RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 LINC00173Q6ZV60 143 aa9.7□□□□□ -0.86
IRF3-229ENST00000601373 SPATA12Q7Z6I5 190 aa9.7□□□□□ -0.86
IRF3-229ENST00000601373 DAZ4Q86SG3 579 aaKnown RBP9.7□□□□□ -0.86
IRF3-229ENST00000601373 ZNF664Q8N3J9 261 aa9.7□□□□□ -0.86
IRF3-229ENST00000601373 ZNRF2Q8NHG8 242 aa9.7□□□□□ -0.86
IRF3-229ENST00000601373 DAZ3Q9NR90 486 aaKnown RBP9.7□□□□□ -0.86
IRF3-229ENST00000601373 CYSLTR1Q9Y271 337 aa9.7□□□□□ -0.86
IRF3-229ENST00000601373 SPATA25Q9BR10 227 aa9.69□□□□□ -0.86
IRF3-229ENST00000601373 C11orf68Q9H3H3 251 aaKnown RBP9.69□□□□□ -0.86
IRF3-229ENST00000601373 HHLA3Q9XRX5 114 aa9.69□□□□□ -0.86
IRF3-229ENST00000601373 KMT2CQ8NEZ4 4911 aaKnown RBP9.68□□□□□ -0.86
IRF3-229ENST00000601373 ATP5G1P05496 136 aa9.68□□□□□ -0.86
IRF3-229ENST00000601373 UBE2D3P61077 147 aa9.68□□□□□ -0.86
IRF3-229ENST00000601373 UBE2D2P62837 147 aa9.68□□□□□ -0.86
IRF3-229ENST00000601373 COTL1Q14019 142 aa9.68□□□□□ -0.86
IRF3-229ENST00000601373 SBSPONQ8IVN8 264 aa9.68□□□□□ -0.86
IRF3-229ENST00000601373 Q8N976 141 aa9.68□□□□□ -0.86
IRF3-229ENST00000601373 SCGB3A1Q96QR1 104 aa9.68□□□□□ -0.86
IRF3-229ENST00000601373 Q9UF83 564 aa9.68□□□□□ -0.86
IRF3-229ENST00000601373 PRO0255Q9UI72 69 aa9.68□□□□□ -0.86
IRF3-229ENST00000601373 GAGE12JA6NER3 117 aa9.67□□□□□ -0.86
IRF3-229ENST00000601373 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.67□□□□□ -0.86
IRF3-229ENST00000601373 PRB2P02812 416 aaPredicted RBP9.67□□□□□ -0.86
IRF3-229ENST00000601373 CTAG1AP78358 180 aa9.67□□□□□ -0.86
IRF3-229ENST00000601373 GAGE1Q13065 139 aa9.67□□□□□ -0.86
IRF3-229ENST00000601373 GAGE4Q13068 117 aa9.67□□□□□ -0.86
IRF3-229ENST00000601373 GAGE5Q13069 117 aa9.67□□□□□ -0.86
IRF3-229ENST00000601373 GAGE13Q4V321 117 aa9.67□□□□□ -0.86
IRF3-229ENST00000601373 CDPF1Q6NVV7 123 aa9.67□□□□□ -0.86
IRF3-229ENST00000601373 ERASQ7Z444 233 aa9.67□□□□□ -0.86
IRF3-229ENST00000601373 C20orf203Q8NBC4 194 aa9.67□□□□□ -0.86
IRF3-229ENST00000601373 RETNQ9HD89 108 aa9.67□□□□□ -0.86
IRF3-229ENST00000601373 HSBP1L1C9JCN9 74 aa9.66□□□□□ -0.86
IRF3-229ENST00000601373 PRSS1P07477 247 aa9.66□□□□□ -0.86
IRF3-229ENST00000601373 CRYBA4P53673 196 aa9.66□□□□□ -0.86
IRF3-229ENST00000601373 LGALS9CQ6DKI2 356 aa9.66□□□□□ -0.86
IRF3-229ENST00000601373 Q6ZN92 141 aa9.66□□□□□ -0.86
IRF3-229ENST00000601373 TMEM141Q96I45 108 aa9.66□□□□□ -0.86
IRF3-229ENST00000601373 TM2D3Q9BRN9 247 aa9.66□□□□□ -0.86
IRF3-229ENST00000601373 PRO1933Q9H354 126 aa9.66□□□□□ -0.86
IRF3-229ENST00000601373 CELA1Q9UNI1 258 aa9.66□□□□□ -0.86
IRF3-229ENST00000601373 TMEM97Q5BJF2 176 aa9.65□□□□□ -0.86
IRF3-229ENST00000601373 LINC01545Q5VT33 79 aa9.65□□□□□ -0.86
IRF3-229ENST00000601373 PHLDA1Q8WV24 401 aaPredicted RBP9.65□□□□□ -0.86
IRF3-229ENST00000601373 TIMM17AQ99595 171 aa9.65□□□□□ -0.86
IRF3-229ENST00000601373 MIEN1Q9BRT3 115 aa9.65□□□□□ -0.86
IRF3-229ENST00000601373 ZMAT4Q9H898 229 aa9.65□□□□□ -0.86
IRF3-229ENST00000601373 TENM3Q9P273 2699 aa9.65□□□□□ -0.87
IRF3-229ENST00000601373 TRAV9-2A0A087WT02 112 aa9.64□□□□□ -0.87
IRF3-229ENST00000601373 IGHV3-38A0A0C4DH36 116 aa9.64□□□□□ -0.87
IRF3-229ENST00000601373 PAX4O43316 350 aa9.64□□□□□ -0.87
IRF3-229ENST00000601373 GTSF1LQ9H1H1 148 aa9.64□□□□□ -0.87
IRF3-229ENST00000601373 TRAV12-1A0A0B4J245 112 aa9.63□□□□□ -0.87
IRF3-229ENST00000601373 IGIPA6NJ69 53 aa9.63□□□□□ -0.87
IRF3-229ENST00000601373 H0Y8G0 127 aa9.63□□□□□ -0.87
IRF3-229ENST00000601373 NPSP0C0P6 89 aa9.63□□□□□ -0.87
IRF3-229ENST00000601373 LINC00694P0DN24 101 aa9.63□□□□□ -0.87
IRF3-229ENST00000601373 SMAGPQ0VAQ4 97 aa9.63□□□□□ -0.87
IRF3-229ENST00000601373 SPATA45Q537H7 98 aa9.63□□□□□ -0.87
IRF3-229ENST00000601373 DEFB104AQ8WTQ1 72 aa9.63□□□□□ -0.87
IRF3-229ENST00000601373 CHCHD7Q9BUK0 85 aa9.63□□□□□ -0.87
IRF3-229ENST00000601373 UQCR10Q9UDW1 63 aa9.63□□□□□ -0.87
IRF3-229ENST00000601373 PYGO1Q9Y3Y4 419 aa9.63□□□□□ -0.87
IRF3-229ENST00000601373 LOC100131303A0A0U1RQF7 123 aa9.62□□□□□ -0.87
IRF3-229ENST00000601373 F5H768 121 aa9.62□□□□□ -0.87
IRF3-229ENST00000601373 GYPEP15421 78 aa9.62□□□□□ -0.87
IRF3-229ENST00000601373 RPL39P62891 51 aaKnown RBP9.62□□□□□ -0.87
IRF3-229ENST00000601373 C12orf74Q32Q52 190 aa9.62□□□□□ -0.87
IRF3-229ENST00000601373 PAPPA-AS1Q5QFB9 102 aa9.62□□□□□ -0.87
IRF3-229ENST00000601373 PAM16Q9Y3D7 125 aa9.62□□□□□ -0.87
IRF3-229ENST00000601373 A0A087WX48 190 aa9.61□□□□□ -0.87
IRF3-229ENST00000601373 ATP6V0E2Q8NHE4 81 aa9.61□□□□□ -0.87
IRF3-229ENST00000601373 C14orf144Q96I85 54 aa9.61□□□□□ -0.87
IRF3-229ENST00000601373 TIMM21Q9BVV7 248 aa9.61□□□□□ -0.87
IRF3-229ENST00000601373 SPANXA1Q9NS26 97 aa9.61□□□□□ -0.87
IRF3-229ENST00000601373 A0A0J9YWU9 116 aa9.6□□□□□ -0.87
IRF3-229ENST00000601373 M0R143 59 aa9.6□□□□□ -0.87
IRF3-229ENST00000601373 ODF1Q14990 250 aa9.6□□□□□ -0.87
IRF3-229ENST00000601373 SH2D6Q7Z4S9 175 aa9.6□□□□□ -0.87
IRF3-229ENST00000601373 BAALCQ8WXS3 180 aa9.6□□□□□ -0.87
IRF3-229ENST00000601373 TRBV25-1A0A075B6N4 114 aa9.59□□□□□ -0.87
IRF3-229ENST00000601373 TRAV26-1A0A087WT03 109 aa9.59□□□□□ -0.87
IRF3-229ENST00000601373 H7C423 109 aa9.59□□□□□ -0.87
IRF3-229ENST00000601373 PMVKQ15126 192 aa9.59□□□□□ -0.87
IRF3-229ENST00000601373 NTM-AS1Q6ZSK4 140 aa9.59□□□□□ -0.87
IRF3-229ENST00000601373 C11orf45Q8TAV5 145 aa9.59□□□□□ -0.87
IRF3-229ENST00000601373 VSIG2Q96IQ7 327 aa9.59□□□□□ -0.87
IRF3-229ENST00000601373 WWC2-AS2Q96NR7 200 aa9.59□□□□□ -0.87
IRF3-229ENST00000601373 PMCHL2Q9BQD1 86 aa9.59□□□□□ -0.87
IRF3-229ENST00000601373 H3BNG1 76 aa9.58□□□□□ -0.88
IRF3-229ENST00000601373 HTN3P15516 51 aa9.58□□□□□ -0.88
IRF3-229ENST00000601373 MRPL23Q16540 153 aaKnown RBP9.58□□□□□ -0.88
IRF3-229ENST00000601373 B9D2Q9BPU9 175 aa9.58□□□□□ -0.88
IRF3-229ENST00000601373 C2orf88Q9BSF0 95 aa9.58□□□□□ -0.88
IRF3-229ENST00000601373 TMEM243Q9BU79 118 aa9.58□□□□□ -0.88
IRF3-229ENST00000601373 CHTOPQ9Y3Y2 248 aaKnown RBP9.58□□□□□ -0.88
IRF3-229ENST00000601373 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.57□□□□□ -0.88
IRF3-229ENST00000601373 TRBV6-8A0A0A6YYG3 113 aa9.57□□□□□ -0.88
IRF3-229ENST00000601373 A0A0J9YY99 117 aa9.57□□□□□ -0.88
IRF3-229ENST00000601373 IGKV2-29A2NJV5 120 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms