RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 RAB4BP61018 213 aa7.05□□□□□ -1.28
SDF2-208ENST00000589788 LELP1Q5T871 98 aa7.05□□□□□ -1.28
SDF2-208ENST00000589788 AP1S3Q96PC3 154 aa7.05□□□□□ -1.28
SDF2-208ENST00000589788 MSRB1Q9NZV6 116 aa7.05□□□□□ -1.28
SDF2-208ENST00000589788 TRBV10-1A0A0K0K1A3 114 aa7.04□□□□□ -1.28
SDF2-208ENST00000589788 A0A1B0GVY2 172 aa7.04□□□□□ -1.28
SDF2-208ENST00000589788 MT-ND6P03923 174 aa7.04□□□□□ -1.28
SDF2-208ENST00000589788 RPL36AP83881 106 aaKnown RBP7.04□□□□□ -1.28
SDF2-208ENST00000589788 C10orf126Q8N4M7 172 aa7.04□□□□□ -1.28
SDF2-208ENST00000589788 RPL36ALQ969Q0 106 aaKnown RBP7.04□□□□□ -1.28
SDF2-208ENST00000589788 GNB1LQ9BYB4 327 aa7.04□□□□□ -1.28
SDF2-208ENST00000589788 TMEM191AQ9H0A3 160 aa7.04□□□□□ -1.28
SDF2-208ENST00000589788 Q9UF83 564 aa7.04□□□□□ -1.28
SDF2-208ENST00000589788 DNAH6Q9C0G6 4158 aa7.04□□□□□ -1.28
SDF2-208ENST00000589788 HLA-DQA1P01909 254 aa7.03□□□□□ -1.28
SDF2-208ENST00000589788 LINC00694P0DN24 101 aa7.03□□□□□ -1.28
SDF2-208ENST00000589788 RAB5AP20339 215 aa7.03□□□□□ -1.28
SDF2-208ENST00000589788 TMEM136Q6ZRR5 245 aa7.03□□□□□ -1.28
SDF2-208ENST00000589788 SMIM15Q7Z3B0 74 aa7.03□□□□□ -1.28
SDF2-208ENST00000589788 NFE4Q86UQ8 179 aa7.03□□□□□ -1.28
SDF2-208ENST00000589788 TRBV7-3A0A075B6L6 115 aa7.02□□□□□ -1.28
SDF2-208ENST00000589788 MGPP08493 103 aa7.02□□□□□ -1.28
SDF2-208ENST00000589788 KRTAP10-2P60368 255 aa7.02□□□□□ -1.28
SDF2-208ENST00000589788 LINC01556Q5JQF7 62 aa7.02□□□□□ -1.28
SDF2-208ENST00000589788 DPH3P1Q9H4G8 78 aa7.02□□□□□ -1.28
SDF2-208ENST00000589788 KIF25-AS1Q9Y6Z4 181 aa7.02□□□□□ -1.28
SDF2-208ENST00000589788 IGHV3-30P01768 117 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 IGHV3-33P01772 117 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 IGHV3-30-3P0DP02 117 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 IGHV3-30-5P0DP03 117 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 RPS10P46783 165 aaKnown RBP7.01□□□□□ -1.29
SDF2-208ENST00000589788 FAM104BQ5XKR9 115 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 DGAT2L7PQ6IED9 249 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.01□□□□□ -1.29
SDF2-208ENST00000589788 EPPK1P58107 5090 aaKnown RBP7.01□□□□□ -1.29
SDF2-208ENST00000589788 H7C1H1 209 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 UBE2D3P61077 147 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 SUMO2P61956 95 aaKnown RBP7.01□□□□□ -1.29
SDF2-208ENST00000589788 UBE2D2P62837 147 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 FOXI1Q12951 378 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 LCE4AQ5TA78 99 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 AMN1Q8IY45 258 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 NEXN-AS1Q8NBZ9 246 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 FRZBQ92765 325 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 TRAPPC1Q9Y5R8 145 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 TNFRSF18Q9Y5U5 241 aa7.01□□□□□ -1.29
SDF2-208ENST00000589788 APCSP02743 223 aa7□□□□□ -1.29
SDF2-208ENST00000589788 RAB4AP20338 218 aa7□□□□□ -1.29
SDF2-208ENST00000589788 Q6ZRN7 208 aaPredicted RBP7□□□□□ -1.29
SDF2-208ENST00000589788 RNF185Q96GF1 192 aa7□□□□□ -1.29
SDF2-208ENST00000589788 IBA57-AS1B1ANH7 110 aa6.99□□□□□ -1.29
SDF2-208ENST00000589788 FABP9Q0Z7S8 132 aa6.99□□□□□ -1.29
SDF2-208ENST00000589788 MRPL51Q4U2R6 128 aaKnown RBP6.99□□□□□ -1.29
SDF2-208ENST00000589788 MRAP2Q96G30 205 aa6.99□□□□□ -1.29
SDF2-208ENST00000589788 Q9HAA7 133 aa6.99□□□□□ -1.29
SDF2-208ENST00000589788 A0A087WX48 190 aa6.98□□□□□ -1.29
SDF2-208ENST00000589788 KRTAP9-7A8MTY7 169 aa6.98□□□□□ -1.29
SDF2-208ENST00000589788 C16orf90A8MZG2 172 aa6.98□□□□□ -1.29
SDF2-208ENST00000589788 PHOX2AO14813 284 aa6.98□□□□□ -1.29
SDF2-208ENST00000589788 PSCAO43653 123 aa6.98□□□□□ -1.29
SDF2-208ENST00000589788 PPBPP02775 128 aa6.98□□□□□ -1.29
SDF2-208ENST00000589788 TRGC2P03986 189 aa6.98□□□□□ -1.29
SDF2-208ENST00000589788 SUMO4Q6EEV6 95 aa6.98□□□□□ -1.29
SDF2-208ENST00000589788 SPATA12Q7Z6I5 190 aa6.98□□□□□ -1.29
SDF2-208ENST00000589788 DNAH10Q8IVF4 4471 aa6.97□□□□□ -1.29
SDF2-208ENST00000589788 TRBV6-8A0A0A6YYG3 113 aa6.97□□□□□ -1.29
SDF2-208ENST00000589788 M0QY20 66 aa6.97□□□□□ -1.29
SDF2-208ENST00000589788 CKS2P33552 79 aa6.97□□□□□ -1.29
SDF2-208ENST00000589788 LAGE3Q14657 143 aa6.97□□□□□ -1.29
SDF2-208ENST00000589788 TMEM97Q5BJF2 176 aa6.97□□□□□ -1.29
SDF2-208ENST00000589788 DAZ4Q86SG3 579 aaKnown RBP6.97□□□□□ -1.29
SDF2-208ENST00000589788 NIT1Q86X76 327 aa6.97□□□□□ -1.29
SDF2-208ENST00000589788 ORMDL3Q8N138 153 aa6.97□□□□□ -1.29
SDF2-208ENST00000589788 DNAJC30Q96LL9 226 aa6.97□□□□□ -1.29
SDF2-208ENST00000589788 DAZ3Q9NR90 486 aaKnown RBP6.97□□□□□ -1.29
SDF2-208ENST00000589788 FRAS1Q86XX4 4008 aa6.96□□□□□ -1.3
SDF2-208ENST00000589788 TRAV26-2A0A0B4J265 109 aa6.96□□□□□ -1.3
SDF2-208ENST00000589788 D6R8Y8 96 aa6.96□□□□□ -1.3
SDF2-208ENST00000589788 TMEM262E9PQX1 116 aa6.96□□□□□ -1.3
SDF2-208ENST00000589788 NPSP0C0P6 89 aa6.96□□□□□ -1.3
SDF2-208ENST00000589788 KIAA1644Q3SXP7 199 aa6.96□□□□□ -1.3
SDF2-208ENST00000589788 CHCHD5Q9BSY4 110 aa6.96□□□□□ -1.3
SDF2-208ENST00000589788 CHCHD7Q9BUK0 85 aa6.96□□□□□ -1.3
SDF2-208ENST00000589788 LAMTOR2Q9Y2Q5 125 aa6.96□□□□□ -1.3
SDF2-208ENST00000589788 TRAV8-3A0A0A6YYJ7 113 aa6.95□□□□□ -1.3
SDF2-208ENST00000589788 C1orf196B1AJZ1 125 aa6.95□□□□□ -1.3
SDF2-208ENST00000589788 SMKR1H3BMG3 65 aa6.95□□□□□ -1.3
SDF2-208ENST00000589788 NCR2O95944 276 aa6.95□□□□□ -1.3
SDF2-208ENST00000589788 PPP1R17O96001 155 aa6.95□□□□□ -1.3
SDF2-208ENST00000589788 PKIAP61925 76 aa6.95□□□□□ -1.3
SDF2-208ENST00000589788 LCE1DQ5T752 114 aa6.95□□□□□ -1.3
SDF2-208ENST00000589788 NRACQ8N912 160 aa6.95□□□□□ -1.3
SDF2-208ENST00000589788 PRELID3AQ96N28 172 aa6.95□□□□□ -1.3
SDF2-208ENST00000589788 ALKBH7Q9BT30 221 aaPredicted RBP6.95□□□□□ -1.3
SDF2-208ENST00000589788 TM2D2Q9BX73 214 aa6.95□□□□□ -1.3
SDF2-208ENST00000589788 NIT2Q9NQR4 276 aa6.95□□□□□ -1.3
SDF2-208ENST00000589788 TRBV25-1A0A075B6N4 114 aa6.94□□□□□ -1.3
SDF2-208ENST00000589788 A0A087WTM6 91 aa6.94□□□□□ -1.3
SDF2-208ENST00000589788 GAS8-AS1O95177 125 aa6.94□□□□□ -1.3
SDF2-208ENST00000589788 RMI2Q96E14 147 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms