RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 LOXL1Q08397 574 aaPredicted RBP9.67□□□□□ -0.86
TCF4-248ENST00000616053 KPRPQ5T749 579 aaPredicted RBP9.67□□□□□ -0.86
TCF4-248ENST00000616053 Q6ZR03 302 aa9.67□□□□□ -0.86
TCF4-248ENST00000616053 MUC6Q6W4X9 2439 aa9.67□□□□□ -0.86
TCF4-248ENST00000616053 TMEM89A2RUT3 159 aa9.66□□□□□ -0.86
TCF4-248ENST00000616053 DCANP1Q8TF63 244 aa9.66□□□□□ -0.86
TCF4-248ENST00000616053 RNF185Q96GF1 192 aa9.66□□□□□ -0.86
TCF4-248ENST00000616053 CYYR1Q96J86 154 aa9.66□□□□□ -0.86
TCF4-248ENST00000616053 FAM229AH3BQW9 127 aa9.66□□□□□ -0.86
TCF4-248ENST00000616053 CCKP06307 115 aa9.66□□□□□ -0.86
TCF4-248ENST00000616053 MIAQ16674 131 aa9.66□□□□□ -0.86
TCF4-248ENST00000616053 K7EMT4 169 aa9.66□□□□□ -0.86
TCF4-248ENST00000616053 RPL39P62891 51 aaKnown RBP9.66□□□□□ -0.86
TCF4-248ENST00000616053 CLEC2BQ92478 149 aa9.66□□□□□ -0.86
TCF4-248ENST00000616053 NCOR1P1Q9H4R4 102 aa9.66□□□□□ -0.86
TCF4-248ENST00000616053 U3KQK5 164 aa9.66□□□□□ -0.86
TCF4-248ENST00000616053 ESRGQ1W209 222 aa9.65□□□□□ -0.86
TCF4-248ENST00000616053 K7EP13 123 aa9.65□□□□□ -0.86
TCF4-248ENST00000616053 CSDC2Q9Y534 153 aaKnown RBP9.65□□□□□ -0.86
TCF4-248ENST00000616053 COX6B2Q6YFQ2 88 aa9.65□□□□□ -0.86
TCF4-248ENST00000616053 ADORA2A-AS1P86434 159 aa9.65□□□□□ -0.86
TCF4-248ENST00000616053 PLA2G2CQ5R387 149 aa9.65□□□□□ -0.86
TCF4-248ENST00000616053 MYO18BQ8IUG5 2567 aa9.65□□□□□ -0.86
TCF4-248ENST00000616053 A0A087WV48 116 aa9.65□□□□□ -0.87
TCF4-248ENST00000616053 DHRS4-AS1Q9P1J3 65 aa9.65□□□□□ -0.87
TCF4-248ENST00000616053 WISP3O95389 354 aaPredicted RBP9.65□□□□□ -0.87
TCF4-248ENST00000616053 FXYD5Q96DB9 178 aa9.64□□□□□ -0.87
TCF4-248ENST00000616053 V9GYV3 84 aa9.64□□□□□ -0.87
TCF4-248ENST00000616053 NANOS2P60321 138 aaKnown RBP9.64□□□□□ -0.87
TCF4-248ENST00000616053 A0A0U1RQV1 116 aa9.64□□□□□ -0.87
TCF4-248ENST00000616053 LST1O00453 97 aa9.64□□□□□ -0.87
TCF4-248ENST00000616053 Q6ZTI0 123 aa9.64□□□□□ -0.87
TCF4-248ENST00000616053 PIP4P1Q86T03 277 aa9.63□□□□□ -0.87
TCF4-248ENST00000616053 FLVCR1-AS1Q8TAF5 88 aa9.63□□□□□ -0.87
TCF4-248ENST00000616053 ZFAND3Q9H8U3 227 aa9.63□□□□□ -0.87
TCF4-248ENST00000616053 TRPM3Q9HCF6 1732 aaPredicted RBP9.63□□□□□ -0.87
TCF4-248ENST00000616053 C1orf137Q5JT78 98 aa9.63□□□□□ -0.87
TCF4-248ENST00000616053 MT-ATP8P03928 68 aa9.62□□□□□ -0.87
TCF4-248ENST00000616053 PLXNA4Q9HCM2 1894 aa9.62□□□□□ -0.87
TCF4-248ENST00000616053 Q6ZRM9 215 aa9.62□□□□□ -0.87
TCF4-248ENST00000616053 IGLV4-69A0A075B6H9 119 aa9.62□□□□□ -0.87
TCF4-248ENST00000616053 ZNF581Q9P0T4 197 aa9.62□□□□□ -0.87
TCF4-248ENST00000616053 LINC01556Q5JQF7 62 aa9.61□□□□□ -0.87
TCF4-248ENST00000616053 XGP55808 180 aa9.61□□□□□ -0.87
TCF4-248ENST00000616053 ATRAIDQ6UW56 229 aa9.61□□□□□ -0.87
TCF4-248ENST00000616053 IGLV1-44P01699 117 aa9.61□□□□□ -0.87
TCF4-248ENST00000616053 IGHV6-1A0A0B4J1U7 121 aa9.6□□□□□ -0.87
TCF4-248ENST00000616053 TRBV7-6A0A0J9YX20 115 aa9.6□□□□□ -0.87
TCF4-248ENST00000616053 TMEM223A0PJW6 202 aa9.6□□□□□ -0.87
TCF4-248ENST00000616053 COL22A1Q8NFW1 1626 aaPredicted RBP9.6□□□□□ -0.87
TCF4-248ENST00000616053 LOC100131303A0A0U1RQF7 123 aa9.6□□□□□ -0.87
TCF4-248ENST00000616053 MDFICQ9P1T7 246 aa9.6□□□□□ -0.87
TCF4-248ENST00000616053 Q6ZSR3 168 aa9.6□□□□□ -0.87
TCF4-248ENST00000616053 CSPG4Q6UVK1 2322 aa9.59□□□□□ -0.87
TCF4-248ENST00000616053 Q6ZS49 121 aa9.59□□□□□ -0.87
TCF4-248ENST00000616053 Q6ZUT4 128 aa9.59□□□□□ -0.87
TCF4-248ENST00000616053 PYY3Q5JQD4 70 aa9.59□□□□□ -0.87
TCF4-248ENST00000616053 C17orf82Q86X59 251 aaPredicted RBP9.59□□□□□ -0.87
TCF4-248ENST00000616053 LIMD2Q9BT23 127 aa9.59□□□□□ -0.87
TCF4-248ENST00000616053 TNS1Q9HBL0 1735 aaKnown RBP9.59□□□□□ -0.88
TCF4-248ENST00000616053 C19orf71A6NCJ1 209 aa9.58□□□□□ -0.88
TCF4-248ENST00000616053 C20orf197Q8N268 126 aa9.58□□□□□ -0.88
TCF4-248ENST00000616053 NDUFC2-KCTD14E9PQ53 114 aa9.58□□□□□ -0.88
TCF4-248ENST00000616053 OXLD1Q5BKU9 147 aa9.58□□□□□ -0.88
TCF4-248ENST00000616053 FAM30AQ9NZY2 134 aa9.58□□□□□ -0.88
TCF4-248ENST00000616053 M0QXV9 152 aa9.57□□□□□ -0.88
TCF4-248ENST00000616053 ACYP2P14621 99 aa9.57□□□□□ -0.88
TCF4-248ENST00000616053 NHSL1Q5SYE7 1610 aa9.57□□□□□ -0.88
TCF4-248ENST00000616053 C2orf48Q96LS8 159 aa9.57□□□□□ -0.88
TCF4-248ENST00000616053 MARF1Q9Y4F3 1742 aaKnown RBP9.57□□□□□ -0.88
TCF4-248ENST00000616053 MSRB1Q9NZV6 116 aa9.56□□□□□ -0.88
TCF4-248ENST00000616053 ENHOQ6UWT2 76 aa9.56□□□□□ -0.88
TCF4-248ENST00000616053 CACNA1AO00555 2505 aa9.56□□□□□ -0.88
TCF4-248ENST00000616053 FRMD6-AS1P0C7T7 363 aa9.56□□□□□ -0.88
TCF4-248ENST00000616053 CEMP1Q6PRD7 247 aaPredicted RBP9.56□□□□□ -0.88
TCF4-248ENST00000616053 CLUHP3Q96NS8 147 aa9.56□□□□□ -0.88
TCF4-248ENST00000616053 IGLV11-55A0A075B6I3 123 aa9.55□□□□□ -0.88
TCF4-248ENST00000616053 A0A0J9YX75 114 aa9.55□□□□□ -0.88
TCF4-248ENST00000616053 C15orf65H3BRN8 121 aa9.55□□□□□ -0.88
TCF4-248ENST00000616053 DEFB1P60022 68 aa9.55□□□□□ -0.88
TCF4-248ENST00000616053 Q6YL49 198 aa9.55□□□□□ -0.88
TCF4-248ENST00000616053 H7C423 109 aa9.55□□□□□ -0.88
TCF4-248ENST00000616053 M0R378 163 aa9.55□□□□□ -0.88
TCF4-248ENST00000616053 PRLHP81277 87 aa9.55□□□□□ -0.88
TCF4-248ENST00000616053 PIK3CD-AS1Q5SR53 167 aa9.55□□□□□ -0.88
TCF4-248ENST00000616053 TDRG1Q3Y452 100 aa9.55□□□□□ -0.88
TCF4-248ENST00000616053 BBC3Q96PG8 261 aaPredicted RBP9.54□□□□□ -0.88
TCF4-248ENST00000616053 FAM19A3Q7Z5A8 133 aa9.54□□□□□ -0.88
TCF4-248ENST00000616053 FOXL2NBQ6ZUU3 175 aa9.54□□□□□ -0.88
TCF4-248ENST00000616053 LINC00526Q96FQ7 95 aa9.53□□□□□ -0.88
TCF4-248ENST00000616053 PRORYQ9H606 182 aa9.53□□□□□ -0.88
TCF4-248ENST00000616053 hDV103S1A0JD37 113 aa9.53□□□□□ -0.88
TCF4-248ENST00000616053 LY75O60449 1722 aa9.53□□□□□ -0.88
TCF4-248ENST00000616053 DEFB114Q30KQ6 69 aa9.53□□□□□ -0.88
TCF4-248ENST00000616053 REG3GQ6UW15 175 aa9.53□□□□□ -0.88
TCF4-248ENST00000616053 F8P00451 2351 aa9.52□□□□□ -0.89
TCF4-248ENST00000616053 A0A1B0GXF2 115 aa9.52□□□□□ -0.89
TCF4-248ENST00000616053 TRBV6-8A0A0A6YYG3 113 aa9.52□□□□□ -0.89
TCF4-248ENST00000616053 TNFRSF13BO14836 293 aaPredicted RBP9.52□□□□□ -0.89
TCF4-248ENST00000616053 SDIM1Q6ZPB5 146 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 176.2 ms