RNA–Protein interactions for RNA: ENST00000587257.1

LRFN3-203, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 529 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-203ENST00000587257 PRR3P79522 188 aaKnown RBP9.24□□□□□ -0.93
LRFN3-203ENST00000587257 FAM74A3Q4VXF1 159 aa9.24□□□□□ -0.93
LRFN3-203ENST00000587257 TMEM97Q5BJF2 176 aa9.24□□□□□ -0.93
LRFN3-203ENST00000587257 FAM231DQ6ZW35 169 aa9.24□□□□□ -0.93
LRFN3-203ENST00000587257 TMSB15BA0A087X1C1 80 aa9.23□□□□□ -0.93
LRFN3-203ENST00000587257 RAB19A4D1S5 217 aa9.23□□□□□ -0.93
LRFN3-203ENST00000587257 FOXA3P55318 350 aaPredicted RBP9.23□□□□□ -0.93
LRFN3-203ENST00000587257 RPS20P60866 119 aaKnown RBP9.23□□□□□ -0.93
LRFN3-203ENST00000587257 GAGE6Q13070 117 aa9.23□□□□□ -0.93
LRFN3-203ENST00000587257 CNFNQ9BYD5 112 aa9.23□□□□□ -0.93
LRFN3-203ENST00000587257 SRP19P09132 144 aaKnown RBP9.22□□□□□ -0.93
LRFN3-203ENST00000587257 IGLC6P0CF74 106 aa9.22□□□□□ -0.93
LRFN3-203ENST00000587257 REG3AQ06141 175 aa9.22□□□□□ -0.93
LRFN3-203ENST00000587257 PRR27Q6MZM9 219 aa9.22□□□□□ -0.93
LRFN3-203ENST00000587257 REG3GQ6UW15 175 aa9.22□□□□□ -0.93
LRFN3-203ENST00000587257 NTM-AS1Q6ZSK4 140 aa9.22□□□□□ -0.93
LRFN3-203ENST00000587257 OCC1Q8TAD7 63 aa9.22□□□□□ -0.93
LRFN3-203ENST00000587257 GTSF1Q8WW33 167 aa9.22□□□□□ -0.93
LRFN3-203ENST00000587257 TRBV25-1A0A075B6N4 114 aa9.21□□□□□ -0.94
LRFN3-203ENST00000587257 SLPIP03973 132 aa9.21□□□□□ -0.94
LRFN3-203ENST00000587257 KRTAP10-8P60410 259 aa9.21□□□□□ -0.94
LRFN3-203ENST00000587257 CT83Q5H943 113 aa9.21□□□□□ -0.94
LRFN3-203ENST00000587257 EIF5A2Q9GZV4 153 aaKnown RBP9.21□□□□□ -0.94
LRFN3-203ENST00000587257 TRAV8-4A0A0B4J246 113 aa9.2□□□□□ -0.94
LRFN3-203ENST00000587257 XKRY2A2RUG3 117 aa9.2□□□□□ -0.94
LRFN3-203ENST00000587257 FAM231BA6NCW3 169 aa9.2□□□□□ -0.94
LRFN3-203ENST00000587257 F2Z2F3 143 aa9.2□□□□□ -0.94
LRFN3-203ENST00000587257 K7EN84 100 aa9.2□□□□□ -0.94
LRFN3-203ENST00000587257 P01737 135 aa9.2□□□□□ -0.94
LRFN3-203ENST00000587257 PEA15Q15121 130 aa9.19□□□□□ -0.94
LRFN3-203ENST00000587257 CLLU1Q5K131 121 aa9.19□□□□□ -0.94
LRFN3-203ENST00000587257 NUDT10Q8NFP7 164 aa9.19□□□□□ -0.94
LRFN3-203ENST00000587257 NUDT11Q96G61 164 aa9.19□□□□□ -0.94
LRFN3-203ENST00000587257 F5H697 171 aa9.18□□□□□ -0.94
LRFN3-203ENST00000587257 GZMBP10144 247 aa9.18□□□□□ -0.94
LRFN3-203ENST00000587257 COX6A2Q02221 97 aa9.18□□□□□ -0.94
LRFN3-203ENST00000587257 IQCJQ1A5X6 159 aa9.18□□□□□ -0.94
LRFN3-203ENST00000587257 MAJINQ3KP22 176 aa9.18□□□□□ -0.94
LRFN3-203ENST00000587257 SPINK6Q6UWN8 80 aa9.18□□□□□ -0.94
LRFN3-203ENST00000587257 LINC01551Q86U37 167 aa9.18□□□□□ -0.94
LRFN3-203ENST00000587257 IGHV1-24A0A0C4DH33 117 aa9.17□□□□□ -0.94
LRFN3-203ENST00000587257 IGKV2-24A0A0C4DH68 120 aa9.17□□□□□ -0.94
LRFN3-203ENST00000587257 IFITM2Q01629 132 aa9.17□□□□□ -0.94
LRFN3-203ENST00000587257 OR10AG1Q8NH19 301 aa9.17□□□□□ -0.94
LRFN3-203ENST00000587257 C9JQL5 133 aa9.16□□□□□ -0.94
LRFN3-203ENST00000587257 CTRLP40313 264 aa9.16□□□□□ -0.94
LRFN3-203ENST00000587257 CACNG7P62955 275 aa9.16□□□□□ -0.94
LRFN3-203ENST00000587257 STPG4Q8N801 248 aa9.16□□□□□ -0.94
LRFN3-203ENST00000587257 C20orf203Q8NBC4 194 aa9.16□□□□□ -0.94
LRFN3-203ENST00000587257 OR2D3Q8NGH3 330 aa9.16□□□□□ -0.94
LRFN3-203ENST00000587257 SMIM7Q9BQ49 75 aa9.16□□□□□ -0.94
LRFN3-203ENST00000587257 GFRA4Q9GZZ7 299 aa9.16□□□□□ -0.94
LRFN3-203ENST00000587257 OSTCQ9NRP0 149 aa9.16□□□□□ -0.94
LRFN3-203ENST00000587257 ZNF727A8MUV8 499 aa9.15□□□□□ -0.94
LRFN3-203ENST00000587257 RPS10P46783 165 aaKnown RBP9.15□□□□□ -0.94
LRFN3-203ENST00000587257 RAB14P61106 215 aa9.15□□□□□ -0.94
LRFN3-203ENST00000587257 TMEM241Q24JQ0 296 aa9.15□□□□□ -0.94
LRFN3-203ENST00000587257 RPP21Q9H633 154 aaKnown RBP9.15□□□□□ -0.94
LRFN3-203ENST00000587257 SRSF3P84103 164 aaKnown RBP9.14□□□□□ -0.95
LRFN3-203ENST00000587257 SPANXN1Q5VSR9 72 aa9.14□□□□□ -0.95
LRFN3-203ENST00000587257 CFAP161Q6P656 301 aa9.14□□□□□ -0.95
LRFN3-203ENST00000587257 FER1L6-AS1Q8NA97 138 aa9.14□□□□□ -0.95
LRFN3-203ENST00000587257 PRSS3P2Q8NHM4 247 aa9.14□□□□□ -0.95
LRFN3-203ENST00000587257 IGLV4-60A0A075B6I1 120 aa9.13□□□□□ -0.95
LRFN3-203ENST00000587257 MUC21A0A0G2JKD1 596 aa9.13□□□□□ -0.95
LRFN3-203ENST00000587257 A0A1B0GUV1 79 aa9.13□□□□□ -0.95
LRFN3-203ENST00000587257 A8MWL6 223 aa9.13□□□□□ -0.95
LRFN3-203ENST00000587257 SMIM17P0DL12 118 aa9.13□□□□□ -0.95
LRFN3-203ENST00000587257 C15orf56Q8N910 161 aa9.13□□□□□ -0.95
LRFN3-203ENST00000587257 TMEM243Q9BU79 118 aa9.13□□□□□ -0.95
LRFN3-203ENST00000587257 NAT8Q9UHE5 227 aa9.13□□□□□ -0.95
LRFN3-203ENST00000587257 MUC21A0A140T8X8 626 aa9.12□□□□□ -0.95
LRFN3-203ENST00000587257 UQCC3Q6UW78 93 aa9.12□□□□□ -0.95
LRFN3-203ENST00000587257 TSKUQ8WUA8 353 aa9.12□□□□□ -0.95
LRFN3-203ENST00000587257 AP1S3Q96PC3 154 aa9.12□□□□□ -0.95
LRFN3-203ENST00000587257 RNASE7Q9H1E1 156 aaKnown RBP9.12□□□□□ -0.95
LRFN3-203ENST00000587257 RPL23P62829 140 aaKnown RBP9.11□□□□□ -0.95
LRFN3-203ENST00000587257 HIGD2BQ4VC39 106 aa9.11□□□□□ -0.95
LRFN3-203ENST00000587257 LYZL1Q6UWQ5 148 aa9.11□□□□□ -0.95
LRFN3-203ENST00000587257 ISOC2Q96AB3 205 aa9.11□□□□□ -0.95
LRFN3-203ENST00000587257 LINC00474Q9P2X8 69 aa9.11□□□□□ -0.95
LRFN3-203ENST00000587257 A0A096LNI7 61 aa9.1□□□□□ -0.95
LRFN3-203ENST00000587257 GAGE12HA6NDE8 117 aa9.1□□□□□ -0.95
LRFN3-203ENST00000587257 SRSF9Q13242 221 aaKnown RBP eCLIP9.1□□□□□ -0.95
LRFN3-203ENST00000587257 Q6ZRP5 223 aa9.1□□□□□ -0.95
LRFN3-203ENST00000587257 V9GYV3 84 aa9.1□□□□□ -0.95
LRFN3-203ENST00000587257 H7C1H1 209 aa9.09□□□□□ -0.95
LRFN3-203ENST00000587257 M0QY20 66 aa9.09□□□□□ -0.95
LRFN3-203ENST00000587257 GATCO43716 136 aaKnown RBP9.09□□□□□ -0.95
LRFN3-203ENST00000587257 NTF3P20783 257 aa9.09□□□□□ -0.95
LRFN3-203ENST00000587257 SSTP61278 116 aa9.09□□□□□ -0.95
LRFN3-203ENST00000587257 PNRC1Q12796 327 aaPredicted RBP9.09□□□□□ -0.95
LRFN3-203ENST00000587257 KRTAP9-2Q9BYQ4 174 aa9.09□□□□□ -0.95
LRFN3-203ENST00000587257 PKIGQ9Y2B9 76 aa9.09□□□□□ -0.95
LRFN3-203ENST00000587257 LPAP08519 4548 aa9.08□□□□□ -0.96
LRFN3-203ENST00000587257 UBE2L6O14933 153 aa9.08□□□□□ -0.96
LRFN3-203ENST00000587257 TRGC1P0CF51 173 aa9.08□□□□□ -0.96
LRFN3-203ENST00000587257 GVQW2A0A096LPI5 108 aaPredicted RBP9.07□□□□□ -0.96
LRFN3-203ENST00000587257 MGPP08493 103 aa9.07□□□□□ -0.96
LRFN3-203ENST00000587257 IGKV3OR2-268A0A0C4DH90 116 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms