RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 C5orf47Q569G3 176 aa11.06□□□□□ -0.64
SNPH-203ENST00000614659 RNF183Q96D59 192 aa11.06□□□□□ -0.64
SNPH-203ENST00000614659 C20orf173Q96LM9 149 aa11.06□□□□□ -0.64
SNPH-203ENST00000614659 IGHV4-4A0A075B6R2 117 aa11.05□□□□□ -0.64
SNPH-203ENST00000614659 C5orf38Q86SI9 138 aa11.05□□□□□ -0.64
SNPH-203ENST00000614659 MIAQ16674 131 aa11.05□□□□□ -0.64
SNPH-203ENST00000614659 PTH2Q96A98 100 aa11.05□□□□□ -0.64
SNPH-203ENST00000614659 ZFAND2AQ8N6M9 145 aa11.05□□□□□ -0.64
SNPH-203ENST00000614659 TRBV6-5A0A0K0K1A5 114 aa11.04□□□□□ -0.64
SNPH-203ENST00000614659 TCL1BO95988 128 aa11.04□□□□□ -0.64
SNPH-203ENST00000614659 LINC00643Q86TS7 51 aa11.04□□□□□ -0.64
SNPH-203ENST00000614659 IGHV3-30-3P0DP02 117 aa11.04□□□□□ -0.64
SNPH-203ENST00000614659 ZNF702PQ9H963 129 aa11.04□□□□□ -0.64
SNPH-203ENST00000614659 LINC01006Q8NI28 216 aa11.04□□□□□ -0.64
SNPH-203ENST00000614659 CAMK2N2Q96S95 79 aa11.04□□□□□ -0.64
SNPH-203ENST00000614659 DAND5Q8N907 189 aa11.04□□□□□ -0.64
SNPH-203ENST00000614659 DEFB105AQ8NG35 78 aa11.03□□□□□ -0.64
SNPH-203ENST00000614659 CNFNQ9BYD5 112 aa11.03□□□□□ -0.64
SNPH-203ENST00000614659 NDUFV3P56181 108 aaKnown RBP11.03□□□□□ -0.64
SNPH-203ENST00000614659 DEFB1P60022 68 aa11.02□□□□□ -0.64
SNPH-203ENST00000614659 MED12LQ86YW9 2145 aa11.02□□□□□ -0.64
SNPH-203ENST00000614659 IGHV3-30P01768 117 aa11.02□□□□□ -0.65
SNPH-203ENST00000614659 IGHV3-33P01772 117 aa11.02□□□□□ -0.65
SNPH-203ENST00000614659 IGHV3-30-5P0DP03 117 aa11.02□□□□□ -0.65
SNPH-203ENST00000614659 ANKHD1Q8IWZ3 2542 aaKnown RBP11.02□□□□□ -0.65
SNPH-203ENST00000614659 LECT2O14960 151 aa11.02□□□□□ -0.65
SNPH-203ENST00000614659 TIRAPP58753 221 aa11.02□□□□□ -0.65
SNPH-203ENST00000614659 A0A0J9YXY3 114 aa11.01□□□□□ -0.65
SNPH-203ENST00000614659 WFDC9Q8NEX5 89 aa11.01□□□□□ -0.65
SNPH-203ENST00000614659 MP68P56378 58 aa11.01□□□□□ -0.65
SNPH-203ENST00000614659 RBX1P62877 108 aa11.01□□□□□ -0.65
SNPH-203ENST00000614659 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.01□□□□□ -0.65
SNPH-203ENST00000614659 CHD3Q12873 2000 aaKnown RBP11.01□□□□□ -0.65
SNPH-203ENST00000614659 MT-ATP8P03928 68 aa11.01□□□□□ -0.65
SNPH-203ENST00000614659 TMEM223A0PJW6 202 aa11□□□□□ -0.65
SNPH-203ENST00000614659 NREPQ16612 68 aa11□□□□□ -0.65
SNPH-203ENST00000614659 NFE4Q86UQ8 179 aa11□□□□□ -0.65
SNPH-203ENST00000614659 PYGO1Q9Y3Y4 419 aa11□□□□□ -0.65
SNPH-203ENST00000614659 NDUFS5O43920 106 aa11□□□□□ -0.65
SNPH-203ENST00000614659 KIR2DL5BQ8NHK3 375 aa10.99□□□□□ -0.65
SNPH-203ENST00000614659 NDUFA1O15239 70 aa10.99□□□□□ -0.65
SNPH-203ENST00000614659 TRAV10A0A0B4J240 114 aa10.99□□□□□ -0.65
SNPH-203ENST00000614659 TRBV27A0A0K0K1C4 114 aa10.99□□□□□ -0.65
SNPH-203ENST00000614659 RPL18AQ02543 176 aaKnown RBP10.99□□□□□ -0.65
SNPH-203ENST00000614659 NRACQ8N912 160 aa10.99□□□□□ -0.65
SNPH-203ENST00000614659 ETDCA0A1B0GVM5 59 aa10.98□□□□□ -0.65
SNPH-203ENST00000614659 M0QY20 66 aa10.98□□□□□ -0.65
SNPH-203ENST00000614659 PIK3CD-AS1Q5SR53 167 aa10.98□□□□□ -0.65
SNPH-203ENST00000614659 MRPS12O15235 138 aaKnown RBP10.97□□□□□ -0.65
SNPH-203ENST00000614659 CRIP2P52943 208 aaPredicted RBP10.97□□□□□ -0.65
SNPH-203ENST00000614659 COX8CQ7Z4L0 72 aa10.97□□□□□ -0.65
SNPH-203ENST00000614659 TMEM256-PLSCR3K7ERE1 68 aa10.97□□□□□ -0.65
SNPH-203ENST00000614659 UQCRQO14949 82 aa10.97□□□□□ -0.65
SNPH-203ENST00000614659 KLLNB2CW77 178 aa10.97□□□□□ -0.65
SNPH-203ENST00000614659 IGLV1-40P01703 118 aa10.97□□□□□ -0.65
SNPH-203ENST00000614659 IGLV4-3A0A075B6K6 122 aa10.97□□□□□ -0.65
SNPH-203ENST00000614659 TP73-AS1Q9UF72 201 aa10.97□□□□□ -0.65
SNPH-203ENST00000614659 DEFB131BA0A096LNP1 70 aa10.96□□□□□ -0.65
SNPH-203ENST00000614659 BRI3O95415 125 aa10.96□□□□□ -0.65
SNPH-203ENST00000614659 ZNF22P17026 224 aaPredicted RBP10.96□□□□□ -0.65
SNPH-203ENST00000614659 P0DMU3 169 aa10.96□□□□□ -0.66
SNPH-203ENST00000614659 FAM231AP0DMU4 169 aa10.96□□□□□ -0.66
SNPH-203ENST00000614659 FAM231CP0DMU5 169 aa10.96□□□□□ -0.66
SNPH-203ENST00000614659 IGHV4-28A0A0C4DH34 117 aa10.95□□□□□ -0.66
SNPH-203ENST00000614659 TIMM17BO60830 172 aa10.95□□□□□ -0.66
SNPH-203ENST00000614659 ARHGAP21Q5T5U3 1957 aa10.95□□□□□ -0.66
SNPH-203ENST00000614659 NCR3O14931 201 aa10.95□□□□□ -0.66
SNPH-203ENST00000614659 PDE6GP18545 87 aa10.95□□□□□ -0.66
SNPH-203ENST00000614659 EXPH5Q8NEV8 1989 aa10.95□□□□□ -0.66
SNPH-203ENST00000614659 MIR7-3HGQ8N6C7 128 aa10.94□□□□□ -0.66
SNPH-203ENST00000614659 C16orf95Q9H693 158 aa10.94□□□□□ -0.66
SNPH-203ENST00000614659 ARFGEF3Q5TH69 2177 aa10.94□□□□□ -0.66
SNPH-203ENST00000614659 COL4A2P08572 1712 aa10.94□□□□□ -0.66
SNPH-203ENST00000614659 DSCAMO60469 2012 aa10.94□□□□□ -0.66
SNPH-203ENST00000614659 C14orf132Q9NPU4 83 aa10.94□□□□□ -0.66
SNPH-203ENST00000614659 C9orf85Q96MD7 179 aa10.94□□□□□ -0.66
SNPH-203ENST00000614659 DEFB4AO15263 64 aa10.93□□□□□ -0.66
SNPH-203ENST00000614659 CFAP126Q5VTH2 177 aa10.93□□□□□ -0.66
SNPH-203ENST00000614659 C2orf91Q6ZV80 131 aa10.93□□□□□ -0.66
SNPH-203ENST00000614659 BRK1Q8WUW1 75 aa10.93□□□□□ -0.66
SNPH-203ENST00000614659 LINC00310P59036 64 aa10.93□□□□□ -0.66
SNPH-203ENST00000614659 ZNF580Q9UK33 172 aa10.93□□□□□ -0.66
SNPH-203ENST00000614659 ABCA1O95477 2261 aa10.93□□□□□ -0.66
SNPH-203ENST00000614659 FAM222AQ5U5X8 452 aa10.93□□□□□ -0.66
SNPH-203ENST00000614659 RNASE3P12724 160 aaKnown RBP10.92□□□□□ -0.66
SNPH-203ENST00000614659 TEX49A0A1B0GTD5 131 aa10.92□□□□□ -0.66
SNPH-203ENST00000614659 CDSNQ15517 529 aa10.92□□□□□ -0.66
SNPH-203ENST00000614659 C3orf22Q8N5N4 141 aa10.92□□□□□ -0.66
SNPH-203ENST00000614659 IGLV10-54A0A075B6I4 117 aa10.92□□□□□ -0.66
SNPH-203ENST00000614659 CHKB-CPT1BH3BT56 60 aa10.92□□□□□ -0.66
SNPH-203ENST00000614659 HIST2H2BDQ6DRA6 164 aa10.92□□□□□ -0.66
SNPH-203ENST00000614659 LINC00467Q9BRT7 94 aa10.92□□□□□ -0.66
SNPH-203ENST00000614659 TRBV30A0A0K0K1B3 111 aa10.91□□□□□ -0.66
SNPH-203ENST00000614659 DIRC1Q969H9 104 aa10.91□□□□□ -0.66
SNPH-203ENST00000614659 ESM1Q9NQ30 184 aa10.91□□□□□ -0.66
SNPH-203ENST00000614659 TNRC6BQ9UPQ9 1833 aaKnown RBP10.91□□□□□ -0.66
SNPH-203ENST00000614659 DOPEY2Q9Y3R5 2298 aa10.91□□□□□ -0.66
SNPH-203ENST00000614659 IGKV2D-26A0A0A0MRZ7 120 aa10.91□□□□□ -0.66
SNPH-203ENST00000614659 NDUFB1O75438 58 aa10.91□□□□□ -0.66
SNPH-203ENST00000614659 TRBV6-4A0A1B0GX49 114 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms