RNA–Protein interactions for RNA: ENST00000621605.1

SYNRG-230, Transcript of synergin gamma, humanhuman

TSL 5

Gene SYNRG, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-230ENST00000621605 H0YJX3 145 aa-0.33□□□□□ -2.46
SYNRG-230ENST00000621605 TNRC18O15417 2968 aaPredicted RBP-0.33□□□□□ -2.46
SYNRG-230ENST00000621605 MT1AP04731 61 aa-0.33□□□□□ -2.46
SYNRG-230ENST00000621605 RRAS2P62070 204 aaPredicted RBP-0.33□□□□□ -2.46
SYNRG-230ENST00000621605 C9orf116Q5BN46 136 aaPredicted RBP-0.33□□□□□ -2.46
SYNRG-230ENST00000621605 Q5VV11 94 aa-0.33□□□□□ -2.46
SYNRG-230ENST00000621605 Q8IZM0 81 aa-0.33□□□□□ -2.46
SYNRG-230ENST00000621605 PSMG3Q9BT73 122 aaPredicted RBP-0.33□□□□□ -2.46
SYNRG-230ENST00000621605 MYH3P11055 1940 aa-0.33□□□□□ -2.46
SYNRG-230ENST00000621605 AKAP11Q9UKA4 1901 aa-0.33□□□□□ -2.46
SYNRG-230ENST00000621605 IBTKQ9P2D0 1353 aaPredicted RBP-0.33□□□□□ -2.46
SYNRG-230ENST00000621605 VIRMAQ69YN4 1812 aaKnown RBP-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 ERCC6Q03468 1493 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 WDR97A6NE52 1622 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 HELZP42694 1942 aaKnown RBP-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 ZZEF1O43149 2961 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 DNAH1Q9P2D7 4330 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 TRBV20-1A0A075B6N2 111 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 GNG14A0A1W2PPG7 69 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 CLPSL1A2RUU4 121 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 APOC4-APOC2K7ER74 178 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 SNCGO76070 127 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 SCTP09683 121 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 RBM3P98179 157 aaKnown RBP-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 CCDC153Q494R4 210 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 SPANXN1Q5VSR9 72 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 CFAP126Q5VTH2 177 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 NBEAL2Q6ZNJ1 2754 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 MMGT1Q8N4V1 131 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 SPRR2FQ96RM1 72 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 DDA1Q9BW61 102 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 SMIM3Q9BZL3 60 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 PLECQ15149 4684 aaKnown RBP-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 DMXL1Q9Y485 3027 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 WDR87Q6ZQQ6 2873 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 RNF213Q63HN8 5207 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 PPRC1Q5VV67 1664 aaKnown RBP-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 ZMYM4Q5VZL5 1548 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 LRRK2Q5S007 2527 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 UTP20O75691 2785 aaKnown RBP-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 CASZ1Q86V15 1759 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 DLEC1Q9Y238 1755 aa-0.34□□□□□ -2.46
SYNRG-230ENST00000621605 NHSL1Q5SYE7 1610 aa-0.35□□□□□ -2.46
SYNRG-230ENST00000621605 BIVM-ERCC5R4GMW8 1640 aa-0.35□□□□□ -2.46
SYNRG-230ENST00000621605 ACACAQ13085 2346 aa-0.35□□□□□ -2.46
SYNRG-230ENST00000621605 DSPP15924 2871 aaKnown RBP-0.35□□□□□ -2.46
SYNRG-230ENST00000621605 NUP210Q8TEM1 1887 aaPredicted RBP-0.35□□□□□ -2.46
SYNRG-230ENST00000621605 TNS1Q9HBL0 1735 aaKnown RBP-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 DNAH8Q96JB1 4490 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 VPS13BQ7Z7G8 4022 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 ZFHX3Q15911 3703 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 A0A1B0GX51 115 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 K7ERU9 68 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 BCE1O60756 84 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 IL5P05113 134 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 SPRR1AP35321 89 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 BAGE3Q86Y29 109 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 VSTM2AQ8TAG5 236 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 WFDC6Q9BQY6 131 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 CMYA5Q8N3K9 4069 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 KIDINS220Q9ULH0 1771 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 TRANK1O15050 2925 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 PLXNA2O75051 1894 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 PTPRMP28827 1452 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 BCL9LQ86UU0 1499 aa-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 LAMA2P24043 3122 aaKnown RBP-0.35□□□□□ -2.47
SYNRG-230ENST00000621605 CEP290O15078 2479 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 PKD1L2Q7Z442 2459 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 CCDC168Q8NDH2 2452 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 SYNJ1O43426 1573 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 SACSQ9NZJ4 4579 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 MGAM2Q2M2H8 2515 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 I3L2K1 104 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 J3QR89 54 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 PIN1P1O15428 100 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 KALRNO60229 2985 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 DBIP07108 87 aaKnown RBP-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 IGLC6P0CF74 106 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 S100A5P33763 92 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 HIST1H1AQ02539 215 aaPredicted RBP-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 AIF1LQ9BQI0 150 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 SAR1AQ9NR31 198 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 SPCS1Q9Y6A9 102 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 LINC00312Q9Y6C7 94 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 RIF1Q5UIP0 2472 aaKnown RBP-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 LAMA1P25391 3075 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 GCN1Q92616 2671 aaKnown RBP-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 GOLGA3Q08378 1498 aa-0.36□□□□□ -2.47
SYNRG-230ENST00000621605 NBEAQ8NFP9 2946 aa-0.37□□□□□ -2.47
SYNRG-230ENST00000621605 USP9XQ93008 2570 aaPredicted RBP-0.37□□□□□ -2.47
SYNRG-230ENST00000621605 LOC730098B7Z3J9 87 aa-0.37□□□□□ -2.47
SYNRG-230ENST00000621605 M0R2Z0 102 aa-0.37□□□□□ -2.47
SYNRG-230ENST00000621605 PITX3O75364 302 aa-0.37□□□□□ -2.47
SYNRG-230ENST00000621605 IFNA17P01571 189 aa-0.37□□□□□ -2.47
SYNRG-230ENST00000621605 LINC00694P0DN24 101 aa-0.37□□□□□ -2.47
SYNRG-230ENST00000621605 S100A3P33764 101 aa-0.37□□□□□ -2.47
SYNRG-230ENST00000621605 UBE2D1P51668 147 aa-0.37□□□□□ -2.47
SYNRG-230ENST00000621605 SPTSSAQ969W0 71 aa-0.37□□□□□ -2.47
SYNRG-230ENST00000621605 SEC11CQ9BY50 192 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms