RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 PHLDA1Q8WV24 401 aaPredicted RBP8.69□□□□□ -1.02
CBWD1-220ENST00000612045 GAGE12JA6NER3 117 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 LINC01549A6NIU2 74 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.68□□□□□ -1.02
CBWD1-220ENST00000612045 DAD1P61803 113 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 GAGE1Q13065 139 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 GAGE4Q13068 117 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 GAGE5Q13069 117 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 GAGE13Q4V321 117 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 ERASQ7Z444 233 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 ATOH7Q8N100 152 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 HHLA3Q9XRX5 114 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 PRSS1P07477 247 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 UBE2D3P61077 147 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 UBE2D2P62837 147 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 LGALS9CQ6DKI2 356 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 DAZ4Q86SG3 579 aaKnown RBP8.68□□□□□ -1.02
CBWD1-220ENST00000612045 SBSPONQ8IVN8 264 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 C20orf203Q8NBC4 194 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 PMCHL2Q9BQD1 86 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 PRADC1Q9BSG0 188 aa8.68□□□□□ -1.02
CBWD1-220ENST00000612045 DAZ3Q9NR90 486 aaKnown RBP8.68□□□□□ -1.02
CBWD1-220ENST00000612045 LOC100131303A0A0U1RQF7 123 aa8.67□□□□□ -1.02
CBWD1-220ENST00000612045 COTL1Q14019 142 aa8.67□□□□□ -1.02
CBWD1-220ENST00000612045 Q6ZN92 141 aa8.67□□□□□ -1.02
CBWD1-220ENST00000612045 ZMAT4Q9H898 229 aa8.67□□□□□ -1.02
CBWD1-220ENST00000612045 IGIPA6NJ69 53 aa8.66□□□□□ -1.02
CBWD1-220ENST00000612045 DEFB121Q5J5C9 76 aa8.66□□□□□ -1.02
CBWD1-220ENST00000612045 ZNF664Q8N3J9 261 aa8.66□□□□□ -1.02
CBWD1-220ENST00000612045 VAMP8Q9BV40 100 aa8.66□□□□□ -1.02
CBWD1-220ENST00000612045 TENM3Q9P273 2699 aa8.66□□□□□ -1.02
CBWD1-220ENST00000612045 TEX48A0A1B0GUV7 120 aa8.66□□□□□ -1.02
CBWD1-220ENST00000612045 CRYBA4P53673 196 aa8.66□□□□□ -1.02
CBWD1-220ENST00000612045 TIMM17AQ99595 171 aa8.66□□□□□ -1.02
CBWD1-220ENST00000612045 CHCHD7Q9BUK0 85 aa8.66□□□□□ -1.02
CBWD1-220ENST00000612045 PRO0255Q9UI72 69 aa8.66□□□□□ -1.02
CBWD1-220ENST00000612045 PAM16Q9Y3D7 125 aa8.66□□□□□ -1.02
CBWD1-220ENST00000612045 ATP5G1P05496 136 aa8.65□□□□□ -1.02
CBWD1-220ENST00000612045 ODF1Q14990 250 aa8.65□□□□□ -1.02
CBWD1-220ENST00000612045 BAALCQ8WXS3 180 aa8.65□□□□□ -1.02
CBWD1-220ENST00000612045 TMEM141Q96I45 108 aa8.65□□□□□ -1.02
CBWD1-220ENST00000612045 C11orf68Q9H3H3 251 aaKnown RBP8.65□□□□□ -1.02
CBWD1-220ENST00000612045 PCP4L1A6NKN8 68 aa8.64□□□□□ -1.03
CBWD1-220ENST00000612045 LINC00694P0DN24 101 aa8.64□□□□□ -1.03
CBWD1-220ENST00000612045 MAJINQ3KP22 176 aa8.64□□□□□ -1.03
CBWD1-220ENST00000612045 TRAV9-2A0A087WT02 112 aa8.64□□□□□ -1.03
CBWD1-220ENST00000612045 TRAV12-1A0A0B4J245 112 aa8.64□□□□□ -1.03
CBWD1-220ENST00000612045 SPATA25Q9BR10 227 aa8.64□□□□□ -1.03
CBWD1-220ENST00000612045 TM2D3Q9BRN9 247 aa8.64□□□□□ -1.03
CBWD1-220ENST00000612045 PRO1933Q9H354 126 aa8.64□□□□□ -1.03
CBWD1-220ENST00000612045 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.63□□□□□ -1.03
CBWD1-220ENST00000612045 A0A087WX48 190 aa8.63□□□□□ -1.03
CBWD1-220ENST00000612045 IGKV2-29A2NJV5 120 aaPredicted RBP8.63□□□□□ -1.03
CBWD1-220ENST00000612045 PAX4O43316 350 aa8.63□□□□□ -1.03
CBWD1-220ENST00000612045 GYPEP15421 78 aa8.63□□□□□ -1.03
CBWD1-220ENST00000612045 PKIAP61925 76 aa8.63□□□□□ -1.03
CBWD1-220ENST00000612045 C12orf74Q32Q52 190 aa8.63□□□□□ -1.03
CBWD1-220ENST00000612045 NTM-AS1Q6ZSK4 140 aa8.63□□□□□ -1.03
CBWD1-220ENST00000612045 MRAPQ8TCY5 172 aa8.63□□□□□ -1.03
CBWD1-220ENST00000612045 SPATA45Q537H7 98 aa8.62□□□□□ -1.03
CBWD1-220ENST00000612045 GTSF1LQ9H1H1 148 aa8.62□□□□□ -1.03
CBWD1-220ENST00000612045 MRPL35Q9NZE8 188 aaKnown RBP8.62□□□□□ -1.03
CBWD1-220ENST00000612045 PYGO1Q9Y3Y4 419 aa8.62□□□□□ -1.03
CBWD1-220ENST00000612045 A0A0J9YWU9 116 aa8.61□□□□□ -1.03
CBWD1-220ENST00000612045 PRSS29PA6NIE9 313 aa8.61□□□□□ -1.03
CBWD1-220ENST00000612045 F5H768 121 aa8.61□□□□□ -1.03
CBWD1-220ENST00000612045 TSTD3H0UI37 97 aa8.61□□□□□ -1.03
CBWD1-220ENST00000612045 VSIG2Q96IQ7 327 aa8.61□□□□□ -1.03
CBWD1-220ENST00000612045 OPRPNQ99935 248 aaPredicted RBP8.61□□□□□ -1.03
CBWD1-220ENST00000612045 TRAV26-1A0A087WT03 109 aa8.61□□□□□ -1.03
CBWD1-220ENST00000612045 A0A0J9YY99 117 aa8.61□□□□□ -1.03
CBWD1-220ENST00000612045 hDV102S1A0JD36 115 aa8.61□□□□□ -1.03
CBWD1-220ENST00000612045 LCE2BO14633 110 aa8.61□□□□□ -1.03
CBWD1-220ENST00000612045 HTN3P15516 51 aa8.61□□□□□ -1.03
CBWD1-220ENST00000612045 ZC2HC1BQ5TFG8 222 aa8.61□□□□□ -1.03
CBWD1-220ENST00000612045 UBE2D4Q9Y2X8 147 aa8.61□□□□□ -1.03
CBWD1-220ENST00000612045 IGLV4-3A0A075B6K6 122 aa8.6□□□□□ -1.03
CBWD1-220ENST00000612045 HSBP1L1C9JCN9 74 aa8.6□□□□□ -1.03
CBWD1-220ENST00000612045 F8VRH5 84 aa8.6□□□□□ -1.03
CBWD1-220ENST00000612045 DPM2O94777 84 aa8.6□□□□□ -1.03
CBWD1-220ENST00000612045 IGKCP01834 107 aa8.6□□□□□ -1.03
CBWD1-220ENST00000612045 PMVKQ15126 192 aa8.6□□□□□ -1.03
CBWD1-220ENST00000612045 CEMP1Q6PRD7 247 aaPredicted RBP8.6□□□□□ -1.03
CBWD1-220ENST00000612045 CST9LQ9H4G1 147 aa8.6□□□□□ -1.03
CBWD1-220ENST00000612045 SPANXA1Q9NS26 97 aa8.6□□□□□ -1.03
CBWD1-220ENST00000612045 CHTOPQ9Y3Y2 248 aaKnown RBP8.6□□□□□ -1.03
CBWD1-220ENST00000612045 NPSP0C0P6 89 aa8.59□□□□□ -1.03
CBWD1-220ENST00000612045 ATP6V0E2Q8NHE4 81 aa8.59□□□□□ -1.03
CBWD1-220ENST00000612045 FAM104AQ969W3 186 aa8.59□□□□□ -1.03
CBWD1-220ENST00000612045 TRBV25-1A0A075B6N4 114 aa8.59□□□□□ -1.03
CBWD1-220ENST00000612045 TRBV6-8A0A0A6YYG3 113 aa8.59□□□□□ -1.03
CBWD1-220ENST00000612045 KRTAP21-3Q3LHN1 58 aa8.59□□□□□ -1.03
CBWD1-220ENST00000612045 PAPPA-AS1Q5QFB9 102 aa8.59□□□□□ -1.03
CBWD1-220ENST00000612045 TMEM243Q9BU79 118 aa8.59□□□□□ -1.03
CBWD1-220ENST00000612045 PLNP26678 52 aa8.58□□□□□ -1.04
CBWD1-220ENST00000612045 TMEM97Q5BJF2 176 aa8.58□□□□□ -1.04
CBWD1-220ENST00000612045 Q6ZTC4 211 aa8.58□□□□□ -1.04
CBWD1-220ENST00000612045 TIMM21Q9BVV7 248 aa8.58□□□□□ -1.04
CBWD1-220ENST00000612045 VCX2Q9H322 139 aa8.58□□□□□ -1.04
CBWD1-220ENST00000612045 FGF6P10767 208 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms