RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.46□□□□□ -1.86
HDDC2-208ENST00000609021 TMEM61Q8N0U2 210 aa3.46□□□□□ -1.86
HDDC2-208ENST00000609021 C8orf49Q96NF6 230 aa3.46□□□□□ -1.86
HDDC2-208ENST00000609021 RELNP78509 3460 aa3.46□□□□□ -1.86
HDDC2-208ENST00000609021 PRB1P04280 392 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 COX14Q96I36 57 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 SPTA1P02549 2419 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 NOTCH2Q04721 2471 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 CACNA1HO95180 2353 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 KALRNO60229 2985 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 PRRC2AP48634 2157 aaKnown RBP3.45□□□□□ -1.86
HDDC2-208ENST00000609021 A0A0J9YXY3 114 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 PROP1O75360 226 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 IGLV3-19P01714 112 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 SUMO2P61956 95 aaKnown RBP3.45□□□□□ -1.86
HDDC2-208ENST00000609021 FLVCR1-AS1Q8TAF5 88 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 MSRB1Q9NZV6 116 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 FAM30AQ9NZY2 134 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 CELA1Q9UNI1 258 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 MUC4Q99102 2169 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 TET2Q6N021 2002 aaPredicted RBP3.45□□□□□ -1.86
HDDC2-208ENST00000609021 SPTAN1Q13813 2472 aaKnown RBP3.45□□□□□ -1.86
HDDC2-208ENST00000609021 IGLV2-14P01704 120 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 LIMD2Q9BT23 127 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 TMEM14CQ9P0S9 112 aa3.45□□□□□ -1.86
HDDC2-208ENST00000609021 DEFB108AA8MXU0 73 aa3.44□□□□□ -1.86
HDDC2-208ENST00000609021 RNASE4P34096 147 aaKnown RBP3.44□□□□□ -1.86
HDDC2-208ENST00000609021 NREPQ16612 68 aa3.44□□□□□ -1.86
HDDC2-208ENST00000609021 Q6ZRP5 223 aa3.44□□□□□ -1.86
HDDC2-208ENST00000609021 C16orf90A8MZG2 172 aa3.44□□□□□ -1.86
HDDC2-208ENST00000609021 JMJD7-PLA2G4BH0Y9G9 81 aa3.44□□□□□ -1.86
HDDC2-208ENST00000609021 GYPEP15421 78 aa3.44□□□□□ -1.86
HDDC2-208ENST00000609021 BSPH1Q075Z2 132 aa3.44□□□□□ -1.86
HDDC2-208ENST00000609021 MIAQ16674 131 aa3.44□□□□□ -1.86
HDDC2-208ENST00000609021 RETNLBQ9BQ08 111 aa3.44□□□□□ -1.86
HDDC2-208ENST00000609021 MGPP08493 103 aa3.44□□□□□ -1.86
HDDC2-208ENST00000609021 FOXL2NBQ6ZUU3 175 aa3.44□□□□□ -1.86
HDDC2-208ENST00000609021 LYPD1Q8N2G4 141 aa3.44□□□□□ -1.86
HDDC2-208ENST00000609021 RNF185Q96GF1 192 aa3.44□□□□□ -1.86
HDDC2-208ENST00000609021 IGKV1OR2-108A0A075B7D4 117 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 TSPEAR-AS2P59090 65 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 LYZP61626 148 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 C9orf116Q5BN46 136 aaPredicted RBP3.43□□□□□ -1.86
HDDC2-208ENST00000609021 PRR15LQ9BU68 103 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 CYP4F30PQ9H0H9 118 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 AHCTF1Q8WYP5 2266 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 FAM186AA6NE01 2351 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 IGHV3-43A0A0B4J1X8 118 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 A0A0J9YX75 114 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 TRBV6-1A0A0K0K1D8 114 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 hDV103S1A0JD37 113 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 RNASE1P07998 156 aaKnown RBP3.43□□□□□ -1.86
HDDC2-208ENST00000609021 IGHV3-43DP0DP04 118 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 CD59P13987 128 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 PRB3Q04118 309 aaPredicted RBP3.43□□□□□ -1.86
HDDC2-208ENST00000609021 Q6ZSV7 163 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 ABCA1O95477 2261 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 GAS8-AS1O95177 125 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 PRB2P02812 416 aaPredicted RBP3.43□□□□□ -1.86
HDDC2-208ENST00000609021 Q8N3U1 123 aa3.43□□□□□ -1.86
HDDC2-208ENST00000609021 KLF14Q8TD94 323 aaPredicted RBP3.43□□□□□ -1.86
HDDC2-208ENST00000609021 MRPL36Q9P0J6 103 aaKnown RBP3.43□□□□□ -1.86
HDDC2-208ENST00000609021 FASNP49327 2511 aaKnown RBP3.42□□□□□ -1.86
HDDC2-208ENST00000609021 H0YGX0 51 aa3.42□□□□□ -1.86
HDDC2-208ENST00000609021 NCR3O14931 201 aa3.42□□□□□ -1.86
HDDC2-208ENST00000609021 EIF4EBP3O60516 100 aaPredicted RBP3.42□□□□□ -1.86
HDDC2-208ENST00000609021 WISP2O76076 250 aa3.42□□□□□ -1.86
HDDC2-208ENST00000609021 IGHV3-48P01763 117 aa3.42□□□□□ -1.86
HDDC2-208ENST00000609021 SAA1P0DJI8 122 aaPredicted RBP3.42□□□□□ -1.86
HDDC2-208ENST00000609021 TFF2Q03403 129 aa3.42□□□□□ -1.86
HDDC2-208ENST00000609021 ZNF491Q8N8L2 437 aa3.42□□□□□ -1.86
HDDC2-208ENST00000609021 ICE1Q9Y2F5 2266 aa3.42□□□□□ -1.86
HDDC2-208ENST00000609021 ATMQ13315 3056 aa3.42□□□□□ -1.86
HDDC2-208ENST00000609021 IGLV2-18A0A075B6J9 118 aa3.42□□□□□ -1.86
HDDC2-208ENST00000609021 TRAV10A0A0B4J240 114 aa3.42□□□□□ -1.86
HDDC2-208ENST00000609021 ATP1A1-AS1Q5TC04 95 aa3.42□□□□□ -1.86
HDDC2-208ENST00000609021 PATE2Q6UY27 113 aa3.42□□□□□ -1.86
HDDC2-208ENST00000609021 CASC2Q6XLA1 102 aa3.42□□□□□ -1.86
HDDC2-208ENST00000609021 C11orf72Q8NBR9 251 aa3.42□□□□□ -1.86
HDDC2-208ENST00000609021 ORMDL1Q9P0S3 153 aa3.42□□□□□ -1.86
HDDC2-208ENST00000609021 TRBV6-8A0A0A6YYG3 113 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 LOC100131303A0A0U1RQF7 123 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 A6NN06 94 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 ERC2-IT1O76042 136 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 TRGV3P03979 118 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 IGHV1-8P0DP01 117 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 MED14OSP0DP75 135 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 PRCDQ00LT1 54 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 EIF4EBP1Q13541 118 aaPredicted RBP3.41□□□□□ -1.86
HDDC2-208ENST00000609021 LY6G5CQ5SRR4 150 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 Q8IYB0 196 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 LINC00337Q8N6G1 96 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 CRPP02741 224 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 C19orf54Q5BKX5 351 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 AKAP9Q99996 3911 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 A0A0J9YXV3 536 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 ZNF503-AS2A6NEH8 195 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 GNLYP22749 145 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 CRIP1P50238 77 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 LCE2AQ5TA79 106 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms