RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 GCN1Q92616 2671 aaKnown RBP10.31□□□□□ -0.76
CACNA1A-209ENST00000587525 IGSF10Q6WRI0 2623 aa10.31□□□□□ -0.76
CACNA1A-209ENST00000587525 GAGE6Q13070 117 aa10.31□□□□□ -0.76
CACNA1A-209ENST00000587525 CHCHD5Q9BSY4 110 aa10.31□□□□□ -0.76
CACNA1A-209ENST00000587525 GAGE7O76087 117 aa10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 CFC1BP0CG36 223 aa10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 CFC1P0CG37 223 aa10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 GAGE12FP0CL80 117 aa10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 GAGE12GP0CL81 117 aa10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 GAGE12IP0CL82 117 aa10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 TAL2Q16559 108 aa10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 NFE4Q86UQ8 179 aa10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 TMEM61Q8N0U2 210 aa10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 ZNF580Q9UK33 172 aa10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 TRGV11A0A075B6L2 103 aa10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 TRBV6-1A0A0K0K1D8 114 aa10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 IGHG2P01859 326 aa10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 RNASE3P12724 160 aaKnown RBP10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 PAPPA-AS1Q5QFB9 102 aa10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 COL27A1Q8IZC6 1860 aaPredicted RBP10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 CRIP2P52943 208 aaPredicted RBP10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 FBN2P35556 2912 aa10.3□□□□□ -0.76
CACNA1A-209ENST00000587525 TRGV4A0A0C4DH28 118 aa10.29□□□□□ -0.76
CACNA1A-209ENST00000587525 CFAP161Q6P656 301 aa10.29□□□□□ -0.76
CACNA1A-209ENST00000587525 NDUFA11Q86Y39 141 aa10.29□□□□□ -0.76
CACNA1A-209ENST00000587525 NDUFA12Q9UI09 145 aa10.29□□□□□ -0.76
CACNA1A-209ENST00000587525 U3KQK5 164 aa10.29□□□□□ -0.76
CACNA1A-209ENST00000587525 ATXN8Q156A1 80 aa10.29□□□□□ -0.76
CACNA1A-209ENST00000587525 TEP1Q99973 2627 aaKnown RBP10.29□□□□□ -0.76
CACNA1A-209ENST00000587525 CIRBPQ14011 172 aaKnown RBP10.29□□□□□ -0.76
CACNA1A-209ENST00000587525 EBI3Q14213 229 aa10.29□□□□□ -0.76
CACNA1A-209ENST00000587525 H3BMM0 161 aa10.28□□□□□ -0.76
CACNA1A-209ENST00000587525 I3L3M4 83 aa10.28□□□□□ -0.76
CACNA1A-209ENST00000587525 IFITM1P13164 125 aa10.28□□□□□ -0.76
CACNA1A-209ENST00000587525 UBE2WQ96B02 151 aa10.28□□□□□ -0.76
CACNA1A-209ENST00000587525 HRNRQ86YZ3 2850 aaPredicted RBP10.28□□□□□ -0.76
CACNA1A-209ENST00000587525 PRIMA1Q86XR5 153 aa10.28□□□□□ -0.76
CACNA1A-209ENST00000587525 U3KQE9 123 aa10.28□□□□□ -0.76
CACNA1A-209ENST00000587525 PFN2P35080 140 aa10.27□□□□□ -0.76
CACNA1A-209ENST00000587525 CARD19Q96LW7 228 aa10.27□□□□□ -0.76
CACNA1A-209ENST00000587525 MORN3Q6PF18 240 aaPredicted RBP10.27□□□□□ -0.77
CACNA1A-209ENST00000587525 TOMM6Q96B49 74 aa10.27□□□□□ -0.77
CACNA1A-209ENST00000587525 TRAV4A0A0B4J268 109 aa10.27□□□□□ -0.77
CACNA1A-209ENST00000587525 Q6ZSV7 163 aa10.27□□□□□ -0.77
CACNA1A-209ENST00000587525 HELZ2Q9BYK8 2649 aaKnown RBP10.27□□□□□ -0.77
CACNA1A-209ENST00000587525 SCGB1A1P11684 91 aa10.26□□□□□ -0.77
CACNA1A-209ENST00000587525 HERV-K104P63124 156 aa10.26□□□□□ -0.77
CACNA1A-209ENST00000587525 PEMTQ9UBM1 199 aa10.26□□□□□ -0.77
CACNA1A-209ENST00000587525 MRPL23Q16540 153 aaKnown RBP10.26□□□□□ -0.77
CACNA1A-209ENST00000587525 MRPL53Q96EL3 112 aaKnown RBP10.26□□□□□ -0.77
CACNA1A-209ENST00000587525 A6NDX4 124 aa10.26□□□□□ -0.77
CACNA1A-209ENST00000587525 LINC00158P58513 81 aa10.26□□□□□ -0.77
CACNA1A-209ENST00000587525 PF4P02776 101 aa10.25□□□□□ -0.77
CACNA1A-209ENST00000587525 EDA2RQ9HAV5 297 aa10.25□□□□□ -0.77
CACNA1A-209ENST00000587525 TRBV7-3A0A075B6L6 115 aa10.25□□□□□ -0.77
CACNA1A-209ENST00000587525 ZNF415Q09FC8 603 aa10.25□□□□□ -0.77
CACNA1A-209ENST00000587525 NOP10Q9NPE3 64 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-209ENST00000587525 GAGE2AQ6NT46 116 aa10.25□□□□□ -0.77
CACNA1A-209ENST00000587525 PIFOQ8TCI5 191 aa10.25□□□□□ -0.77
CACNA1A-209ENST00000587525 TRBV7-9A0A0J9YWB2 115 aa10.24□□□□□ -0.77
CACNA1A-209ENST00000587525 KRTAP10-9P60411 292 aa10.24□□□□□ -0.77
CACNA1A-209ENST00000587525 CFAP126Q5VTH2 177 aa10.24□□□□□ -0.77
CACNA1A-209ENST00000587525 Q9UF83 564 aa10.24□□□□□ -0.77
CACNA1A-209ENST00000587525 A0A0J9YX75 114 aa10.24□□□□□ -0.77
CACNA1A-209ENST00000587525 CCDC179H3BU77 68 aa10.24□□□□□ -0.77
CACNA1A-209ENST00000587525 LINC01620Q4KN68 170 aa10.24□□□□□ -0.77
CACNA1A-209ENST00000587525 NEXN-AS1Q8NBZ9 246 aa10.24□□□□□ -0.77
CACNA1A-209ENST00000587525 A0A0J9YY99 117 aa10.24□□□□□ -0.77
CACNA1A-209ENST00000587525 DEFB4AO15263 64 aa10.24□□□□□ -0.77
CACNA1A-209ENST00000587525 DNAL4O96015 105 aa10.23□□□□□ -0.77
CACNA1A-209ENST00000587525 WFDC10AQ9H1F0 79 aa10.23□□□□□ -0.77
CACNA1A-209ENST00000587525 UBR5O95071 2799 aaPredicted RBP10.23□□□□□ -0.77
CACNA1A-209ENST00000587525 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.23□□□□□ -0.77
CACNA1A-209ENST00000587525 NXPH4O95158 308 aa10.23□□□□□ -0.77
CACNA1A-209ENST00000587525 VPREB3Q9UKI3 123 aa10.23□□□□□ -0.77
CACNA1A-209ENST00000587525 TMEM141Q96I45 108 aa10.22□□□□□ -0.77
CACNA1A-209ENST00000587525 GPHB5Q86YW7 130 aa10.22□□□□□ -0.77
CACNA1A-209ENST00000587525 SPATA25Q9BR10 227 aa10.22□□□□□ -0.77
CACNA1A-209ENST00000587525 MGAM2Q2M2H8 2515 aa10.22□□□□□ -0.77
CACNA1A-209ENST00000587525 LINC01619G3V211 115 aa10.22□□□□□ -0.77
CACNA1A-209ENST00000587525 INSP01308 110 aa10.22□□□□□ -0.77
CACNA1A-209ENST00000587525 LENEPQ9Y5L5 61 aa10.22□□□□□ -0.77
CACNA1A-209ENST00000587525 NDUFA7O95182 113 aa10.21□□□□□ -0.77
CACNA1A-209ENST00000587525 RPL36AP83881 106 aaKnown RBP10.21□□□□□ -0.77
CACNA1A-209ENST00000587525 RPL36ALQ969Q0 106 aaKnown RBP10.21□□□□□ -0.77
CACNA1A-209ENST00000587525 C9orf153Q5TBE3 101 aa10.21□□□□□ -0.77
CACNA1A-209ENST00000587525 TMEM101Q96IK0 257 aa10.21□□□□□ -0.77
CACNA1A-209ENST00000587525 TSPEAR-AS2P59090 65 aa10.21□□□□□ -0.78
CACNA1A-209ENST00000587525 Q9H8V8 135 aa10.21□□□□□ -0.78
CACNA1A-209ENST00000587525 SMCPP49901 116 aaPredicted RBP10.2□□□□□ -0.78
CACNA1A-209ENST00000587525 PAX4O43316 350 aa10.2□□□□□ -0.78
CACNA1A-209ENST00000587525 CRLF1O75462 422 aa10.2□□□□□ -0.78
CACNA1A-209ENST00000587525 C5orf38Q86SI9 138 aa10.2□□□□□ -0.78
CACNA1A-209ENST00000587525 TRAV12-1A0A0B4J245 112 aa10.19□□□□□ -0.78
CACNA1A-209ENST00000587525 FAM236AA0A1B0GUQ0 79 aa10.19□□□□□ -0.78
CACNA1A-209ENST00000587525 FAM236BA0A1B0GV22 79 aa10.19□□□□□ -0.78
CACNA1A-209ENST00000587525 IGHV3-30-3P0DP02 117 aa10.19□□□□□ -0.78
CACNA1A-209ENST00000587525 HIST1H4AP62805 103 aaKnown RBP10.19□□□□□ -0.78
CACNA1A-209ENST00000587525 CDIP1Q9H305 208 aa10.19□□□□□ -0.78
CACNA1A-209ENST00000587525 NDUFV3P56181 108 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms