RNA–Protein interactions for RNA: ENST00000615587.4

LRRC41-206, Transcript of leucine rich repeat containing 41, humanhuman

TSL 1 (best) BASIC

Gene LRRC41, Length 2,842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-206ENST00000615587 ZFHX2Q9C0A1 2572 aaPredicted RBP9.55□□□□□ -0.88
LRRC41-206ENST00000615587 IGHV1-58A0A0C4DH39 117 aa9.55□□□□□ -0.88
LRRC41-206ENST00000615587 IGKV3D-7A0A0C4DH55 119 aa9.55□□□□□ -0.88
LRRC41-206ENST00000615587 FAM104AQ969W3 186 aa9.55□□□□□ -0.88
LRRC41-206ENST00000615587 A0A087WVE0 104 aa9.54□□□□□ -0.88
LRRC41-206ENST00000615587 MED14OSP0DP75 135 aa9.54□□□□□ -0.88
LRRC41-206ENST00000615587 COL12A1Q99715 3063 aa9.54□□□□□ -0.88
LRRC41-206ENST00000615587 IGHV3-73A0A0B4J1V6 119 aa9.54□□□□□ -0.88
LRRC41-206ENST00000615587 ODF3BA8MYP8 253 aa9.54□□□□□ -0.88
LRRC41-206ENST00000615587 IGKV3-20P01619 116 aa9.54□□□□□ -0.88
LRRC41-206ENST00000615587 Q9HAA7 133 aa9.54□□□□□ -0.88
LRRC41-206ENST00000615587 C22orf24Q9Y442 160 aa9.54□□□□□ -0.88
LRRC41-206ENST00000615587 PTPRQQ9UMZ3 2332 aa9.54□□□□□ -0.88
LRRC41-206ENST00000615587 WIPF1O43516 503 aa9.53□□□□□ -0.88
LRRC41-206ENST00000615587 RPS28P62857 69 aaKnown RBP9.53□□□□□ -0.88
LRRC41-206ENST00000615587 LY6G5BQ8NDX9 201 aa9.53□□□□□ -0.88
LRRC41-206ENST00000615587 F5H768 121 aa9.53□□□□□ -0.88
LRRC41-206ENST00000615587 VSIG2Q96IQ7 327 aa9.53□□□□□ -0.88
LRRC41-206ENST00000615587 PEMTQ9UBM1 199 aa9.53□□□□□ -0.88
LRRC41-206ENST00000615587 TRAV12-2A0A075B6T6 113 aa9.52□□□□□ -0.88
LRRC41-206ENST00000615587 TRBV6-5A0A0K0K1A5 114 aa9.52□□□□□ -0.88
LRRC41-206ENST00000615587 FAM218AQ96MZ4 157 aa9.52□□□□□ -0.88
LRRC41-206ENST00000615587 HOXD3P31249 432 aaPredicted RBP9.52□□□□□ -0.89
LRRC41-206ENST00000615587 FAM19A4Q96LR4 140 aa9.52□□□□□ -0.89
LRRC41-206ENST00000615587 KLK9Q9UKQ9 250 aa9.52□□□□□ -0.89
LRRC41-206ENST00000615587 CEP295Q9C0D2 2601 aa9.52□□□□□ -0.89
LRRC41-206ENST00000615587 COL6A6A6NMZ7 2263 aa9.52□□□□□ -0.89
LRRC41-206ENST00000615587 ATP5G1P05496 136 aa9.51□□□□□ -0.89
LRRC41-206ENST00000615587 IGF2-ASQ6U949 168 aa9.51□□□□□ -0.89
LRRC41-206ENST00000615587 SOCS3O14543 225 aa9.51□□□□□ -0.89
LRRC41-206ENST00000615587 Q9UF83 564 aa9.51□□□□□ -0.89
LRRC41-206ENST00000615587 ZNF292O60281 2723 aa9.51□□□□□ -0.89
LRRC41-206ENST00000615587 COX7A2LO14548 114 aa9.5□□□□□ -0.89
LRRC41-206ENST00000615587 MRPS36P82909 103 aaKnown RBP9.5□□□□□ -0.89
LRRC41-206ENST00000615587 IGHV3OR16-10A0A075B7F0 116 aa9.5□□□□□ -0.89
LRRC41-206ENST00000615587 ATOX1O00244 68 aa9.5□□□□□ -0.89
LRRC41-206ENST00000615587 CXCL5P42830 114 aa9.5□□□□□ -0.89
LRRC41-206ENST00000615587 PROK1P58294 105 aa9.5□□□□□ -0.89
LRRC41-206ENST00000615587 CUBNO60494 3623 aa9.5□□□□□ -0.89
LRRC41-206ENST00000615587 EDN2P20800 178 aa9.5□□□□□ -0.89
LRRC41-206ENST00000615587 C9orf129Q5T035 196 aaKnown RBP9.5□□□□□ -0.89
LRRC41-206ENST00000615587 IGHV3-11P01762 117 aa9.49□□□□□ -0.89
LRRC41-206ENST00000615587 HIST1H4AP62805 103 aaKnown RBP9.49□□□□□ -0.89
LRRC41-206ENST00000615587 ANKHD1Q8IWZ3 2542 aaKnown RBP9.49□□□□□ -0.89
LRRC41-206ENST00000615587 Q5XG85 94 aa9.49□□□□□ -0.89
LRRC41-206ENST00000615587 DEFB123Q8N688 67 aa9.49□□□□□ -0.89
LRRC41-206ENST00000615587 TLN1Q9Y490 2541 aaKnown RBP9.48□□□□□ -0.89
LRRC41-206ENST00000615587 IGHG2P01859 326 aa9.48□□□□□ -0.89
LRRC41-206ENST00000615587 BEAN1Q3B7T3 259 aa9.48□□□□□ -0.89
LRRC41-206ENST00000615587 LINC00308Q8TCZ7 52 aa9.48□□□□□ -0.89
LRRC41-206ENST00000615587 C10orf105Q8TEF2 133 aa9.48□□□□□ -0.89
LRRC41-206ENST00000615587 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.48□□□□□ -0.89
LRRC41-206ENST00000615587 B9A039 149 aa9.48□□□□□ -0.89
LRRC41-206ENST00000615587 RPL18AQ02543 176 aaKnown RBP9.48□□□□□ -0.89
LRRC41-206ENST00000615587 MINOS1Q5TGZ0 78 aa9.47□□□□□ -0.89
LRRC41-206ENST00000615587 SOSTDC1Q6X4U4 206 aa9.47□□□□□ -0.89
LRRC41-206ENST00000615587 CDKN2A-AS1Q9UH64 79 aa9.47□□□□□ -0.89
LRRC41-206ENST00000615587 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.47□□□□□ -0.89
LRRC41-206ENST00000615587 IGKV2-29A2NJV5 120 aaPredicted RBP9.47□□□□□ -0.89
LRRC41-206ENST00000615587 APRG1Q8IVJ8 170 aa9.47□□□□□ -0.89
LRRC41-206ENST00000615587 DEFB124Q8NES8 71 aa9.47□□□□□ -0.89
LRRC41-206ENST00000615587 LINC01560Q8TB33 94 aa9.47□□□□□ -0.89
LRRC41-206ENST00000615587 SPTAN1Q13813 2472 aaKnown RBP9.47□□□□□ -0.89
LRRC41-206ENST00000615587 KLLNB2CW77 178 aa9.46□□□□□ -0.89
LRRC41-206ENST00000615587 HTN1P15515 57 aa9.46□□□□□ -0.89
LRRC41-206ENST00000615587 PLA2G2CQ5R387 149 aa9.46□□□□□ -0.89
LRRC41-206ENST00000615587 C14orf132Q9NPU4 83 aa9.46□□□□□ -0.89
LRRC41-206ENST00000615587 IGHV3-16A0A0C4DH30 117 aa9.46□□□□□ -0.9
LRRC41-206ENST00000615587 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.46□□□□□ -0.9
LRRC41-206ENST00000615587 UPK3BQ9BT76 320 aa9.46□□□□□ -0.9
LRRC41-206ENST00000615587 MAP1AP78559 2803 aaPredicted RBP9.46□□□□□ -0.9
LRRC41-206ENST00000615587 HRNRQ86YZ3 2850 aaPredicted RBP9.46□□□□□ -0.9
LRRC41-206ENST00000615587 TMEM258P61165 79 aa9.46□□□□□ -0.9
LRRC41-206ENST00000615587 Q9H8V8 135 aa9.45□□□□□ -0.9
LRRC41-206ENST00000615587 ZFP36P26651 326 aaKnown RBP9.45□□□□□ -0.9
LRRC41-206ENST00000615587 SERP2Q8N6R1 65 aa9.45□□□□□ -0.9
LRRC41-206ENST00000615587 KNCNA6PVL3 124 aa9.44□□□□□ -0.9
LRRC41-206ENST00000615587 LINC01561Q8N1V8 128 aa9.44□□□□□ -0.9
LRRC41-206ENST00000615587 RHPN1-AS1Q9BWJ2 59 aa9.44□□□□□ -0.9
LRRC41-206ENST00000615587 LINC00846Q9NV44 126 aa9.44□□□□□ -0.9
LRRC41-206ENST00000615587 PYGO1Q9Y3Y4 419 aa9.44□□□□□ -0.9
LRRC41-206ENST00000615587 CREBBPQ92793 2442 aa9.43□□□□□ -0.9
LRRC41-206ENST00000615587 IGHV3-38A0A0C4DH36 116 aa9.43□□□□□ -0.9
LRRC41-206ENST00000615587 TINCRA0A1B0GVN0 87 aa9.43□□□□□ -0.9
LRRC41-206ENST00000615587 PRM2P04554 102 aa9.43□□□□□ -0.9
LRRC41-206ENST00000615587 C9orf85Q96MD7 179 aa9.43□□□□□ -0.9
LRRC41-206ENST00000615587 DNAL4O96015 105 aa9.43□□□□□ -0.9
LRRC41-206ENST00000615587 MALP21145 153 aa9.43□□□□□ -0.9
LRRC41-206ENST00000615587 USP17L23D6RBM5 183 aa9.42□□□□□ -0.9
LRRC41-206ENST00000615587 COX6A2Q02221 97 aa9.42□□□□□ -0.9
LRRC41-206ENST00000615587 CIRBPQ14011 172 aaKnown RBP9.42□□□□□ -0.9
LRRC41-206ENST00000615587 PIK3CD-AS1Q5SR53 167 aa9.42□□□□□ -0.9
LRRC41-206ENST00000615587 PRIMA1Q86XR5 153 aa9.42□□□□□ -0.9
LRRC41-206ENST00000615587 DOPEY2Q9Y3R5 2298 aa9.42□□□□□ -0.9
LRRC41-206ENST00000615587 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.42□□□□□ -0.93e-9■■■■□ 20.1
LRRC41-206ENST00000615587 INAFM2P0DMQ5 153 aa9.42□□□□□ -0.9
LRRC41-206ENST00000615587 SYNJ2BPP57105 145 aa9.42□□□□□ -0.9
LRRC41-206ENST00000615587 FHL2Q14192 279 aa9.42□□□□□ -0.9
LRRC41-206ENST00000615587 ATRXP46100 2492 aa9.42□□□□□ -0.9
LRRC41-206ENST00000615587 SPINK13Q1W4C9 94 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms