q8N6R1 65 aa9.25□□□□□ -0.93
LITAF-221ENST00000622633 IGHV4-61A0A0C4DH41 118 aa9.25□□□□□ -0.93
LITAF-221ENST00000622633 S100A4P26447 101 aaKnown RBP9.25□□□□□ -0.93
LITAF-221ENST00000622633 RNASE4P34096 147 aaKnown RBP9.25□□□□□ -0.93
LITAF-221ENST00000622633 IL17DQ8TAD2 202 aa9.25□□□□□ -0.93
LITAF-221ENST00000622633 LENEPQ9Y5L5 61 aa9.25□□□□□ -0.93
LITAF-221ENST00000622633 TMEM223A0PJW6 202 aa9.24□□□□□ -0.93
LITAF-221ENST00000622633 SOCS3O14543 225 aa9.24□□□□□ -0.93
LITAF-221ENST00000622633 IGHV4-38-2P0DP08 117 aa9.24□□□□□ -0.93
LITAF-221ENST00000622633 TSPEAR-AS2P59090 65 aa9.24□□□□□ -0.93
LITAF-221ENST00000622633 RPL18AQ02543 176 aaKnown RBP9.24□□□□□ -0.93
LITAF-221ENST00000622633 WFDC11Q8NEX6 87 aa9.24□□□□□ -0.93
LITAF-221ENST00000622633 SMIM2Q9BVW6 85 aa9.24□□□□□ -0.93
LITAF-221ENST00000622633 TRAV21A0A0B4J279 112 aa9.24□□□□□ -0.93
LITAF-221ENST00000622633 A0A0U1RQV1 116 aa9.24□□□□□ -0.93
LITAF-221ENST00000622633 NDUFA4O00483 81 aa9.24□□□□□ -0.93
LITAF-221ENST00000622633 GNRH2O43555 120 aa9.24□□□□□ -0.93
LITAF-221ENST00000622633 RHOHQ15669 191 aa9.24□□□□□ -0.93
LITAF-221ENST00000622633 RPL39LQ96EH5 51 aaKnown RBP9.24□□□□□ -0.93
LITAF-221ENST00000622633 ABCA2Q9BZC7 2435 aa9.23□□□□□ -0.93
LITAF-221ENST00000622633 GNLYP22749 145 aa9.23□□□□□ -0.93
LITAF-221ENST00000622633 PSMB8P28062 276 aa9.23□□□□□ -0.93
LITAF-221ENST00000622633 SCGB3A1Q96QR1 104 aa9.23□□□□□ -0.93
LITAF-221ENST00000622633 PHLDA3Q9Y5J5 127 aa9.23□□□□□ -0.93
LITAF-221ENST00000622633 BLCAPP62952 87 aa9.23□□□□□ -0.93
LITAF-221ENST00000622633 AMELXQ99217 191 aa9.23□□□□□ -0.93
LITAF-221ENST00000622633 PEMTQ9UBM1 199 aa9.23□□□□□ -0.93
LITAF-221ENST00000622633 MGPP08493 103 aa9.22□□□□□ -0.93
LITAF-221ENST00000622633 SUMO2P61956 95 aaKnown RBP9.22□□□□□ -0.93
LITAF-221ENST00000622633 VPS13CQ709C8 3753 aa9.22□□□□□ -0.93
LITAF-221ENST00000622633 H3BUX3 64 aa9.22□□□□□ -0.93
LITAF-221ENST00000622633 FHL2Q14192 279 aa9.22□□□□□ -0.93
LITAF-221ENST00000622633 MUSTN1Q8IVN3 82 aa9.21□□□□□ -0.93
LITAF-221ENST00000622633 DCANP1Q8TF63 244 aa9.21□□□□□ -0.93
LITAF-221ENST00000622633 CLEC2BQ92478 149 aa9.21□□□□□ -0.93
LITAF-221ENST00000622633 RHPN1-AS1Q9BWJ2 59 aa9.21□□□□□ -0.93
LITAF-221ENST00000622633 TOMM6Q96B49 74 aa9.21□□□□□ -0.94
LITAF-221ENST00000622633 USMG5Q96IX5 58 aa9.21□□□□□ -0.94
LITAF-221ENST00000622633 MAP1AP78559 2803 aaPredicted RBP9.2□□□□□ -0.94
LITAF-221ENST00000622633 IGHG2P01859 326 aa9.2□□□□□ -0.94
LITAF-221ENST00000622633 ORMDL2Q53FV1 153 aa9.2□□□□□ -0.94
LITAF-221ENST00000622633 TP53TG1Q9Y2A0 90 aa9.2□□□□□ -0.94
LITAF-221ENST00000622633 C11orf86A6NJI1 115 aa9.2□□□□□ -0.94
LITAF-221ENST00000622633 RNF223E7ERA6 249 aa9.2□□□□□ -0.94
LITAF-221ENST00000622633 LST1O00453 97 aa9.2□□□□□ -0.94
LITAF-221ENST00000622633 COL12A1Q99715 3063 aa9.2□□□□□ -0.94
LITAF-221ENST00000622633 TRAV12-2A0A075B6T6 113 aa9.19□□□□□ -0.94
LITAF-221ENST00000622633 A6NDX4 124 aa9.19□□□□□ -0.94
LITAF-221ENST00000622633 RNASE3P12724 160 aaKnown RBP9.19□□□□□ -0.94
LITAF-221ENST00000622633 NPC2P61916 151 aa9.19□□□□□ -0.94
LITAF-221ENST00000622633 LINC00482Q8N8I6 264 aa9.19□□□□□ -0.94
LITAF-221ENST00000622633 DEFB104AQ8WTQ1 72 aa9.19□□□□□ -0.94
LITAF-221ENST00000622633 ICOSQ9Y6W8 199 aa9.19□□□□□ -0.94
LITAF-221ENST00000622633 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.19□□□□□ -0.94
LITAF-221ENST00000622633 A0A0U1RRA0 63 aa9.19□□□□□ -0.94
LITAF-221ENST00000622633 C6orf226Q5I0X4 101 aa9.19□□□□□ -0.94
LITAF-221ENST00000622633 ITPR1Q14643 2758 aa9.18□□□□□ -0.94
LITAF-221ENST00000622633 SPG11Q96JI7 2443 aa9.18□□□□□ -0.94
LITAF-221ENST00000622633 IGLV4-69A0A075B6H9 119 aa9.17□□□□□ -0.94
LITAF-221ENST00000622633 NDUFC2-KCTD14E9PQ53 114 aa9.17□□□□□ -0.94
LITAF-221ENST00000622633 SYNJ2BPP57105 145 aa9.17□□□□□ -0.94
LITAF-221ENST00000622633 C2orf66Q6UXQ4 117 aa9.17□□□□□ -0.94
LITAF-221ENST00000622633 FP248Q71RG6 208 aaPredicted RBP9.17□□□□□ -0.94
LITAF-221ENST00000622633 TIMM21Q9BVV7 248 aa9.17□□□□□ -0.94
LITAF-221ENST00000622633 IGHV4-30-2A0A087WSY4 118 aa9.17□□□□□ -0.94
LITAF-221ENST00000622633 H3BUA1 57 aa9.17□□□□□ -0.94
LITAF-221ENST00000622633 CCL19Q99731 98 aa9.17□□□□□ -0.94
LITAF-221ENST00000622633 FAM19A1Q7Z5A9 133 aa9.16□□□□□ -0.94
LITAF-221ENST00000622633 APRG1Q8IVJ8 170 aa9.16□□□□□ -0.94
LITAF-221ENST00000622633 TRAV8-3A0A0A6YYJ7 113 aa9.16□□□□□ -0.94
LITAF-221ENST00000622633 PRSS2P07478 247 aa9.16□□□□□ -0.94
LITAF-221ENST00000622633 MED14OSP0DP75 135 aa9.16□□□□□ -0.94
LITAF-221ENST00000622633 DAZ1Q9NQZ3 744 aaKnown RBP9.16□□□□□ -0.94
LITAF-221ENST00000622633 IGLV1-40P01703 118 aa9.15□□□□□ -0.94
LITAF-221ENST00000622633 BRK1Q8WUW1 75 aa9.15□□□□□ -0.94
LITAF-221ENST00000622633 SERP1Q9Y6X1 66 aa9.15□□□□□ -0.94
LITAF-221ENST00000622633 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.15□□□□□ -0.942e-6■■□□□ 13.8
LITAF-221ENST00000622633 LINC00315P59091 139 aa9.15□□□□□ -0.94
LITAF-221ENST00000622633 MUC4Q99102 2169 aa9.14□□□□□ -0.95
LITAF-221ENST00000622633 NDUFC2O95298 119 aa9.14□□□□□ -0.95
LITAF-221ENST00000622633 COX6CP09669 75 aa9.14□□□□□ -0.95
LITAF-221ENST00000622633 KIF25-AS1Q9Y6Z4 181 aa9.14□□□□□ -0.95
LITAF-221ENST00000622633 A0A087WWL8 130 aa9.14□□□□□ -0.95
LITAF-221ENST00000622633 TRAV12-3A0A0B4J271 114 aa9.14□□□□□ -0.95
LITAF-221ENST00000622633 KLLNB2CW77 178 aa9.13□□□□□ -0.95
LITAF-221ENST00000622633 MSMBP08118 114 aa9.13□□□□□ -0.95
LITAF-221ENST00000622633 NXPH4O95158 308 aa9.13□□□□□ -0.95
LITAF-221ENST00000622633 NACAE9PAV3 2078 aa9.13□□□□□ -0.95
LITAF-221ENST00000622633 F5H697 171 aa9.12□□□□□ -0.95
LITAF-221ENST00000622633 PPP1R17O96001 155 aa9.12□□□□□ -0.95
LITAF-221ENST00000622633 IGKV3-20P01619 116 aa9.12□□□□□ -0.95
LITAF-221ENST00000622633 CFHR3Q02985 330 aa9.12□□□□□ -0.95
LITAF-221ENST00000622633 C10orf99Q6UWK7 81 aa9.12□□□□□ -0.95
LITAF-221ENST00000622633 PRRC2AP48634 2157 aaKnown RBP9.12□□□□□ -0.95
LITAF-221ENST00000622633 CSPG4Q6UVK1 2322 aa9.12□□□□□ -0.95
LITAF-221ENST00000622633 A0A087WVE0 104 aa9.12□□□□□ -0.95
LITAF-221ENST00000622633 USP17L23D6RBM5 183 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms