RNA–Protein interactions for RNA: ENST00000621605.1

SYNRG-230, Transcript of synergin gamma, humanhuman

TSL 5

Gene SYNRG, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-230ENST00000621605 AEBP2Q6ZN18 517 aaPredicted RBP16.11■□□□□ 0.17
SYNRG-230ENST00000621605 CHIC1Q5VXU3 224 aa15.46■□□□□ 0.07
SYNRG-230ENST00000621605 SENP3Q9H4L4 574 aaPredicted RBP13.76□□□□□ -0.21
SYNRG-230ENST00000621605 PHF23Q9BUL5 403 aaPredicted RBP13.55□□□□□ -0.24
SYNRG-230ENST00000621605 FOXD1Q16676 465 aa12.86□□□□□ -0.35
SYNRG-230ENST00000621605 PLPPR3Q6T4P5 718 aa12.49□□□□□ -0.41
SYNRG-230ENST00000621605 POTEDQ86YR6 584 aa12.24□□□□□ -0.45
SYNRG-230ENST00000621605 MSH5O43196 834 aa12.12□□□□□ -0.47
SYNRG-230ENST00000621605 PPP6R1Q9UPN7 881 aa12□□□□□ -0.49
SYNRG-230ENST00000621605 ADRA2BP18089 450 aa11.99□□□□□ -0.49
SYNRG-230ENST00000621605 PIAS4Q8N2W9 510 aaPredicted RBP11.96□□□□□ -0.49
SYNRG-230ENST00000621605 SCAF1Q9H7N4 1312 aaKnown RBP11.11□□□□□ -0.63
SYNRG-230ENST00000621605 MAPK8IP2Q13387 824 aaPredicted RBP10.94□□□□□ -0.66
SYNRG-230ENST00000621605 PPP4R3CPQ6ZMV5 832 aa10.93□□□□□ -0.66
SYNRG-230ENST00000621605 DMRT2Q9Y5R5 561 aa10.91□□□□□ -0.66
SYNRG-230ENST00000621605 CNKSR2Q8WXI2 1034 aa10.72□□□□□ -0.69
SYNRG-230ENST00000621605 NCBP3Q53F19 620 aaKnown RBP10.65□□□□□ -0.7
SYNRG-230ENST00000621605 HOXD11P31277 338 aaPredicted RBP10.58□□□□□ -0.72
SYNRG-230ENST00000621605 RNF216Q9NWF9 866 aaPredicted RBP10.57□□□□□ -0.72
SYNRG-230ENST00000621605 CACNB1Q02641 598 aaPredicted RBP10.54□□□□□ -0.72
SYNRG-230ENST00000621605 DCAF8L1A6NGE4 600 aa10.44□□□□□ -0.74
SYNRG-230ENST00000621605 NPM3O75607 178 aaKnown RBP10.39□□□□□ -0.75
SYNRG-230ENST00000621605 KCNA4P22459 653 aa10.33□□□□□ -0.76
SYNRG-230ENST00000621605 RNF39Q9H2S5 420 aa10.33□□□□□ -0.76
SYNRG-230ENST00000621605 DNAJC5BQ9UF47 199 aa10.25□□□□□ -0.77
SYNRG-230ENST00000621605 C1QBPQ07021 282 aaKnown RBP10.15□□□□□ -0.78
SYNRG-230ENST00000621605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.1□□□□□ -0.79
SYNRG-230ENST00000621605 SLC4A2P04920 1241 aa9.85□□□□□ -0.83
SYNRG-230ENST00000621605 SLC4A1APQ9BWU0 796 aaKnown RBP9.85□□□□□ -0.83
SYNRG-230ENST00000621605 U3KPZ7 1027 aaPredicted RBP9.85□□□□□ -0.83
SYNRG-230ENST00000621605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.76□□□□□ -0.85
SYNRG-230ENST00000621605 HNRNPUL2Q1KMD3 747 aaKnown RBP9.76□□□□□ -0.85
SYNRG-230ENST00000621605 APLP2Q06481 763 aa9.75□□□□□ -0.85
SYNRG-230ENST00000621605 SAMD1Q6SPF0 538 aaPredicted RBP9.69□□□□□ -0.86
SYNRG-230ENST00000621605 CAPN15O75808 1086 aa9.66□□□□□ -0.86
SYNRG-230ENST00000621605 MYCNP04198 464 aaPredicted RBP9.66□□□□□ -0.86
SYNRG-230ENST00000621605 FOXD4L1Q9NU39 408 aa9.65□□□□□ -0.86
SYNRG-230ENST00000621605 SPINK5Q9NQ38 1064 aaPredicted RBP9.64□□□□□ -0.87
SYNRG-230ENST00000621605 DSG3P32926 999 aa9.59□□□□□ -0.87
SYNRG-230ENST00000621605 ZNF219Q9P2Y4 722 aaPredicted RBP9.59□□□□□ -0.87
SYNRG-230ENST00000621605 TRHP20396 242 aaPredicted RBP9.54□□□□□ -0.88
SYNRG-230ENST00000621605 POTEHQ6S545 545 aa9.54□□□□□ -0.88
SYNRG-230ENST00000621605 ZBTB22O15209 634 aa9.47□□□□□ -0.89
SYNRG-230ENST00000621605 ABCB7O75027 752 aa9.4□□□□□ -0.9
SYNRG-230ENST00000621605 ATXN8OSP0DMR3 200 aa9.39□□□□□ -0.91
SYNRG-230ENST00000621605 POLA2Q14181 598 aa9.33□□□□□ -0.92
SYNRG-230ENST00000621605 ATF5Q9Y2D1 282 aaPredicted RBP9.32□□□□□ -0.92
SYNRG-230ENST00000621605 CSRNP3Q8WYN3 585 aa9.24□□□□□ -0.93
SYNRG-230ENST00000621605 ZBTB12Q9Y330 459 aaPredicted RBP9.24□□□□□ -0.93
SYNRG-230ENST00000621605 EHMT2Q96KQ7 1210 aa9.22□□□□□ -0.93
SYNRG-230ENST00000621605 RBM42Q9BTD8 480 aaKnown RBP9.18□□□□□ -0.94
SYNRG-230ENST00000621605 FBLN2P98095 1184 aa9.08□□□□□ -0.96
SYNRG-230ENST00000621605 CHRDL2Q6WN34 429 aa9.05□□□□□ -0.96
SYNRG-230ENST00000621605 OSCARQ8IYS5 282 aa9□□□□□ -0.97
SYNRG-230ENST00000621605 AKT1S1Q96B36 256 aa8.99□□□□□ -0.97
SYNRG-230ENST00000621605 SPDYE2BA6NHP3 402 aa8.94□□□□□ -0.98
SYNRG-230ENST00000621605 SPDYE6P0CI01 402 aa8.94□□□□□ -0.98
SYNRG-230ENST00000621605 SPDYE2Q495Y8 402 aa8.94□□□□□ -0.98
SYNRG-230ENST00000621605 MKRN4PQ13434 485 aaPredicted RBP8.92□□□□□ -0.98
SYNRG-230ENST00000621605 REM2Q8IYK8 340 aaPredicted RBP8.87□□□□□ -0.99
SYNRG-230ENST00000621605 ZNF692Q9BU19 519 aaPredicted RBP8.85□□□□□ -0.99
SYNRG-230ENST00000621605 SP7Q8TDD2 431 aaPredicted RBP8.83□□□□□ -1
SYNRG-230ENST00000621605 PIP4P2Q8N4L2 257 aa8.79□□□□□ -1
SYNRG-230ENST00000621605 SSUH2Q9Y2M2 353 aa8.79□□□□□ -1
SYNRG-230ENST00000621605 PITPNM1O00562 1244 aa8.74□□□□□ -1.01
SYNRG-230ENST00000621605 SPDYE1Q8NFV5 336 aaPredicted RBP8.74□□□□□ -1.01
SYNRG-230ENST00000621605 PABPN1Q86U42 306 aaKnown RBP eCLIP8.7□□□□□ -1.02
SYNRG-230ENST00000621605 FXR2P51116 673 aaKnown RBP eCLIP8.69□□□□□ -1.02
SYNRG-230ENST00000621605 CLEC11AQ9Y240 323 aa8.68□□□□□ -1.02
SYNRG-230ENST00000621605 HAX1O00165 279 aa8.67□□□□□ -1.02
SYNRG-230ENST00000621605 SPDYE4A6NLX3 237 aa8.66□□□□□ -1.02
SYNRG-230ENST00000621605 PRR29P0C7W0 189 aa8.59□□□□□ -1.03
SYNRG-230ENST00000621605 STAG3Q9UJ98 1225 aa8.58□□□□□ -1.04
SYNRG-230ENST00000621605 EVX2Q03828 476 aa8.57□□□□□ -1.04
SYNRG-230ENST00000621605 PRKAR2AP13861 404 aaKnown RBP8.54□□□□□ -1.04
SYNRG-230ENST00000621605 PROM2Q8N271 834 aa8.46□□□□□ -1.06
SYNRG-230ENST00000621605 CHADLQ6NUI6 762 aa8.44□□□□□ -1.06
SYNRG-230ENST00000621605 C19orf67A6NJJ6 358 aa8.43□□□□□ -1.06
SYNRG-230ENST00000621605 FKBP8Q14318 412 aa8.4□□□□□ -1.06
SYNRG-230ENST00000621605 FARP1Q9Y4F1 1045 aaPredicted RBP8.39□□□□□ -1.07
SYNRG-230ENST00000621605 CREBZFQ9NS37 354 aa8.37□□□□□ -1.07
SYNRG-230ENST00000621605 GABBR2O75899 941 aa8.35□□□□□ -1.07
SYNRG-230ENST00000621605 PLEKHG5O94827 1062 aa8.32□□□□□ -1.08
SYNRG-230ENST00000621605 NPM1P06748 294 aaKnown RBP eCLIP8.31□□□□□ -1.08
SYNRG-230ENST00000621605 CD44P16070 742 aaKnown RBP8.29□□□□□ -1.08
SYNRG-230ENST00000621605 LHX8Q68G74 356 aa8.27□□□□□ -1.09
SYNRG-230ENST00000621605 CLCN6P51797 869 aa8.26□□□□□ -1.09
SYNRG-230ENST00000621605 MIER1Q8N108 512 aa8.26□□□□□ -1.09
SYNRG-230ENST00000621605 FBXO3Q9UK99 471 aa8.26□□□□□ -1.09
SYNRG-230ENST00000621605 PAK3O75914 559 aaPredicted RBP8.24□□□□□ -1.09
SYNRG-230ENST00000621605 MNX1P50219 401 aaPredicted RBP8.23□□□□□ -1.09
SYNRG-230ENST00000621605 PLCD3Q8N3E9 789 aa8.22□□□□□ -1.09
SYNRG-230ENST00000621605 ZBTB47Q9UFB7 747 aaPredicted RBP8.21□□□□□ -1.1
SYNRG-230ENST00000621605 ZRANB1Q9UGI0 708 aa8.2□□□□□ -1.1
SYNRG-230ENST00000621605 POTEIP0CG38 1075 aa8.19□□□□□ -1.1
SYNRG-230ENST00000621605 ZNF579Q8NAF0 562 aaKnown RBP8.17□□□□□ -1.1
SYNRG-230ENST00000621605 TSPYL2Q9H2G4 693 aaPredicted RBP8.09□□□□□ -1.11
SYNRG-230ENST00000621605 VASPP50552 380 aaPredicted RBP8.08□□□□□ -1.12
SYNRG-230ENST00000621605 DCBLD2Q96PD2 775 aa8.07□□□□□ -1.12
SYNRG-230ENST00000621605 PHF12Q96QT6 1004 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms