RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 RPL37AP61513 92 aaKnown RBP11.06□□□□□ -0.64
PNKP-210ENST00000597965 V9GYV3 84 aa11.06□□□□□ -0.64
PNKP-210ENST00000597965 S100PP25815 95 aa11.05□□□□□ -0.64
PNKP-210ENST00000597965 FAM231DQ6ZW35 169 aa11.05□□□□□ -0.64
PNKP-210ENST00000597965 TMSB15BA0A087X1C1 80 aa11.04□□□□□ -0.64
PNKP-210ENST00000597965 ZNF56Q15929 161 aa11.04□□□□□ -0.64
PNKP-210ENST00000597965 ENHOQ6UWT2 76 aa11.04□□□□□ -0.64
PNKP-210ENST00000597965 CHCHD5Q9BSY4 110 aa11.04□□□□□ -0.64
PNKP-210ENST00000597965 RNASE7Q9H1E1 156 aaKnown RBP11.04□□□□□ -0.64
PNKP-210ENST00000597965 HLA-DQA1P01909 254 aa11.03□□□□□ -0.64
PNKP-210ENST00000597965 MPV17L2Q567V2 206 aa11.03□□□□□ -0.64
PNKP-210ENST00000597965 BIN3Q9NQY0 253 aa11.03□□□□□ -0.64
PNKP-210ENST00000597965 USP17L23D6RBM5 183 aa11.02□□□□□ -0.65
PNKP-210ENST00000597965 NUDT10Q8NFP7 164 aa11.02□□□□□ -0.65
PNKP-210ENST00000597965 NUDT11Q96G61 164 aa11.02□□□□□ -0.65
PNKP-210ENST00000597965 C19orf71A6NCJ1 209 aa11.01□□□□□ -0.65
PNKP-210ENST00000597965 GATCO43716 136 aaKnown RBP11.01□□□□□ -0.65
PNKP-210ENST00000597965 RPS10P46783 165 aaKnown RBP11.01□□□□□ -0.65
PNKP-210ENST00000597965 RPL19P84098 196 aaKnown RBP11.01□□□□□ -0.65
PNKP-210ENST00000597965 C9orf163Q8N9P6 203 aa11.01□□□□□ -0.65
PNKP-210ENST00000597965 NEXN-AS1Q8NBZ9 246 aa11.01□□□□□ -0.65
PNKP-210ENST00000597965 LRP1Q07954 4544 aaKnown RBP11□□□□□ -0.65
PNKP-210ENST00000597965 TRAV9-1A0A075B6T8 112 aa11□□□□□ -0.65
PNKP-210ENST00000597965 SMIM17P0DL12 118 aa11□□□□□ -0.65
PNKP-210ENST00000597965 SPANXN1Q5VSR9 72 aa11□□□□□ -0.65
PNKP-210ENST00000597965 PRR27Q6MZM9 219 aa11□□□□□ -0.65
PNKP-210ENST00000597965 TRBV25-1A0A075B6N4 114 aa10.99□□□□□ -0.65
PNKP-210ENST00000597965 C1orf196B1AJZ1 125 aa10.99□□□□□ -0.65
PNKP-210ENST00000597965 F5H697 171 aa10.99□□□□□ -0.65
PNKP-210ENST00000597965 BTF3L4Q96K17 158 aa10.99□□□□□ -0.65
PNKP-210ENST00000597965 PRR34Q9NV39 138 aa10.99□□□□□ -0.65
PNKP-210ENST00000597965 SMIM27A0A1W2PRY6 76 aa10.98□□□□□ -0.65
PNKP-210ENST00000597965 PRSS1P07477 247 aa10.98□□□□□ -0.65
PNKP-210ENST00000597965 OR5AL1P0C617 328 aa10.98□□□□□ -0.65
PNKP-210ENST00000597965 RAB5BP61020 215 aa10.97□□□□□ -0.65
PNKP-210ENST00000597965 OR10AG1Q8NH19 301 aa10.97□□□□□ -0.65
PNKP-210ENST00000597965 SSBP4Q9BWG4 385 aaPredicted RBP10.97□□□□□ -0.65
PNKP-210ENST00000597965 LOC105371267A0A1B0GV96 52 aa10.96□□□□□ -0.65
PNKP-210ENST00000597965 PHOX2AO14813 284 aa10.96□□□□□ -0.65
PNKP-210ENST00000597965 SNAI2O43623 268 aa10.96□□□□□ -0.65
PNKP-210ENST00000597965 CT83Q5H943 113 aa10.96□□□□□ -0.65
PNKP-210ENST00000597965 DAZAP1Q96EP5 407 aaKnown RBP10.96□□□□□ -0.65
PNKP-210ENST00000597965 AP1S3Q96PC3 154 aa10.96□□□□□ -0.65
PNKP-210ENST00000597965 RPP21Q9H633 154 aaKnown RBP10.96□□□□□ -0.65
PNKP-210ENST00000597965 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.95□□□□□ -0.66
PNKP-210ENST00000597965 TRAV8-4A0A0B4J246 113 aa10.95□□□□□ -0.66
PNKP-210ENST00000597965 H7C1H1 209 aa10.95□□□□□ -0.66
PNKP-210ENST00000597965 P01737 135 aa10.95□□□□□ -0.66
PNKP-210ENST00000597965 TRGC2P03986 189 aa10.95□□□□□ -0.66
PNKP-210ENST00000597965 RBX1P62877 108 aa10.95□□□□□ -0.66
PNKP-210ENST00000597965 Q6ZRU5 148 aa10.95□□□□□ -0.66
PNKP-210ENST00000597965 LINC00269Q8N2A0 174 aa10.95□□□□□ -0.66
PNKP-210ENST00000597965 TSKUQ8WUA8 353 aa10.95□□□□□ -0.66
PNKP-210ENST00000597965 IGHV1-24A0A0C4DH33 117 aa10.93□□□□□ -0.66
PNKP-210ENST00000597965 A8MWL6 223 aa10.93□□□□□ -0.66
PNKP-210ENST00000597965 GZMBP10144 247 aa10.93□□□□□ -0.66
PNKP-210ENST00000597965 CNBPP62633 177 aaKnown RBP10.93□□□□□ -0.66
PNKP-210ENST00000597965 IQCJQ1A5X6 159 aa10.93□□□□□ -0.66
PNKP-210ENST00000597965 SDIM1Q6ZPB5 146 aa10.93□□□□□ -0.66
PNKP-210ENST00000597965 NTM-AS1Q6ZSK4 140 aa10.93□□□□□ -0.66
PNKP-210ENST00000597965 AP5S1Q9NUS5 200 aa10.93□□□□□ -0.66
PNKP-210ENST00000597965 HMCN2Q8NDA2 5059 aa10.93□□□□□ -0.66
PNKP-210ENST00000597965 FAT3Q8TDW7 4589 aa10.92□□□□□ -0.66
PNKP-210ENST00000597965 REG3AQ06141 175 aa10.92□□□□□ -0.66
PNKP-210ENST00000597965 GAGE6Q13070 117 aa10.92□□□□□ -0.66
PNKP-210ENST00000597965 CLPSL2Q6UWE3 100 aa10.92□□□□□ -0.66
PNKP-210ENST00000597965 NUP35Q8NFH5 326 aa10.92□□□□□ -0.66
PNKP-210ENST00000597965 OR2D3Q8NGH3 330 aa10.92□□□□□ -0.66
PNKP-210ENST00000597965 DPH3Q96FX2 82 aa10.92□□□□□ -0.66
PNKP-210ENST00000597965 RNF185Q96GF1 192 aa10.92□□□□□ -0.66
PNKP-210ENST00000597965 GFRA4Q9GZZ7 299 aa10.92□□□□□ -0.66
PNKP-210ENST00000597965 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.92□□□□□ -0.66
PNKP-210ENST00000597965 IGHV3-64A0A075B6Q5 118 aa10.91□□□□□ -0.66
PNKP-210ENST00000597965 hDV102S1A0JD36 115 aa10.91□□□□□ -0.66
PNKP-210ENST00000597965 FAM231BA6NCW3 169 aa10.91□□□□□ -0.66
PNKP-210ENST00000597965 FOXA3P55318 350 aaPredicted RBP10.91□□□□□ -0.66
PNKP-210ENST00000597965 GTSF1Q8WW33 167 aa10.91□□□□□ -0.66
PNKP-210ENST00000597965 NAT8BQ9UHF3 227 aa10.91□□□□□ -0.66
PNKP-210ENST00000597965 KRTAP26-1Q6PEX3 210 aa10.9□□□□□ -0.66
PNKP-210ENST00000597965 A0A1B0GUV1 79 aa10.89□□□□□ -0.67
PNKP-210ENST00000597965 HIGD1CA8MV81 97 aa10.89□□□□□ -0.67
PNKP-210ENST00000597965 TRGC1P0CF51 173 aa10.89□□□□□ -0.67
PNKP-210ENST00000597965 HNRNPA3P51991 378 aaKnown RBP10.89□□□□□ -0.67
PNKP-210ENST00000597965 SSTP61278 116 aa10.89□□□□□ -0.67
PNKP-210ENST00000597965 CIRBPQ14011 172 aaKnown RBP10.89□□□□□ -0.67
PNKP-210ENST00000597965 COX19Q49B96 90 aa10.89□□□□□ -0.67
PNKP-210ENST00000597965 TRAPPC1Q9Y5R8 145 aa10.89□□□□□ -0.67
PNKP-210ENST00000597965 KIF25-AS1Q9Y6Z4 181 aa10.89□□□□□ -0.67
PNKP-210ENST00000597965 MUC21A0A0G2JKD1 596 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 MUC21A0A140T8X8 626 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 HIST1H2BKO60814 126 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 HIST1H2BJP06899 126 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 HIST1H2BOP23527 126 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 HIST1H2BBP33778 126 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 HIST1H2BDP58876 126 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 RPS20P60866 119 aaKnown RBP10.88□□□□□ -0.67
PNKP-210ENST00000597965 HIST1H2BCP62807 126 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 FABP9Q0Z7S8 132 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 HIST2H2BEQ16778 126 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms