RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 RHODO00212 210 aa11.81□□□□□ -0.52
DKC1-213ENST00000620277 IGHV3-53P01767 116 aa11.81□□□□□ -0.52
DKC1-213ENST00000620277 HOXD3P31249 432 aaPredicted RBP11.81□□□□□ -0.52
DKC1-213ENST00000620277 TCTEX1D4Q5JR98 221 aa11.81□□□□□ -0.52
DKC1-213ENST00000620277 IGLV4-3A0A075B6K6 122 aa11.81□□□□□ -0.52
DKC1-213ENST00000620277 C20orf203Q8NBC4 194 aa11.81□□□□□ -0.52
DKC1-213ENST00000620277 TMEM141Q96I45 108 aa11.81□□□□□ -0.52
DKC1-213ENST00000620277 UBE2D3P61077 147 aa11.8□□□□□ -0.52
DKC1-213ENST00000620277 UBE2D2P62837 147 aa11.8□□□□□ -0.52
DKC1-213ENST00000620277 AMELXQ99217 191 aa11.8□□□□□ -0.52
DKC1-213ENST00000620277 TNFRSF18Q9Y5U5 241 aa11.8□□□□□ -0.52
DKC1-213ENST00000620277 ZNF469Q96JG9 3925 aaPredicted RBP11.8□□□□□ -0.52
DKC1-213ENST00000620277 IGHV3-30-3P0DP02 117 aa11.8□□□□□ -0.52
DKC1-213ENST00000620277 GATA3P23771 443 aa11.8□□□□□ -0.52
DKC1-213ENST00000620277 ADAMTSL4-AS1Q5T5F5 129 aa11.8□□□□□ -0.52
DKC1-213ENST00000620277 UBE2E2Q96LR5 201 aa11.8□□□□□ -0.52
DKC1-213ENST00000620277 TIMM17AQ99595 171 aa11.8□□□□□ -0.52
DKC1-213ENST00000620277 GCN1Q92616 2671 aaKnown RBP11.8□□□□□ -0.52
DKC1-213ENST00000620277 I3L3M4 83 aa11.8□□□□□ -0.52
DKC1-213ENST00000620277 PAPPA-AS1Q5QFB9 102 aa11.8□□□□□ -0.52
DKC1-213ENST00000620277 Q6ZUT4 128 aa11.8□□□□□ -0.52
DKC1-213ENST00000620277 TEX49A0A1B0GTD5 131 aa11.79□□□□□ -0.52
DKC1-213ENST00000620277 A0A1W2PRX2 142 aa11.79□□□□□ -0.52
DKC1-213ENST00000620277 TMEM223A0PJW6 202 aa11.79□□□□□ -0.52
DKC1-213ENST00000620277 NDUFA7O95182 113 aa11.79□□□□□ -0.52
DKC1-213ENST00000620277 CFHR3Q02985 330 aa11.79□□□□□ -0.52
DKC1-213ENST00000620277 TEN1Q86WV5 123 aa11.79□□□□□ -0.52
DKC1-213ENST00000620277 CLEC2BQ92478 149 aa11.79□□□□□ -0.52
DKC1-213ENST00000620277 LGALS9O00182 355 aa11.79□□□□□ -0.52
DKC1-213ENST00000620277 TIMM21Q9BVV7 248 aa11.79□□□□□ -0.52
DKC1-213ENST00000620277 FLNAP21333 2647 aaKnown RBP11.79□□□□□ -0.52
DKC1-213ENST00000620277 PSMB8P28062 276 aa11.78□□□□□ -0.52
DKC1-213ENST00000620277 PPDPFLQ8WWR9 84 aa11.78□□□□□ -0.52
DKC1-213ENST00000620277 SETXQ7Z333 2677 aaKnown RBP11.78□□□□□ -0.52
DKC1-213ENST00000620277 TRBV20-1A0A075B6N2 111 aa11.78□□□□□ -0.52
DKC1-213ENST00000620277 KLK9Q2XQG4 91 aa11.78□□□□□ -0.52
DKC1-213ENST00000620277 PRB1P04280 392 aa11.78□□□□□ -0.52
DKC1-213ENST00000620277 C9orf85Q96MD7 179 aa11.78□□□□□ -0.52
DKC1-213ENST00000620277 IGKV3OR2-268A0A0C4DH90 116 aa11.77□□□□□ -0.53
DKC1-213ENST00000620277 A0A0J9YXY3 114 aa11.77□□□□□ -0.53
DKC1-213ENST00000620277 IGHV3-33P01772 117 aa11.77□□□□□ -0.53
DKC1-213ENST00000620277 MED14OSP0DP75 135 aa11.77□□□□□ -0.53
DKC1-213ENST00000620277 LINC01587Q99440 93 aa11.77□□□□□ -0.53
DKC1-213ENST00000620277 XCL2Q9UBD3 114 aa11.77□□□□□ -0.53
DKC1-213ENST00000620277 K7EQG2 157 aa11.77□□□□□ -0.53
DKC1-213ENST00000620277 B4DSR2 109 aa11.76□□□□□ -0.53
DKC1-213ENST00000620277 NXPH4O95158 308 aa11.76□□□□□ -0.53
DKC1-213ENST00000620277 LEPROTO15243 131 aa11.75□□□□□ -0.53
DKC1-213ENST00000620277 RNF183Q96D59 192 aa11.75□□□□□ -0.53
DKC1-213ENST00000620277 NDUFA12Q9UI09 145 aa11.75□□□□□ -0.53
DKC1-213ENST00000620277 DGAT2L7PQ6IED9 249 aa11.75□□□□□ -0.53
DKC1-213ENST00000620277 TRIAP1O43715 76 aa11.74□□□□□ -0.53
DKC1-213ENST00000620277 CRYBA4P53673 196 aa11.74□□□□□ -0.53
DKC1-213ENST00000620277 LYRM7Q5U5X0 104 aa11.74□□□□□ -0.53
DKC1-213ENST00000620277 CRLF1O75462 422 aa11.74□□□□□ -0.53
DKC1-213ENST00000620277 TMEM263Q8WUH6 116 aaKnown RBP11.74□□□□□ -0.53
DKC1-213ENST00000620277 LINC01619G3V211 115 aa11.73□□□□□ -0.53
DKC1-213ENST00000620277 TMEM61Q8N0U2 210 aa11.73□□□□□ -0.53
DKC1-213ENST00000620277 LINC00467Q9BRT7 94 aa11.73□□□□□ -0.53
DKC1-213ENST00000620277 TRAV13-1A0A0B4J241 112 aa11.73□□□□□ -0.53
DKC1-213ENST00000620277 ITPR3Q14573 2671 aa11.72□□□□□ -0.53
DKC1-213ENST00000620277 RBMY1BA6NDE4 496 aaKnown RBP11.72□□□□□ -0.53
DKC1-213ENST00000620277 RBMY1EA6NEQ0 496 aaKnown RBP11.72□□□□□ -0.53
DKC1-213ENST00000620277 RBMY1DP0C7P1 496 aaKnown RBP11.72□□□□□ -0.53
DKC1-213ENST00000620277 H3BUA1 57 aa11.71□□□□□ -0.53
DKC1-213ENST00000620277 K7EMT4 169 aa11.71□□□□□ -0.53
DKC1-213ENST00000620277 CDKN2A-AS1Q9UH64 79 aa11.71□□□□□ -0.53
DKC1-213ENST00000620277 POM121L12Q8N7R1 296 aa11.71□□□□□ -0.53
DKC1-213ENST00000620277 TRAV4A0A0B4J268 109 aa11.71□□□□□ -0.54
DKC1-213ENST00000620277 ANAPC13Q9BS18 74 aa11.71□□□□□ -0.54
DKC1-213ENST00000620277 TRBV6-5A0A0K0K1A5 114 aa11.7□□□□□ -0.54
DKC1-213ENST00000620277 NSUN5P1Q3KNT7 163 aa11.7□□□□□ -0.54
DKC1-213ENST00000620277 LINC01620Q4KN68 170 aa11.7□□□□□ -0.54
DKC1-213ENST00000620277 TTC32Q5I0X7 151 aa11.7□□□□□ -0.54
DKC1-213ENST00000620277 C3orf56Q8N813 242 aa11.7□□□□□ -0.54
DKC1-213ENST00000620277 RHOHQ15669 191 aa11.69□□□□□ -0.54
DKC1-213ENST00000620277 C2orf82Q6UX34 121 aa11.69□□□□□ -0.54
DKC1-213ENST00000620277 DYNLRB2Q8TF09 96 aa11.69□□□□□ -0.54
DKC1-213ENST00000620277 FAM104AQ969W3 186 aa11.69□□□□□ -0.54
DKC1-213ENST00000620277 TRGV11A0A075B6L2 103 aa11.68□□□□□ -0.54
DKC1-213ENST00000620277 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.68□□□□□ -0.54
DKC1-213ENST00000620277 APCP25054 2843 aa11.68□□□□□ -0.54
DKC1-213ENST00000620277 COX6A2Q02221 97 aa11.68□□□□□ -0.54
DKC1-213ENST00000620277 TEX29Q8N6K0 151 aa11.68□□□□□ -0.54
DKC1-213ENST00000620277 SS18L2Q9UHA2 77 aa11.68□□□□□ -0.54
DKC1-213ENST00000620277 TRGV1A0A0A0MS02 117 aa11.67□□□□□ -0.54
DKC1-213ENST00000620277 PLA2G2AP14555 144 aa11.67□□□□□ -0.54
DKC1-213ENST00000620277 USP24Q9UPU5 2620 aa11.67□□□□□ -0.54
DKC1-213ENST00000620277 TRBV7-9A0A0J9YWB2 115 aa11.67□□□□□ -0.54
DKC1-213ENST00000620277 M0R2P5 195 aa11.67□□□□□ -0.54
DKC1-213ENST00000620277 NBPF19A0A087WUL8 3843 aa11.67□□□□□ -0.54
DKC1-213ENST00000620277 SCGB1A1P11684 91 aa11.66□□□□□ -0.54
DKC1-213ENST00000620277 RPL13AP40429 203 aaKnown RBP11.66□□□□□ -0.54
DKC1-213ENST00000620277 KRTAP10-9P60411 292 aa11.66□□□□□ -0.54
DKC1-213ENST00000620277 H3BMM0 161 aa11.66□□□□□ -0.54
DKC1-213ENST00000620277 ATXN8Q156A1 80 aa11.66□□□□□ -0.54
DKC1-213ENST00000620277 B5MCH6 92 aa11.66□□□□□ -0.54
DKC1-213ENST00000620277 SNCGO76070 127 aa11.66□□□□□ -0.54
DKC1-213ENST00000620277 ZFAND6Q6FIF0 208 aa11.66□□□□□ -0.54
DKC1-213ENST00000620277 LINC00694P0DN24 101 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms