RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 DSCAMO60469 2012 aa13.72□□□□□ -0.21
SYNM-204ENST00000594047 SIVA1O15304 175 aa13.72□□□□□ -0.21
SYNM-204ENST00000594047 IGLV2-14P01704 120 aa13.72□□□□□ -0.21
SYNM-204ENST00000594047 SLPIP03973 132 aa13.71□□□□□ -0.21
SYNM-204ENST00000594047 K7EP13 123 aa13.71□□□□□ -0.21
SYNM-204ENST00000594047 ZNF80P51504 273 aaPredicted RBP13.71□□□□□ -0.21
SYNM-204ENST00000594047 LINC01006Q8NI28 216 aa13.71□□□□□ -0.21
SYNM-204ENST00000594047 FRMD6-AS1P0C7T7 363 aa13.71□□□□□ -0.22
SYNM-204ENST00000594047 FBXL19-AS1Q494R0 122 aa13.71□□□□□ -0.22
SYNM-204ENST00000594047 FAM167A-AS1Q96KT0 104 aa13.7□□□□□ -0.22
SYNM-204ENST00000594047 COL4A4P53420 1690 aaPredicted RBP13.7□□□□□ -0.22
SYNM-204ENST00000594047 C11orf86A6NJI1 115 aa13.7□□□□□ -0.22
SYNM-204ENST00000594047 BRI3O95415 125 aa13.7□□□□□ -0.22
SYNM-204ENST00000594047 ANKRD39Q53RE8 183 aa13.7□□□□□ -0.22
SYNM-204ENST00000594047 SEC61GP60059 68 aa13.7□□□□□ -0.22
SYNM-204ENST00000594047 TOMM6Q96B49 74 aa13.7□□□□□ -0.22
SYNM-204ENST00000594047 WFDC10BQ8IUB3 73 aa13.69□□□□□ -0.22
SYNM-204ENST00000594047 WNK1Q9H4A3 2382 aa13.69□□□□□ -0.22
SYNM-204ENST00000594047 NUPR1O60356 82 aa13.69□□□□□ -0.22
SYNM-204ENST00000594047 TRAV10A0A0B4J240 114 aa13.69□□□□□ -0.22
SYNM-204ENST00000594047 CDPF1Q6NVV7 123 aa13.69□□□□□ -0.22
SYNM-204ENST00000594047 CUL9Q8IWT3 2517 aa13.68□□□□□ -0.22
SYNM-204ENST00000594047 C1orf229Q6ZS94 237 aaPredicted RBP13.68□□□□□ -0.22
SYNM-204ENST00000594047 ODF3BA8MYP8 253 aa13.68□□□□□ -0.22
SYNM-204ENST00000594047 IGLV2-8P01709 118 aa13.68□□□□□ -0.22
SYNM-204ENST00000594047 SVIPQ8NHG7 77 aa13.67□□□□□ -0.22
SYNM-204ENST00000594047 LGALS9O00182 355 aa13.67□□□□□ -0.22
SYNM-204ENST00000594047 IGHV4-30-4P0DP06 118 aa13.67□□□□□ -0.22
SYNM-204ENST00000594047 TMEM89A2RUT3 159 aa13.67□□□□□ -0.22
SYNM-204ENST00000594047 KPRPQ5T749 579 aaPredicted RBP13.67□□□□□ -0.22
SYNM-204ENST00000594047 PSMB8P28062 276 aa13.66□□□□□ -0.22
SYNM-204ENST00000594047 ZNF702PQ9H963 129 aa13.66□□□□□ -0.22
SYNM-204ENST00000594047 LYRM9A8MSI8 78 aa13.66□□□□□ -0.22
SYNM-204ENST00000594047 OBSL1O75147 1896 aa13.66□□□□□ -0.22
SYNM-204ENST00000594047 TRBV10-2A0A0K0K1G8 114 aa13.65□□□□□ -0.22
SYNM-204ENST00000594047 NOTCH2Q04721 2471 aa13.65□□□□□ -0.22
SYNM-204ENST00000594047 CXCL5P42830 114 aa13.64□□□□□ -0.23
SYNM-204ENST00000594047 C20orf144Q9BQM9 153 aa13.64□□□□□ -0.23
SYNM-204ENST00000594047 FREM1Q5H8C1 2179 aa13.64□□□□□ -0.23
SYNM-204ENST00000594047 ATRXP46100 2492 aa13.63□□□□□ -0.23
SYNM-204ENST00000594047 IGLV2-11P01706 119 aa13.63□□□□□ -0.23
SYNM-204ENST00000594047 H0YGX0 51 aa13.63□□□□□ -0.23
SYNM-204ENST00000594047 EDN2P20800 178 aa13.62□□□□□ -0.23
SYNM-204ENST00000594047 MED12LQ86YW9 2145 aa13.62□□□□□ -0.23
SYNM-204ENST00000594047 NEXN-AS1Q8NBZ9 246 aa13.62□□□□□ -0.23
SYNM-204ENST00000594047 TDRG1Q3Y452 100 aa13.62□□□□□ -0.23
SYNM-204ENST00000594047 IGHV1-58A0A0C4DH39 117 aa13.61□□□□□ -0.23
SYNM-204ENST00000594047 MIFP14174 115 aa13.61□□□□□ -0.23
SYNM-204ENST00000594047 FXYD2P54710 66 aa13.61□□□□□ -0.23
SYNM-204ENST00000594047 PIK3CD-AS1Q5SR53 167 aa13.61□□□□□ -0.23
SYNM-204ENST00000594047 RETNLBQ9BQ08 111 aa13.61□□□□□ -0.23
SYNM-204ENST00000594047 PCDH15Q96QU1 1955 aa13.6□□□□□ -0.23
SYNM-204ENST00000594047 KIAA1549Q9HCM3 1950 aa13.6□□□□□ -0.23
SYNM-204ENST00000594047 CEP192Q8TEP8 1941 aa13.59□□□□□ -0.23
SYNM-204ENST00000594047 A8MZ25 164 aa13.59□□□□□ -0.23
SYNM-204ENST00000594047 K7EQG2 157 aa13.59□□□□□ -0.23
SYNM-204ENST00000594047 C3orf84H3BNL1 204 aa13.59□□□□□ -0.23
SYNM-204ENST00000594047 CFAP126Q5VTH2 177 aa13.59□□□□□ -0.23
SYNM-204ENST00000594047 C1orf158Q8N1D5 194 aa13.59□□□□□ -0.23
SYNM-204ENST00000594047 C20orf203Q8NBC4 194 aa13.59□□□□□ -0.23
SYNM-204ENST00000594047 LY6LH3BQJ8 138 aa13.58□□□□□ -0.24
SYNM-204ENST00000594047 TMEM258P61165 79 aa13.58□□□□□ -0.24
SYNM-204ENST00000594047 UFSP1Q6NVU6 142 aa13.58□□□□□ -0.24
SYNM-204ENST00000594047 C11orf71Q6IPW1 123 aa13.58□□□□□ -0.24
SYNM-204ENST00000594047 PRR14LQ5THK1 2151 aa13.57□□□□□ -0.24
SYNM-204ENST00000594047 KIAA1549LQ6ZVL6 1849 aa13.57□□□□□ -0.24
SYNM-204ENST00000594047 NUPR2A6NF83 97 aa13.57□□□□□ -0.24
SYNM-204ENST00000594047 LINC00322Q6ZN03 302 aaPredicted RBP13.57□□□□□ -0.24
SYNM-204ENST00000594047 A0A0B4J2C4 111 aa13.56□□□□□ -0.24
SYNM-204ENST00000594047 SONP18583 2426 aaKnown RBP13.56□□□□□ -0.24
SYNM-204ENST00000594047 UBE2D2P62837 147 aa13.56□□□□□ -0.24
SYNM-204ENST00000594047 SYCNQ0VAF6 134 aa13.56□□□□□ -0.24
SYNM-204ENST00000594047 CSPG4Q6UVK1 2322 aa13.56□□□□□ -0.24
SYNM-204ENST00000594047 PRRC2AP48634 2157 aaKnown RBP13.56□□□□□ -0.24
SYNM-204ENST00000594047 TEX49A0A1B0GTD5 131 aa13.56□□□□□ -0.24
SYNM-204ENST00000594047 SMIM9A6NGZ8 99 aa13.56□□□□□ -0.24
SYNM-204ENST00000594047 MED14OSP0DP75 135 aa13.56□□□□□ -0.24
SYNM-204ENST00000594047 TRAV23DV6A0A075B6W5 121 aa13.55□□□□□ -0.24
SYNM-204ENST00000594047 TRBV6-8A0A0A6YYG3 113 aa13.55□□□□□ -0.24
SYNM-204ENST00000594047 HIVEP3Q5T1R4 2406 aa13.55□□□□□ -0.24
SYNM-204ENST00000594047 AVPP01185 164 aa13.55□□□□□ -0.24
SYNM-204ENST00000594047 MLST8Q9BVC4 326 aa13.54□□□□□ -0.24
SYNM-204ENST00000594047 CDKN2A-AS1Q9UH64 79 aa13.54□□□□□ -0.24
SYNM-204ENST00000594047 SS18L2Q9UHA2 77 aa13.54□□□□□ -0.24
SYNM-204ENST00000594047 FAM236AA0A1B0GUQ0 79 aa13.54□□□□□ -0.24
SYNM-204ENST00000594047 FAM236BA0A1B0GV22 79 aa13.54□□□□□ -0.24
SYNM-204ENST00000594047 LINC01620Q4KN68 170 aa13.54□□□□□ -0.24
SYNM-204ENST00000594047 PTH2Q96A98 100 aa13.53□□□□□ -0.24
SYNM-204ENST00000594047 NUP210LQ5VU65 1888 aa13.53□□□□□ -0.24
SYNM-204ENST00000594047 PLAC8L1A1L4L8 177 aa13.53□□□□□ -0.24
SYNM-204ENST00000594047 TMEM256-PLSCR3K7ERE1 68 aa13.53□□□□□ -0.24
SYNM-204ENST00000594047 CTRLP40313 264 aa13.53□□□□□ -0.24
SYNM-204ENST00000594047 PRO3102Q9H379 93 aa13.53□□□□□ -0.24
SYNM-204ENST00000594047 SPG11Q96JI7 2443 aa13.53□□□□□ -0.24
SYNM-204ENST00000594047 BPY2O14599 106 aa13.52□□□□□ -0.25
SYNM-204ENST00000594047 KIR2DL5BQ8NHK3 375 aa13.52□□□□□ -0.25
SYNM-204ENST00000594047 IL15RAQ13261 267 aa13.52□□□□□ -0.25
SYNM-204ENST00000594047 WFDC2Q14508 124 aa13.51□□□□□ -0.25
SYNM-204ENST00000594047 CIRBP-AS1Q8TBR5 109 aa13.51□□□□□ -0.25
SYNM-204ENST00000594047 LYPD6Q86Y78 171 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms