RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 CAMPP49913 170 aa10.16□□□□□ -0.78
LIG1-219ENST00000600055 ATRAIDQ6UW56 229 aa10.16□□□□□ -0.78
LIG1-219ENST00000600055 CHCHD7Q9BUK0 85 aa10.16□□□□□ -0.78
LIG1-219ENST00000600055 DYNC1H1Q14204 4646 aaKnown RBP10.16□□□□□ -0.78
LIG1-219ENST00000600055 SMKR1H3BMG3 65 aa10.15□□□□□ -0.78
LIG1-219ENST00000600055 PSCAO43653 123 aa10.15□□□□□ -0.78
LIG1-219ENST00000600055 RPS10P46783 165 aaKnown RBP10.15□□□□□ -0.78
LIG1-219ENST00000600055 MRPL54Q6P161 138 aaKnown RBP10.15□□□□□ -0.78
LIG1-219ENST00000600055 Q8N976 141 aa10.15□□□□□ -0.78
LIG1-219ENST00000600055 TRAV8-3A0A0A6YYJ7 113 aa10.14□□□□□ -0.79
LIG1-219ENST00000600055 SDHAF1A6NFY7 115 aa10.14□□□□□ -0.79
LIG1-219ENST00000600055 NCR2O95944 276 aa10.14□□□□□ -0.79
LIG1-219ENST00000600055 HBBP68871 147 aa10.14□□□□□ -0.79
LIG1-219ENST00000600055 COTL1Q14019 142 aa10.14□□□□□ -0.79
LIG1-219ENST00000600055 COX19Q49B96 90 aa10.14□□□□□ -0.79
LIG1-219ENST00000600055 UBE2WQ96B02 151 aa10.14□□□□□ -0.79
LIG1-219ENST00000600055 TMEM243Q9BU79 118 aa10.14□□□□□ -0.79
LIG1-219ENST00000600055 TRBV6-5A0A0K0K1A5 114 aa10.13□□□□□ -0.79
LIG1-219ENST00000600055 LRCOL1A6NCL2 159 aa10.13□□□□□ -0.79
LIG1-219ENST00000600055 C16orf90A8MZG2 172 aa10.13□□□□□ -0.79
LIG1-219ENST00000600055 ANGP03950 147 aaKnown RBP10.13□□□□□ -0.79
LIG1-219ENST00000600055 RBX1P62877 108 aa10.13□□□□□ -0.79
LIG1-219ENST00000600055 ELOBQ15370 118 aa10.13□□□□□ -0.79
LIG1-219ENST00000600055 FAM104BQ5XKR9 115 aa10.13□□□□□ -0.79
LIG1-219ENST00000600055 MRAP2Q96G30 205 aa10.13□□□□□ -0.79
LIG1-219ENST00000600055 SMCO4Q9NRQ5 59 aa10.13□□□□□ -0.79
LIG1-219ENST00000600055 A0A1B0GXF2 115 aa10.12□□□□□ -0.79
LIG1-219ENST00000600055 EREGO14944 169 aa10.12□□□□□ -0.79
LIG1-219ENST00000600055 AMTP48728 403 aa10.12□□□□□ -0.79
LIG1-219ENST00000600055 PKIAP61925 76 aa10.12□□□□□ -0.79
LIG1-219ENST00000600055 MRPL51Q4U2R6 128 aaKnown RBP10.12□□□□□ -0.79
LIG1-219ENST00000600055 ENHOQ6UWT2 76 aa10.12□□□□□ -0.79
LIG1-219ENST00000600055 MAPKAPK5-AS1Q8N8E1 139 aa10.12□□□□□ -0.79
LIG1-219ENST00000600055 TM2D2Q9BX73 214 aa10.12□□□□□ -0.79
LIG1-219ENST00000600055 ST20Q9HBF5 79 aa10.12□□□□□ -0.79
LIG1-219ENST00000600055 IGKV2D-24A0A075B6R9 120 aa10.11□□□□□ -0.79
LIG1-219ENST00000600055 PMCHP20382 165 aa10.1□□□□□ -0.79
LIG1-219ENST00000600055 WFDC2Q14508 124 aa10.1□□□□□ -0.79
LIG1-219ENST00000600055 CLPSL2Q6UWE3 100 aa10.1□□□□□ -0.79
LIG1-219ENST00000600055 NRACQ8N912 160 aa10.1□□□□□ -0.79
LIG1-219ENST00000600055 TMEM70Q9BUB7 260 aa10.1□□□□□ -0.79
LIG1-219ENST00000600055 IGLV4-60A0A075B6I1 120 aa10.09□□□□□ -0.79
LIG1-219ENST00000600055 I3L3M4 83 aa10.09□□□□□ -0.79
LIG1-219ENST00000600055 UBE2L6O14933 153 aa10.09□□□□□ -0.79
LIG1-219ENST00000600055 POLR2KP53803 58 aaKnown RBP10.09□□□□□ -0.79
LIG1-219ENST00000600055 Q0VG73 95 aa10.09□□□□□ -0.79
LIG1-219ENST00000600055 LINC00269Q8N2A0 174 aa10.09□□□□□ -0.79
LIG1-219ENST00000600055 C20orf203Q8NBC4 194 aa10.09□□□□□ -0.79
LIG1-219ENST00000600055 RMI2Q96E14 147 aa10.09□□□□□ -0.79
LIG1-219ENST00000600055 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.08□□□□□ -0.8
LIG1-219ENST00000600055 IGKV2-29A2NJV5 120 aaPredicted RBP10.08□□□□□ -0.8
LIG1-219ENST00000600055 LECT2O14960 151 aa10.08□□□□□ -0.8
LIG1-219ENST00000600055 ATP6V1G1O75348 118 aa10.08□□□□□ -0.8
LIG1-219ENST00000600055 PPP1R17O96001 155 aa10.08□□□□□ -0.8
LIG1-219ENST00000600055 TSHBP01222 138 aa10.08□□□□□ -0.8
LIG1-219ENST00000600055 CRPP02741 224 aa10.08□□□□□ -0.8
LIG1-219ENST00000600055 APCSP02743 223 aa10.08□□□□□ -0.8
LIG1-219ENST00000600055 BAALCQ8WXS3 180 aa10.08□□□□□ -0.8
LIG1-219ENST00000600055 A0A1B0GUV1 79 aa10.07□□□□□ -0.8
LIG1-219ENST00000600055 PRR34Q9NV39 138 aa10.07□□□□□ -0.8
LIG1-219ENST00000600055 PGPEP1Q9NXJ5 209 aa10.07□□□□□ -0.8
LIG1-219ENST00000600055 COX11Q9Y6N1 276 aa10.07□□□□□ -0.8
LIG1-219ENST00000600055 TRBV24-1A0A075B6N3 115 aa10.06□□□□□ -0.8
LIG1-219ENST00000600055 TRBV27A0A0K0K1C4 114 aa10.06□□□□□ -0.8
LIG1-219ENST00000600055 D6R8Y8 96 aa10.06□□□□□ -0.8
LIG1-219ENST00000600055 HLA-DQA1P01909 254 aa10.06□□□□□ -0.8
LIG1-219ENST00000600055 MT-ND6P03923 174 aa10.06□□□□□ -0.8
LIG1-219ENST00000600055 CKS2P33552 79 aa10.06□□□□□ -0.8
LIG1-219ENST00000600055 SUMO2P61956 95 aaKnown RBP10.06□□□□□ -0.8
LIG1-219ENST00000600055 Q8N814 137 aa10.06□□□□□ -0.8
LIG1-219ENST00000600055 C1orf43Q9BWL3 253 aa10.06□□□□□ -0.8
LIG1-219ENST00000600055 GNB1LQ9BYB4 327 aa10.06□□□□□ -0.8
LIG1-219ENST00000600055 KIAA1109Q2LD37 5005 aa10.06□□□□□ -0.8
LIG1-219ENST00000600055 DNAH5Q8TE73 4624 aa10.05□□□□□ -0.8
LIG1-219ENST00000600055 PPBPP02775 128 aa10.05□□□□□ -0.8
LIG1-219ENST00000600055 REG3AQ06141 175 aa10.05□□□□□ -0.8
LIG1-219ENST00000600055 LRP1BQ9NZR2 4599 aa10.05□□□□□ -0.8
LIG1-219ENST00000600055 VCYO14598 125 aa10.04□□□□□ -0.8
LIG1-219ENST00000600055 TNFRSF6BO95407 300 aa10.04□□□□□ -0.8
LIG1-219ENST00000600055 ESDP10768 282 aa10.04□□□□□ -0.8
LIG1-219ENST00000600055 MIAQ16674 131 aa10.04□□□□□ -0.8
LIG1-219ENST00000600055 RNASEKQ6P5S7 137 aaKnown RBP10.04□□□□□ -0.8
LIG1-219ENST00000600055 IGLV10-54A0A075B6I4 117 aa10.03□□□□□ -0.8
LIG1-219ENST00000600055 NPYP01303 97 aa10.03□□□□□ -0.8
LIG1-219ENST00000600055 FGF6P10767 208 aa10.03□□□□□ -0.8
LIG1-219ENST00000600055 AMMECR1LQ6DCA0 310 aa10.03□□□□□ -0.8
LIG1-219ENST00000600055 CDPF1Q6NVV7 123 aa10.03□□□□□ -0.8
LIG1-219ENST00000600055 HERC2O95714 4834 aa10.03□□□□□ -0.8
LIG1-219ENST00000600055 H7C423 109 aa10.02□□□□□ -0.81
LIG1-219ENST00000600055 KRTAP26-1Q6PEX3 210 aa10.02□□□□□ -0.81
LIG1-219ENST00000600055 CBLN2Q8IUK8 224 aa10.02□□□□□ -0.81
LIG1-219ENST00000600055 C20orf78Q9BR46 151 aa10.02□□□□□ -0.81
LIG1-219ENST00000600055 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.01□□□□□ -0.81
LIG1-219ENST00000600055 IGLV5-52A0A0A0MRZ9 124 aa10.01□□□□□ -0.81
LIG1-219ENST00000600055 TGIF2-C20orf24A0A0A6YYL0 155 aa10.01□□□□□ -0.81
LIG1-219ENST00000600055 IGKV3OR2-268A0A0C4DH90 116 aa10.01□□□□□ -0.81
LIG1-219ENST00000600055 FCER1GP30273 86 aa10.01□□□□□ -0.81
LIG1-219ENST00000600055 KRTAP10-1P60331 282 aa10.01□□□□□ -0.81
LIG1-219ENST00000600055 TMEM136Q6ZRR5 245 aa10.01□□□□□ -0.81
LIG1-219ENST00000600055 ORMDL3Q8N138 153 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms