RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 C7orf77A4D0Y5 90 aa10.54□□□□□ -0.72
NCLN-203ENST00000587740 EREGO14944 169 aa10.54□□□□□ -0.72
NCLN-203ENST00000587740 APOC3P02656 99 aa10.54□□□□□ -0.72
NCLN-203ENST00000587740 HAMPP81172 84 aa10.54□□□□□ -0.72
NCLN-203ENST00000587740 RHEBQ15382 184 aa10.54□□□□□ -0.72
NCLN-203ENST00000587740 FAM104BQ5XKR9 115 aa10.54□□□□□ -0.72
NCLN-203ENST00000587740 C10orf126Q8N4M7 172 aa10.54□□□□□ -0.72
NCLN-203ENST00000587740 BTF3L4Q96K17 158 aa10.54□□□□□ -0.72
NCLN-203ENST00000587740 TMEM242Q9NWH2 141 aa10.54□□□□□ -0.72
NCLN-203ENST00000587740 IGHV3-30P01768 117 aa10.53□□□□□ -0.72
NCLN-203ENST00000587740 IGHV3-33P01772 117 aa10.53□□□□□ -0.72
NCLN-203ENST00000587740 IGHV3-30-3P0DP02 117 aa10.53□□□□□ -0.72
NCLN-203ENST00000587740 IGHV3-30-5P0DP03 117 aa10.53□□□□□ -0.72
NCLN-203ENST00000587740 RPS10P5Q9NQ39 176 aa10.53□□□□□ -0.72
NCLN-203ENST00000587740 URGCP-MRPS24S4R325 110 aa10.53□□□□□ -0.72
NCLN-203ENST00000587740 TRBV25-1A0A075B6N4 114 aa10.52□□□□□ -0.73
NCLN-203ENST00000587740 S100PP25815 95 aa10.52□□□□□ -0.73
NCLN-203ENST00000587740 MRPL51Q4U2R6 128 aaKnown RBP10.52□□□□□ -0.73
NCLN-203ENST00000587740 NTM-AS1Q6ZSK4 140 aa10.52□□□□□ -0.73
NCLN-203ENST00000587740 ST20Q9HBF5 79 aa10.52□□□□□ -0.73
NCLN-203ENST00000587740 IGHV1-24A0A0C4DH33 117 aa10.51□□□□□ -0.73
NCLN-203ENST00000587740 TRBV6-5A0A0K0K1A5 114 aa10.51□□□□□ -0.73
NCLN-203ENST00000587740 SDHAF1A6NFY7 115 aa10.51□□□□□ -0.73
NCLN-203ENST00000587740 TMEM262E9PQX1 116 aa10.51□□□□□ -0.73
NCLN-203ENST00000587740 SMKR1H3BMG3 65 aa10.51□□□□□ -0.73
NCLN-203ENST00000587740 GAS8-AS1O95177 125 aa10.51□□□□□ -0.73
NCLN-203ENST00000587740 NCR2O95944 276 aa10.51□□□□□ -0.73
NCLN-203ENST00000587740 PPP1R17O96001 155 aa10.51□□□□□ -0.73
NCLN-203ENST00000587740 COTL1Q14019 142 aa10.51□□□□□ -0.73
NCLN-203ENST00000587740 NIT1Q86X76 327 aa10.51□□□□□ -0.73
NCLN-203ENST00000587740 SVBPQ8N300 66 aa10.51□□□□□ -0.73
NCLN-203ENST00000587740 TRAV9-1A0A075B6T8 112 aa10.5□□□□□ -0.73
NCLN-203ENST00000587740 A0A087WX48 190 aa10.5□□□□□ -0.73
NCLN-203ENST00000587740 SNAPINO95295 136 aa10.5□□□□□ -0.73
NCLN-203ENST00000587740 CKS2P33552 79 aa10.5□□□□□ -0.73
NCLN-203ENST00000587740 SLC7A5P1Q8MH63 180 aa10.5□□□□□ -0.73
NCLN-203ENST00000587740 CHCHD5Q9BSY4 110 aa10.5□□□□□ -0.73
NCLN-203ENST00000587740 FAM229AH3BQW9 127 aa10.49□□□□□ -0.73
NCLN-203ENST00000587740 J3QL48 77 aa10.49□□□□□ -0.73
NCLN-203ENST00000587740 PMCHP20382 165 aa10.49□□□□□ -0.73
NCLN-203ENST00000587740 GCSHP23434 173 aa10.49□□□□□ -0.73
NCLN-203ENST00000587740 RPS10P46783 165 aaKnown RBP10.49□□□□□ -0.73
NCLN-203ENST00000587740 PKIAP61925 76 aa10.49□□□□□ -0.73
NCLN-203ENST00000587740 IQCJQ1A5X6 159 aa10.49□□□□□ -0.73
NCLN-203ENST00000587740 DEFB104AQ8WTQ1 72 aa10.49□□□□□ -0.73
NCLN-203ENST00000587740 CHCHD7Q9BUK0 85 aa10.49□□□□□ -0.73
NCLN-203ENST00000587740 IBA57-AS1B1ANH7 110 aa10.48□□□□□ -0.73
NCLN-203ENST00000587740 I3L3M4 83 aa10.48□□□□□ -0.73
NCLN-203ENST00000587740 NFE4Q86UQ8 179 aa10.48□□□□□ -0.73
NCLN-203ENST00000587740 Q8N3U1 123 aa10.48□□□□□ -0.73
NCLN-203ENST00000587740 TMEM243Q9BU79 118 aa10.48□□□□□ -0.73
NCLN-203ENST00000587740 TMEM70Q9BUB7 260 aa10.48□□□□□ -0.73
NCLN-203ENST00000587740 DNAH8Q96JB1 4490 aa10.47□□□□□ -0.73
NCLN-203ENST00000587740 D6R8Y8 96 aa10.47□□□□□ -0.73
NCLN-203ENST00000587740 PPBPP02775 128 aa10.47□□□□□ -0.73
NCLN-203ENST00000587740 AMTP48728 403 aa10.47□□□□□ -0.73
NCLN-203ENST00000587740 POLR2KP53803 58 aaKnown RBP10.47□□□□□ -0.73
NCLN-203ENST00000587740 NRACQ8N912 160 aa10.47□□□□□ -0.73
NCLN-203ENST00000587740 UBE2L6O14933 153 aa10.46□□□□□ -0.73
NCLN-203ENST00000587740 SUMO2P61956 95 aaKnown RBP10.46□□□□□ -0.73
NCLN-203ENST00000587740 GAGE6Q13070 117 aa10.46□□□□□ -0.73
NCLN-203ENST00000587740 ELOBQ15370 118 aa10.46□□□□□ -0.73
NCLN-203ENST00000587740 TRBV24-1A0A075B6N3 115 aa10.45□□□□□ -0.74
NCLN-203ENST00000587740 VCYO14598 125 aa10.45□□□□□ -0.74
NCLN-203ENST00000587740 TNFRSF6BO95407 300 aa10.45□□□□□ -0.74
NCLN-203ENST00000587740 APCSP02743 223 aa10.45□□□□□ -0.74
NCLN-203ENST00000587740 LAGE3Q14657 143 aa10.45□□□□□ -0.74
NCLN-203ENST00000587740 MPV17L2Q567V2 206 aa10.45□□□□□ -0.74
NCLN-203ENST00000587740 ATRAIDQ6UW56 229 aa10.45□□□□□ -0.74
NCLN-203ENST00000587740 TMEM136Q6ZRR5 245 aa10.45□□□□□ -0.74
NCLN-203ENST00000587740 ORMDL3Q8N138 153 aa10.45□□□□□ -0.74
NCLN-203ENST00000587740 C20orf78Q9BR46 151 aa10.45□□□□□ -0.74
NCLN-203ENST00000587740 UBR4Q5T4S7 5183 aa10.45□□□□□ -0.74
NCLN-203ENST00000587740 TRBV27A0A0K0K1C4 114 aa10.44□□□□□ -0.74
NCLN-203ENST00000587740 Q9HAA7 133 aa10.44□□□□□ -0.74
NCLN-203ENST00000587740 KLK12Q9UKR0 248 aa10.44□□□□□ -0.74
NCLN-203ENST00000587740 HMCN2Q8NDA2 5059 aa10.43□□□□□ -0.74
NCLN-203ENST00000587740 PHOX2AO14813 284 aa10.43□□□□□ -0.74
NCLN-203ENST00000587740 NPYP01303 97 aa10.43□□□□□ -0.74
NCLN-203ENST00000587740 COX19Q49B96 90 aa10.43□□□□□ -0.74
NCLN-203ENST00000587740 PRELID3AQ96N28 172 aa10.43□□□□□ -0.74
NCLN-203ENST00000587740 KIR2DL4Q99706 377 aa10.43□□□□□ -0.74
NCLN-203ENST00000587740 TRAV8-3A0A0A6YYJ7 113 aa10.42□□□□□ -0.74
NCLN-203ENST00000587740 KRTAP29-1A8MX34 341 aaPredicted RBP10.42□□□□□ -0.74
NCLN-203ENST00000587740 TSHBP01222 138 aa10.42□□□□□ -0.74
NCLN-203ENST00000587740 ANGP03950 147 aaKnown RBP10.42□□□□□ -0.74
NCLN-203ENST00000587740 FCER1GP30273 86 aa10.42□□□□□ -0.74
NCLN-203ENST00000587740 RBX1P62877 108 aa10.42□□□□□ -0.74
NCLN-203ENST00000587740 Q8N976 141 aa10.42□□□□□ -0.74
NCLN-203ENST00000587740 FAM30AQ9NZY2 134 aa10.42□□□□□ -0.74
NCLN-203ENST00000587740 LRP1Q07954 4544 aaKnown RBP10.41□□□□□ -0.74
NCLN-203ENST00000587740 HLA-DQA1P01909 254 aa10.41□□□□□ -0.74
NCLN-203ENST00000587740 RPL32P62910 135 aaKnown RBP10.41□□□□□ -0.74
NCLN-203ENST00000587740 Q0VG73 95 aa10.41□□□□□ -0.74
NCLN-203ENST00000587740 UBE2WQ96B02 151 aa10.41□□□□□ -0.74
NCLN-203ENST00000587740 GNB1LQ9BYB4 327 aa10.41□□□□□ -0.74
NCLN-203ENST00000587740 LAMTOR2Q9Y2Q5 125 aa10.41□□□□□ -0.74
NCLN-203ENST00000587740 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.4□□□□□ -0.74
NCLN-203ENST00000587740 A0A1B0GUV1 79 aa10.4□□□□□ -0.74
NCLN-203ENST00000587740 IGKV2-29A2NJV5 120 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms