RNA–Protein interactions for RNA: ENST00000596403.1

SIPA1L3-207, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 3

Gene SIPA1L3, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-207ENST00000596403 SAMD10Q9BYL1 202 aa9.5□□□□□ -0.89
SIPA1L3-207ENST00000596403 NAT8BQ9UHF3 227 aa9.5□□□□□ -0.89
SIPA1L3-207ENST00000596403 TGIF2-C20orf24A0A0A6YYL0 155 aa9.49□□□□□ -0.89
SIPA1L3-207ENST00000596403 CXCL1P09341 107 aa9.49□□□□□ -0.89
SIPA1L3-207ENST00000596403 FAM74A4Q5TZK3 123 aa9.49□□□□□ -0.89
SIPA1L3-207ENST00000596403 RASL11AQ6T310 242 aa9.49□□□□□ -0.89
SIPA1L3-207ENST00000596403 C14orf178Q8N769 122 aaPredicted RBP9.49□□□□□ -0.89
SIPA1L3-207ENST00000596403 OR2D3Q8NGH3 330 aa9.49□□□□□ -0.89
SIPA1L3-207ENST00000596403 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
SIPA1L3-207ENST00000596403 UFSP1Q6NVU6 142 aa9.48□□□□□ -0.89
SIPA1L3-207ENST00000596403 Q6ZRU5 148 aa9.48□□□□□ -0.89
SIPA1L3-207ENST00000596403 PHLDA3Q9Y5J5 127 aa9.48□□□□□ -0.89
SIPA1L3-207ENST00000596403 UBR4Q5T4S7 5183 aa9.48□□□□□ -0.89
SIPA1L3-207ENST00000596403 IGKV3D-20A0A0C4DH25 116 aa9.47□□□□□ -0.89
SIPA1L3-207ENST00000596403 ATP5L2Q7Z4Y8 100 aa9.47□□□□□ -0.89
SIPA1L3-207ENST00000596403 TRBV7-3A0A075B6L6 115 aa9.46□□□□□ -0.9
SIPA1L3-207ENST00000596403 HIGD1CA8MV81 97 aa9.46□□□□□ -0.9
SIPA1L3-207ENST00000596403 MIAQ16674 131 aa9.46□□□□□ -0.9
SIPA1L3-207ENST00000596403 NUP35Q8NFH5 326 aa9.46□□□□□ -0.9
SIPA1L3-207ENST00000596403 DPH3P1Q9H4G8 78 aa9.46□□□□□ -0.9
SIPA1L3-207ENST00000596403 LRP1Q07954 4544 aaKnown RBP9.45□□□□□ -0.9
SIPA1L3-207ENST00000596403 USP17L23D6RBM5 183 aa9.45□□□□□ -0.9
SIPA1L3-207ENST00000596403 H3BVH4 76 aa9.45□□□□□ -0.9
SIPA1L3-207ENST00000596403 ARMS2P0C7Q2 107 aa9.45□□□□□ -0.9
SIPA1L3-207ENST00000596403 RPS10P46783 165 aaKnown RBP9.45□□□□□ -0.9
SIPA1L3-207ENST00000596403 TMEM97Q5BJF2 176 aa9.45□□□□□ -0.9
SIPA1L3-207ENST00000596403 DNLZQ5SXM8 178 aa9.45□□□□□ -0.9
SIPA1L3-207ENST00000596403 ZFP82Q8N141 532 aa9.45□□□□□ -0.9
SIPA1L3-207ENST00000596403 GTSF1Q8WW33 167 aa9.45□□□□□ -0.9
SIPA1L3-207ENST00000596403 JPT2Q9H910 190 aa9.45□□□□□ -0.9
SIPA1L3-207ENST00000596403 TRBV6-8A0A0A6YYG3 113 aa9.44□□□□□ -0.9
SIPA1L3-207ENST00000596403 A0A1B0GW15 77 aa9.44□□□□□ -0.9
SIPA1L3-207ENST00000596403 C1orf196B1AJZ1 125 aa9.44□□□□□ -0.9
SIPA1L3-207ENST00000596403 HLA-DQA1P01909 254 aa9.44□□□□□ -0.9
SIPA1L3-207ENST00000596403 MT-ND6P03923 174 aa9.44□□□□□ -0.9
SIPA1L3-207ENST00000596403 ANGP03950 147 aaKnown RBP9.44□□□□□ -0.9
SIPA1L3-207ENST00000596403 WDR73Q6P4I2 378 aa9.44□□□□□ -0.9
SIPA1L3-207ENST00000596403 C9orf163Q8N9P6 203 aa9.44□□□□□ -0.9
SIPA1L3-207ENST00000596403 DNAJC30Q96LL9 226 aa9.44□□□□□ -0.9
SIPA1L3-207ENST00000596403 GNB1LQ9BYB4 327 aa9.44□□□□□ -0.9
SIPA1L3-207ENST00000596403 Q9UF83 564 aa9.44□□□□□ -0.9
SIPA1L3-207ENST00000596403 F2Z2F3 143 aa9.43□□□□□ -0.9
SIPA1L3-207ENST00000596403 IGLC6P0CF74 106 aa9.43□□□□□ -0.9
SIPA1L3-207ENST00000596403 UBE2D3P61077 147 aa9.43□□□□□ -0.9
SIPA1L3-207ENST00000596403 UBE2D2P62837 147 aa9.43□□□□□ -0.9
SIPA1L3-207ENST00000596403 A0A087WWL8 130 aa9.42□□□□□ -0.9
SIPA1L3-207ENST00000596403 A0A1B0GUT8 65 aa9.42□□□□□ -0.9
SIPA1L3-207ENST00000596403 A0A1B0GXF2 115 aa9.42□□□□□ -0.9
SIPA1L3-207ENST00000596403 M0R381 172 aa9.42□□□□□ -0.9
SIPA1L3-207ENST00000596403 S100A8P05109 93 aa9.42□□□□□ -0.9
SIPA1L3-207ENST00000596403 RAB5BP61020 215 aa9.42□□□□□ -0.9
SIPA1L3-207ENST00000596403 ENHOQ6UWT2 76 aa9.42□□□□□ -0.9
SIPA1L3-207ENST00000596403 BORCS7Q96B45 105 aa9.42□□□□□ -0.9
SIPA1L3-207ENST00000596403 DPH3Q96FX2 82 aa9.42□□□□□ -0.9
SIPA1L3-207ENST00000596403 CHCHD5Q9BSY4 110 aa9.42□□□□□ -0.9
SIPA1L3-207ENST00000596403 TRGC2P03986 189 aa9.41□□□□□ -0.9
SIPA1L3-207ENST00000596403 CTRLP40313 264 aa9.41□□□□□ -0.9
SIPA1L3-207ENST00000596403 RIGQ13278 110 aa9.41□□□□□ -0.9
SIPA1L3-207ENST00000596403 FER1L6-AS1Q8NA97 138 aa9.41□□□□□ -0.9
SIPA1L3-207ENST00000596403 GATD1Q8NB37 220 aa9.41□□□□□ -0.9
SIPA1L3-207ENST00000596403 PGLYRP4Q96LB8 373 aa9.41□□□□□ -0.9
SIPA1L3-207ENST00000596403 SSBP4Q9BWG4 385 aaPredicted RBP9.41□□□□□ -0.9
SIPA1L3-207ENST00000596403 CNFNQ9BYD5 112 aa9.41□□□□□ -0.9
SIPA1L3-207ENST00000596403 PHOX2AO14813 284 aa9.4□□□□□ -0.9
SIPA1L3-207ENST00000596403 PRSS1P07477 247 aa9.4□□□□□ -0.9
SIPA1L3-207ENST00000596403 OR5AL1P0C617 328 aa9.4□□□□□ -0.9
SIPA1L3-207ENST00000596403 GZMBP10144 247 aa9.4□□□□□ -0.9
SIPA1L3-207ENST00000596403 HNRNPA3P51991 378 aaKnown RBP9.4□□□□□ -0.9
SIPA1L3-207ENST00000596403 RAB4BP61018 213 aa9.4□□□□□ -0.9
SIPA1L3-207ENST00000596403 HBBP68871 147 aa9.4□□□□□ -0.9
SIPA1L3-207ENST00000596403 TRAPPC1Q9Y5R8 145 aa9.4□□□□□ -0.9
SIPA1L3-207ENST00000596403 FAT3Q8TDW7 4589 aa9.4□□□□□ -0.91
SIPA1L3-207ENST00000596403 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.39□□□□□ -0.91
SIPA1L3-207ENST00000596403 GRIFINA4D1Z8 144 aa9.39□□□□□ -0.91
SIPA1L3-207ENST00000596403 SNAI2O43623 268 aa9.39□□□□□ -0.91
SIPA1L3-207ENST00000596403 MPV17L2Q567V2 206 aa9.39□□□□□ -0.91
SIPA1L3-207ENST00000596403 MRPL54Q6P161 138 aaKnown RBP9.39□□□□□ -0.91
SIPA1L3-207ENST00000596403 LYZL1Q6UWQ5 148 aa9.39□□□□□ -0.91
SIPA1L3-207ENST00000596403 TMEM136Q6ZRR5 245 aa9.39□□□□□ -0.91
SIPA1L3-207ENST00000596403 RNF185Q96GF1 192 aa9.39□□□□□ -0.91
SIPA1L3-207ENST00000596403 AP5S1Q9NUS5 200 aa9.39□□□□□ -0.91
SIPA1L3-207ENST00000596403 TMSB15BA0A087X1C1 80 aa9.38□□□□□ -0.91
SIPA1L3-207ENST00000596403 ZNF56Q15929 161 aa9.38□□□□□ -0.91
SIPA1L3-207ENST00000596403 SDIM1Q6ZPB5 146 aa9.38□□□□□ -0.91
SIPA1L3-207ENST00000596403 TMA7Q9Y2S6 64 aaKnown RBP9.38□□□□□ -0.91
SIPA1L3-207ENST00000596403 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.38□□□□□ -0.91
SIPA1L3-207ENST00000596403 MT1HL1P0DM35 61 aa9.37□□□□□ -0.91
SIPA1L3-207ENST00000596403 CACNG7P62955 275 aa9.37□□□□□ -0.91
SIPA1L3-207ENST00000596403 TRBV25-1A0A075B6N4 114 aa9.36□□□□□ -0.91
SIPA1L3-207ENST00000596403 IGHV3-64A0A075B6Q5 118 aa9.36□□□□□ -0.91
SIPA1L3-207ENST00000596403 CNBPP62633 177 aaKnown RBP9.36□□□□□ -0.91
SIPA1L3-207ENST00000596403 FABP9Q0Z7S8 132 aa9.36□□□□□ -0.91
SIPA1L3-207ENST00000596403 C7orf33Q8WU49 177 aa9.36□□□□□ -0.91
SIPA1L3-207ENST00000596403 MRPL18Q9H0U6 180 aaKnown RBP9.36□□□□□ -0.91
SIPA1L3-207ENST00000596403 PRR34Q9NV39 138 aa9.36□□□□□ -0.91
SIPA1L3-207ENST00000596403 HIST1H2BKO60814 126 aa9.35□□□□□ -0.91
SIPA1L3-207ENST00000596403 HIST1H2BJP06899 126 aa9.35□□□□□ -0.91
SIPA1L3-207ENST00000596403 TRGC1P0CF51 173 aa9.35□□□□□ -0.91
SIPA1L3-207ENST00000596403 NTF3P20783 257 aa9.35□□□□□ -0.91
SIPA1L3-207ENST00000596403 HIST1H2BOP23527 126 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms