RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 TRAV8-3A0A0A6YYJ7 113 aa9.16□□□□□ -0.94
MSH6-212ENST00000607272 IGHV4-61A0A0C4DH41 118 aa9.16□□□□□ -0.94
MSH6-212ENST00000607272 TINCRA0A1B0GVN0 87 aa9.16□□□□□ -0.94
MSH6-212ENST00000607272 H7C423 109 aa9.16□□□□□ -0.94
MSH6-212ENST00000607272 PSMB8P28062 276 aa9.16□□□□□ -0.94
MSH6-212ENST00000607272 ADAMTSL4-AS1Q5T5F5 129 aa9.16□□□□□ -0.94
MSH6-212ENST00000607272 FAM104AQ969W3 186 aa9.16□□□□□ -0.94
MSH6-212ENST00000607272 VSIG2Q96IQ7 327 aa9.16□□□□□ -0.94
MSH6-212ENST00000607272 YAE1D1Q9NRH1 226 aa9.16□□□□□ -0.94
MSH6-212ENST00000607272 ABCA2Q9BZC7 2435 aa9.16□□□□□ -0.94
MSH6-212ENST00000607272 MRPL23Q16540 153 aaKnown RBP9.16□□□□□ -0.94
MSH6-212ENST00000607272 TNFRSF18Q9Y5U5 241 aa9.16□□□□□ -0.94
MSH6-212ENST00000607272 HIVEP3Q5T1R4 2406 aa9.16□□□□□ -0.94
MSH6-212ENST00000607272 GAGE12JA6NER3 117 aa9.15□□□□□ -0.94
MSH6-212ENST00000607272 GAGE7O76087 117 aa9.15□□□□□ -0.94
MSH6-212ENST00000607272 GAGE12FP0CL80 117 aa9.15□□□□□ -0.94
MSH6-212ENST00000607272 GAGE12GP0CL81 117 aa9.15□□□□□ -0.94
MSH6-212ENST00000607272 GAGE12IP0CL82 117 aa9.15□□□□□ -0.94
MSH6-212ENST00000607272 GAGE4Q13068 117 aa9.15□□□□□ -0.94
MSH6-212ENST00000607272 C15orf53Q8NAA6 179 aa9.15□□□□□ -0.94
MSH6-212ENST00000607272 SPANXA1Q9NS26 97 aa9.15□□□□□ -0.94
MSH6-212ENST00000607272 PRRC2AP48634 2157 aaKnown RBP9.15□□□□□ -0.95
MSH6-212ENST00000607272 B5MCH6 92 aa9.15□□□□□ -0.95
MSH6-212ENST00000607272 H3BS24 57 aa9.15□□□□□ -0.95
MSH6-212ENST00000607272 FAM240AA0A1B0GVK7 77 aa9.14□□□□□ -0.95
MSH6-212ENST00000607272 TIMM17BO60830 172 aa9.14□□□□□ -0.95
MSH6-212ENST00000607272 SS18L2Q9UHA2 77 aa9.14□□□□□ -0.95
MSH6-212ENST00000607272 IGF2RP11717 2491 aa9.14□□□□□ -0.95
MSH6-212ENST00000607272 TMEM89A2RUT3 159 aa9.13□□□□□ -0.95
MSH6-212ENST00000607272 LST1O00453 97 aa9.13□□□□□ -0.95
MSH6-212ENST00000607272 TMEM61Q8N0U2 210 aa9.13□□□□□ -0.95
MSH6-212ENST00000607272 CEMP1Q6PRD7 247 aaPredicted RBP9.13□□□□□ -0.95
MSH6-212ENST00000607272 C10orf105Q8TEF2 133 aa9.13□□□□□ -0.95
MSH6-212ENST00000607272 IGHV3-73A0A0B4J1V6 119 aa9.12□□□□□ -0.95
MSH6-212ENST00000607272 DEFB121Q5J5C9 76 aa9.12□□□□□ -0.95
MSH6-212ENST00000607272 PIK3CD-AS1Q5SR53 167 aa9.12□□□□□ -0.95
MSH6-212ENST00000607272 CELSR1Q9NYQ6 3014 aa9.12□□□□□ -0.95
MSH6-212ENST00000607272 UBE2D4Q9Y2X8 147 aa9.12□□□□□ -0.95
MSH6-212ENST00000607272 MSMBP08118 114 aa9.11□□□□□ -0.95
MSH6-212ENST00000607272 RNASE13Q5GAN3 156 aaKnown RBP9.11□□□□□ -0.95
MSH6-212ENST00000607272 DOPEY2Q9Y3R5 2298 aa9.11□□□□□ -0.95
MSH6-212ENST00000607272 PROK1P58294 105 aa9.11□□□□□ -0.95
MSH6-212ENST00000607272 CLEC2BQ92478 149 aa9.11□□□□□ -0.95
MSH6-212ENST00000607272 CHCHD7Q9BUK0 85 aa9.11□□□□□ -0.95
MSH6-212ENST00000607272 SYNJ2BPP57105 145 aa9.1□□□□□ -0.95
MSH6-212ENST00000607272 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.1□□□□□ -0.95
MSH6-212ENST00000607272 C19orf84I3L1E1 186 aa9.09□□□□□ -0.95
MSH6-212ENST00000607272 HTN1P15515 57 aa9.09□□□□□ -0.95
MSH6-212ENST00000607272 NPC2P61916 151 aa9.09□□□□□ -0.95
MSH6-212ENST00000607272 CIRBPQ14011 172 aaKnown RBP9.09□□□□□ -0.95
MSH6-212ENST00000607272 SORL1Q92673 2214 aa9.09□□□□□ -0.95
MSH6-212ENST00000607272 VPS13CQ709C8 3753 aa9.09□□□□□ -0.95
MSH6-212ENST00000607272 A8MZ25 164 aa9.09□□□□□ -0.95
MSH6-212ENST00000607272 RBMY1A1P0DJD3 496 aaKnown RBP9.09□□□□□ -0.95
MSH6-212ENST00000607272 RBMY1CP0DJD4 496 aa9.09□□□□□ -0.95
MSH6-212ENST00000607272 RBMY1FQ15415 496 aaKnown RBP9.09□□□□□ -0.95
MSH6-212ENST00000607272 Q6ZSV7 163 aa9.09□□□□□ -0.95
MSH6-212ENST00000607272 CCDC179H3BU77 68 aa9.08□□□□□ -0.96
MSH6-212ENST00000607272 NDUFA1O15239 70 aa9.08□□□□□ -0.96
MSH6-212ENST00000607272 TIRAPP58753 221 aa9.08□□□□□ -0.96
MSH6-212ENST00000607272 DNAJC30Q96LL9 226 aa9.08□□□□□ -0.96
MSH6-212ENST00000607272 CCL19Q99731 98 aa9.08□□□□□ -0.96
MSH6-212ENST00000607272 CREBBPQ92793 2442 aa9.08□□□□□ -0.96
MSH6-212ENST00000607272 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.08□□□□□ -0.96
MSH6-212ENST00000607272 IGKV2-29A2NJV5 120 aaPredicted RBP9.08□□□□□ -0.96
MSH6-212ENST00000607272 C10orf99Q6UWK7 81 aa9.08□□□□□ -0.96
MSH6-212ENST00000607272 DUX3Q96PT4 197 aa9.08□□□□□ -0.96
MSH6-212ENST00000607272 IGLV5-45A0A087WSX0 123 aa9.07□□□□□ -0.96
MSH6-212ENST00000607272 LINC00467Q9BRT7 94 aa9.07□□□□□ -0.96
MSH6-212ENST00000607272 CDKN2A-AS1Q9UH64 79 aa9.07□□□□□ -0.96
MSH6-212ENST00000607272 IGHV4-30-2A0A087WSY4 118 aa9.07□□□□□ -0.96
MSH6-212ENST00000607272 KNCNA6PVL3 124 aa9.07□□□□□ -0.96
MSH6-212ENST00000607272 ZNF415Q09FC8 603 aa9.07□□□□□ -0.96
MSH6-212ENST00000607272 Q6ZSN1 163 aa9.07□□□□□ -0.96
MSH6-212ENST00000607272 COPS9Q8WXC6 57 aa9.07□□□□□ -0.96
MSH6-212ENST00000607272 TMEM101Q96IK0 257 aa9.07□□□□□ -0.96
MSH6-212ENST00000607272 COL12A1Q99715 3063 aa9.06□□□□□ -0.96
MSH6-212ENST00000607272 A8MTW9 85 aa9.06□□□□□ -0.96
MSH6-212ENST00000607272 B4DSR2 109 aa9.06□□□□□ -0.96
MSH6-212ENST00000607272 ACYP1P07311 99 aa9.06□□□□□ -0.96
MSH6-212ENST00000607272 Q9UF83 564 aa9.06□□□□□ -0.96
MSH6-212ENST00000607272 TRBV7-7A0A0K0K1E9 115 aa9.05□□□□□ -0.96
MSH6-212ENST00000607272 IGHV3-53P01767 116 aa9.05□□□□□ -0.96
MSH6-212ENST00000607272 IGHV4-59P01825 116 aa9.05□□□□□ -0.96
MSH6-212ENST00000607272 HOXD3P31249 432 aaPredicted RBP9.05□□□□□ -0.96
MSH6-212ENST00000607272 ATP5J2P56134 94 aa9.05□□□□□ -0.96
MSH6-212ENST00000607272 CITED2Q99967 270 aaPredicted RBP9.05□□□□□ -0.96
MSH6-212ENST00000607272 DAND5Q8N907 189 aa9.05□□□□□ -0.96
MSH6-212ENST00000607272 DEFB131AP59861 70 aa9.04□□□□□ -0.96
MSH6-212ENST00000607272 DGAT2L7PQ6IED9 249 aa9.04□□□□□ -0.96
MSH6-212ENST00000607272 LINC00308Q8TCZ7 52 aa9.04□□□□□ -0.96
MSH6-212ENST00000607272 DUX5Q96PT3 197 aa9.04□□□□□ -0.96
MSH6-212ENST00000607272 PRORYQ9H606 182 aa9.04□□□□□ -0.96
MSH6-212ENST00000607272 CSPG4Q6UVK1 2322 aa9.04□□□□□ -0.96
MSH6-212ENST00000607272 COX7A2LO14548 114 aa9.04□□□□□ -0.96
MSH6-212ENST00000607272 HERVK_113P63121 156 aa9.04□□□□□ -0.96
MSH6-212ENST00000607272 UBE2E2Q96LR5 201 aa9.04□□□□□ -0.96
MSH6-212ENST00000607272 IGLV5-39A0A0G2JS06 123 aa9.03□□□□□ -0.96
MSH6-212ENST00000607272 DEFB112Q30KQ8 113 aa9.03□□□□□ -0.96
MSH6-212ENST00000607272 IMUPQ9GZP8 106 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms