RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 C16orf74Q96GX8 76 aa9.8□□□□□ -0.84
TCF3-220ENST00000611869 S100A7L2Q5SY68 101 aa9.79□□□□□ -0.84
TCF3-220ENST00000611869 NXPH4O95158 308 aa9.79□□□□□ -0.84
TCF3-220ENST00000611869 TSPAN13O95857 204 aa9.79□□□□□ -0.84
TCF3-220ENST00000611869 TRBV20-1A0A075B6N2 111 aa9.79□□□□□ -0.84
TCF3-220ENST00000611869 KLLNB2CW77 178 aa9.79□□□□□ -0.84
TCF3-220ENST00000611869 Q6ZTI0 123 aa9.79□□□□□ -0.84
TCF3-220ENST00000611869 BBC3Q96PG8 261 aaPredicted RBP9.79□□□□□ -0.84
TCF3-220ENST00000611869 DEFB4AO15263 64 aa9.78□□□□□ -0.84
TCF3-220ENST00000611869 PROK1P58294 105 aa9.78□□□□□ -0.84
TCF3-220ENST00000611869 C5orf38Q86SI9 138 aa9.78□□□□□ -0.84
TCF3-220ENST00000611869 CNFNQ9BYD5 112 aa9.78□□□□□ -0.84
TCF3-220ENST00000611869 A4D1N5 150 aa9.78□□□□□ -0.84
TCF3-220ENST00000611869 ANGP03950 147 aaKnown RBP9.78□□□□□ -0.84
TCF3-220ENST00000611869 XCL1P47992 114 aa9.78□□□□□ -0.84
TCF3-220ENST00000611869 TRAV8-4A0A0B4J246 113 aa9.77□□□□□ -0.84
TCF3-220ENST00000611869 GYPEP15421 78 aa9.77□□□□□ -0.84
TCF3-220ENST00000611869 F8W1H4 67 aa9.77□□□□□ -0.85
TCF3-220ENST00000611869 CRLF1O75462 422 aa9.77□□□□□ -0.85
TCF3-220ENST00000611869 CRIP2P52943 208 aaPredicted RBP9.77□□□□□ -0.85
TCF3-220ENST00000611869 M0QY20 66 aa9.76□□□□□ -0.85
TCF3-220ENST00000611869 MUSTN1Q8IVN3 82 aa9.76□□□□□ -0.85
TCF3-220ENST00000611869 DAND5Q8N907 189 aa9.76□□□□□ -0.85
TCF3-220ENST00000611869 NEXN-AS1Q8NBZ9 246 aa9.76□□□□□ -0.85
TCF3-220ENST00000611869 AKAP13Q12802 2813 aa9.76□□□□□ -0.85
TCF3-220ENST00000611869 C9orf66Q5T8R8 295 aa9.76□□□□□ -0.85
TCF3-220ENST00000611869 DEFB135Q30KP9 77 aa9.76□□□□□ -0.85
TCF3-220ENST00000611869 TMEM263Q8WUH6 116 aaKnown RBP9.76□□□□□ -0.85
TCF3-220ENST00000611869 CFC1BP0CG36 223 aa9.76□□□□□ -0.85
TCF3-220ENST00000611869 CFC1P0CG37 223 aa9.76□□□□□ -0.85
TCF3-220ENST00000611869 DAZ2Q13117 558 aaKnown RBP9.76□□□□□ -0.85
TCF3-220ENST00000611869 DAZ4Q86SG3 579 aaKnown RBP9.76□□□□□ -0.85
TCF3-220ENST00000611869 DAZ3Q9NR90 486 aaKnown RBP9.76□□□□□ -0.85
TCF3-220ENST00000611869 AGRNO00468 2067 aa9.76□□□□□ -0.85
TCF3-220ENST00000611869 SCGB1A1P11684 91 aa9.75□□□□□ -0.85
TCF3-220ENST00000611869 Q6ZUT4 128 aa9.75□□□□□ -0.85
TCF3-220ENST00000611869 SH2D6Q7Z4S9 175 aa9.75□□□□□ -0.85
TCF3-220ENST00000611869 MAPKAPK5-AS1Q8N8E1 139 aa9.75□□□□□ -0.85
TCF3-220ENST00000611869 FRYLO94915 3013 aa9.75□□□□□ -0.85
TCF3-220ENST00000611869 RNASE8Q8TDE3 154 aaKnown RBP9.75□□□□□ -0.85
TCF3-220ENST00000611869 DPH3Q96FX2 82 aa9.75□□□□□ -0.85
TCF3-220ENST00000611869 FLNBO75369 2602 aaKnown RBP9.74□□□□□ -0.85
TCF3-220ENST00000611869 ATP6V0E2Q8NHE4 81 aa9.74□□□□□ -0.85
TCF3-220ENST00000611869 SPTBN5Q9NRC6 3674 aaKnown RBP9.74□□□□□ -0.85
TCF3-220ENST00000611869 LINC01006Q8NI28 216 aa9.74□□□□□ -0.85
TCF3-220ENST00000611869 IGHV4-4A0A075B6R2 117 aa9.74□□□□□ -0.85
TCF3-220ENST00000611869 MAP1AP78559 2803 aaPredicted RBP9.73□□□□□ -0.85
TCF3-220ENST00000611869 WFDC10AQ9H1F0 79 aa9.73□□□□□ -0.85
TCF3-220ENST00000611869 IGLV10-54A0A075B6I4 117 aa9.72□□□□□ -0.85
TCF3-220ENST00000611869 TEX48A0A1B0GUV7 120 aa9.72□□□□□ -0.85
TCF3-220ENST00000611869 IGHV3-30-3P0DP02 117 aa9.72□□□□□ -0.85
TCF3-220ENST00000611869 C10orf126Q8N4M7 172 aa9.72□□□□□ -0.85
TCF3-220ENST00000611869 INAFM1C9JVW0 142 aa9.72□□□□□ -0.85
TCF3-220ENST00000611869 SLC25A20O43772 301 aa9.72□□□□□ -0.85
TCF3-220ENST00000611869 COX8CQ7Z4L0 72 aa9.72□□□□□ -0.85
TCF3-220ENST00000611869 HHLA3Q9XRX5 114 aa9.72□□□□□ -0.85
TCF3-220ENST00000611869 SLC25A29Q8N8R3 303 aa9.72□□□□□ -0.85
TCF3-220ENST00000611869 CRYGDP07320 174 aa9.72□□□□□ -0.85
TCF3-220ENST00000611869 WFDC2Q14508 124 aa9.72□□□□□ -0.85
TCF3-220ENST00000611869 C2orf91Q6ZV80 131 aa9.72□□□□□ -0.85
TCF3-220ENST00000611869 VSIG2Q96IQ7 327 aa9.71□□□□□ -0.85
TCF3-220ENST00000611869 TRBV27A0A0K0K1C4 114 aa9.71□□□□□ -0.86
TCF3-220ENST00000611869 LINC00467Q9BRT7 94 aa9.71□□□□□ -0.86
TCF3-220ENST00000611869 CFAP126Q5VTH2 177 aa9.71□□□□□ -0.86
TCF3-220ENST00000611869 PPDPFLQ8WWR9 84 aa9.71□□□□□ -0.86
TCF3-220ENST00000611869 A0A096LNJ9 63 aa9.7□□□□□ -0.86
TCF3-220ENST00000611869 HECTD1Q9ULT8 2610 aa9.7□□□□□ -0.86
TCF3-220ENST00000611869 IGLV4-3A0A075B6K6 122 aa9.7□□□□□ -0.86
TCF3-220ENST00000611869 POLR2KP53803 58 aaKnown RBP9.7□□□□□ -0.86
TCF3-220ENST00000611869 PRSS47A8MTI9 375 aa9.7□□□□□ -0.86
TCF3-220ENST00000611869 SOCS3O14543 225 aa9.7□□□□□ -0.86
TCF3-220ENST00000611869 TRBV10-1A0A0K0K1A3 114 aa9.7□□□□□ -0.86
TCF3-220ENST00000611869 C9orf85Q96MD7 179 aa9.7□□□□□ -0.86
TCF3-220ENST00000611869 TRAV4A0A0B4J268 109 aa9.69□□□□□ -0.86
TCF3-220ENST00000611869 IGHV1-58A0A0C4DH39 117 aa9.69□□□□□ -0.86
TCF3-220ENST00000611869 COL27A1Q8IZC6 1860 aaPredicted RBP9.69□□□□□ -0.86
TCF3-220ENST00000611869 GAGE2BQ13066 116 aa9.69□□□□□ -0.86
TCF3-220ENST00000611869 GAGE2EQ4V326 116 aa9.69□□□□□ -0.86
TCF3-220ENST00000611869 SMR3AQ99954 134 aa9.69□□□□□ -0.86
TCF3-220ENST00000611869 GAGE2DQ9UEU5 116 aa9.69□□□□□ -0.86
TCF3-220ENST00000611869 ATP5G1P05496 136 aa9.68□□□□□ -0.86
TCF3-220ENST00000611869 NTN5Q8WTR8 489 aaPredicted RBP9.68□□□□□ -0.86
TCF3-220ENST00000611869 UBE2WQ96B02 151 aa9.68□□□□□ -0.86
TCF3-220ENST00000611869 TRBV6-5A0A0K0K1A5 114 aa9.68□□□□□ -0.86
TCF3-220ENST00000611869 ZNF561-AS1K7EIQ3 104 aa9.68□□□□□ -0.86
TCF3-220ENST00000611869 ZNF22P17026 224 aaPredicted RBP9.68□□□□□ -0.86
TCF3-220ENST00000611869 CARD19Q96LW7 228 aa9.68□□□□□ -0.86
TCF3-220ENST00000611869 CDKN2A-AS1Q9UH64 79 aa9.68□□□□□ -0.86
TCF3-220ENST00000611869 SPART-AS1P0CW21 52 aa9.67□□□□□ -0.86
TCF3-220ENST00000611869 FREM2Q5SZK8 3169 aa9.67□□□□□ -0.86
TCF3-220ENST00000611869 FRYQ5TBA9 3013 aa9.67□□□□□ -0.86
TCF3-220ENST00000611869 LINC00482Q8N8I6 264 aa9.67□□□□□ -0.86
TCF3-220ENST00000611869 NBEAQ8NFP9 2946 aa9.67□□□□□ -0.86
TCF3-220ENST00000611869 BRI3O95415 125 aa9.66□□□□□ -0.86
TCF3-220ENST00000611869 TSHBP01222 138 aa9.66□□□□□ -0.86
TCF3-220ENST00000611869 BOD1L1Q8NFC6 3051 aa9.66□□□□□ -0.86
TCF3-220ENST00000611869 TM2D2Q9BX73 214 aa9.66□□□□□ -0.86
TCF3-220ENST00000611869 IFITM1P13164 125 aa9.66□□□□□ -0.86
TCF3-220ENST00000611869 ODF3L2Q3SX64 289 aa9.66□□□□□ -0.86
TCF3-220ENST00000611869 MRAPQ8TCY5 172 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms