RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 FAM222AQ5U5X8 452 aa9.68□□□□□ -0.86
DNMT1-207ENST00000586588 DPH3Q96FX2 82 aa9.68□□□□□ -0.86
DNMT1-207ENST00000586588 TRAV41A0A0B4J266 112 aa9.67□□□□□ -0.86
DNMT1-207ENST00000586588 hADV29S1A0JD25 119 aa9.67□□□□□ -0.86
DNMT1-207ENST00000586588 TINCRA0A1B0GVN0 87 aa9.67□□□□□ -0.86
DNMT1-207ENST00000586588 DEFB1P60022 68 aa9.67□□□□□ -0.86
DNMT1-207ENST00000586588 NPC2P61916 151 aa9.67□□□□□ -0.86
DNMT1-207ENST00000586588 BEAN1Q3B7T3 259 aa9.67□□□□□ -0.86
DNMT1-207ENST00000586588 FAM74A4Q5TZK3 123 aa9.67□□□□□ -0.86
DNMT1-207ENST00000586588 C9orf85Q96MD7 179 aa9.67□□□□□ -0.86
DNMT1-207ENST00000586588 CACNA1AO00555 2505 aa9.66□□□□□ -0.86
DNMT1-207ENST00000586588 PRRC2AP48634 2157 aaKnown RBP9.66□□□□□ -0.86
DNMT1-207ENST00000586588 CD28P10747 220 aa9.66□□□□□ -0.86
DNMT1-207ENST00000586588 FAM104AQ969W3 186 aa9.66□□□□□ -0.86
DNMT1-207ENST00000586588 NBASA2RRP1 2371 aa9.66□□□□□ -0.86
DNMT1-207ENST00000586588 F6UB75 175 aa9.66□□□□□ -0.86
DNMT1-207ENST00000586588 TIRAPP58753 221 aa9.66□□□□□ -0.86
DNMT1-207ENST00000586588 RPL18AQ02543 176 aaKnown RBP9.66□□□□□ -0.86
DNMT1-207ENST00000586588 G3V318 75 aa9.65□□□□□ -0.86
DNMT1-207ENST00000586588 BAALC-AS2P0C853 105 aa9.65□□□□□ -0.86
DNMT1-207ENST00000586588 POLEQ07864 2286 aa9.65□□□□□ -0.86
DNMT1-207ENST00000586588 C22orf24Q9Y442 160 aa9.64□□□□□ -0.87
DNMT1-207ENST00000586588 CIRBPQ14011 172 aaKnown RBP9.64□□□□□ -0.87
DNMT1-207ENST00000586588 SERP2Q8N6R1 65 aa9.64□□□□□ -0.87
DNMT1-207ENST00000586588 IGHV3OR16-10A0A075B7F0 116 aa9.63□□□□□ -0.87
DNMT1-207ENST00000586588 IGHV3-16A0A0C4DH30 117 aa9.63□□□□□ -0.87
DNMT1-207ENST00000586588 FAM223BA6NKX1 122 aa9.63□□□□□ -0.87
DNMT1-207ENST00000586588 NDUFA4O00483 81 aa9.63□□□□□ -0.87
DNMT1-207ENST00000586588 NDUFA1O15239 70 aa9.63□□□□□ -0.87
DNMT1-207ENST00000586588 FAM223AQ8IWN6 122 aa9.63□□□□□ -0.87
DNMT1-207ENST00000586588 COPS9Q8WXC6 57 aa9.63□□□□□ -0.87
DNMT1-207ENST00000586588 UPK3BQ9BT76 320 aa9.63□□□□□ -0.87
DNMT1-207ENST00000586588 CYSTM1Q9H1C7 97 aa9.62□□□□□ -0.87
DNMT1-207ENST00000586588 UCNP55089 124 aa9.62□□□□□ -0.87
DNMT1-207ENST00000586588 LINC00308Q8TCZ7 52 aa9.62□□□□□ -0.87
DNMT1-207ENST00000586588 TRAV12-3A0A0B4J271 114 aa9.62□□□□□ -0.87
DNMT1-207ENST00000586588 UNQ9165/PRO28630Q6UXU0 137 aa9.62□□□□□ -0.87
DNMT1-207ENST00000586588 TPRP12270 2363 aaKnown RBP9.61□□□□□ -0.87
DNMT1-207ENST00000586588 A8MZ25 164 aa9.61□□□□□ -0.87
DNMT1-207ENST00000586588 ABCA4P78363 2273 aa9.61□□□□□ -0.87
DNMT1-207ENST00000586588 KIR2DL5BQ8NHK3 375 aa9.61□□□□□ -0.87
DNMT1-207ENST00000586588 PKD1L2Q7Z442 2459 aa9.61□□□□□ -0.87
DNMT1-207ENST00000586588 COL6A6A6NMZ7 2263 aa9.6□□□□□ -0.87
DNMT1-207ENST00000586588 ZNF415Q09FC8 603 aa9.6□□□□□ -0.87
DNMT1-207ENST00000586588 CDSNQ15517 529 aa9.59□□□□□ -0.87
DNMT1-207ENST00000586588 Q6JHZ5 121 aa9.59□□□□□ -0.87
DNMT1-207ENST00000586588 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.59□□□□□ -0.87
DNMT1-207ENST00000586588 F5H768 121 aa9.59□□□□□ -0.87
DNMT1-207ENST00000586588 MRAPQ8TCY5 172 aa9.59□□□□□ -0.87
DNMT1-207ENST00000586588 Q5XG85 94 aa9.58□□□□□ -0.88
DNMT1-207ENST00000586588 OXTP01178 125 aa9.58□□□□□ -0.88
DNMT1-207ENST00000586588 MALP21145 153 aa9.58□□□□□ -0.88
DNMT1-207ENST00000586588 C19orf54Q5BKX5 351 aa9.58□□□□□ -0.88
DNMT1-207ENST00000586588 Q8N2B8 174 aa9.58□□□□□ -0.88
DNMT1-207ENST00000586588 IGLV5-45A0A087WSX0 123 aa9.57□□□□□ -0.88
DNMT1-207ENST00000586588 KLRB1Q12918 225 aa9.57□□□□□ -0.88
DNMT1-207ENST00000586588 DCHS2Q6V1P9 2916 aa9.57□□□□□ -0.88
DNMT1-207ENST00000586588 GRNP28799 593 aaKnown RBP9.57□□□□□ -0.88
DNMT1-207ENST00000586588 TRAV13-1A0A0B4J241 112 aa9.57□□□□□ -0.88
DNMT1-207ENST00000586588 C4orf26Q17RF5 130 aa9.56□□□□□ -0.88
DNMT1-207ENST00000586588 PRIMA1Q86XR5 153 aa9.56□□□□□ -0.88
DNMT1-207ENST00000586588 UBE2D4Q9Y2X8 147 aa9.56□□□□□ -0.88
DNMT1-207ENST00000586588 C5orf56Q8N8D9 126 aa9.56□□□□□ -0.88
DNMT1-207ENST00000586588 FAM218AQ96MZ4 157 aa9.56□□□□□ -0.88
DNMT1-207ENST00000586588 DSCR8Q96T75 97 aa9.56□□□□□ -0.88
DNMT1-207ENST00000586588 SIRPDQ9H106 197 aa9.56□□□□□ -0.88
DNMT1-207ENST00000586588 PRORYQ9H606 182 aa9.56□□□□□ -0.88
DNMT1-207ENST00000586588 DNAL4O96015 105 aa9.55□□□□□ -0.88
DNMT1-207ENST00000586588 RNASE13Q5GAN3 156 aaKnown RBP9.55□□□□□ -0.88
DNMT1-207ENST00000586588 RHPN1-AS1Q9BWJ2 59 aa9.55□□□□□ -0.88
DNMT1-207ENST00000586588 LRBAP50851 2863 aa9.55□□□□□ -0.88
DNMT1-207ENST00000586588 TRBV12-3P01733 135 aa9.55□□□□□ -0.88
DNMT1-207ENST00000586588 OVOL2Q9BRP0 275 aa9.55□□□□□ -0.88
DNMT1-207ENST00000586588 CDKN2A-AS1Q9UH64 79 aa9.55□□□□□ -0.88
DNMT1-207ENST00000586588 HRNRQ86YZ3 2850 aaPredicted RBP9.55□□□□□ -0.88
DNMT1-207ENST00000586588 IGHV1OR15-1A0A075B7D0 117 aa9.54□□□□□ -0.88
DNMT1-207ENST00000586588 IGHG2P01859 326 aa9.54□□□□□ -0.88
DNMT1-207ENST00000586588 IGLV5-39A0A0G2JS06 123 aa9.54□□□□□ -0.88
DNMT1-207ENST00000586588 NDUFC2-KCTD14E9PQ53 114 aa9.54□□□□□ -0.88
DNMT1-207ENST00000586588 ADORA2A-AS1P86434 159 aa9.54□□□□□ -0.88
DNMT1-207ENST00000586588 IGKV3-7A0A075B6H7 116 aa9.54□□□□□ -0.88
DNMT1-207ENST00000586588 USP17L23D6RBM5 183 aa9.54□□□□□ -0.88
DNMT1-207ENST00000586588 PF4P02776 101 aa9.54□□□□□ -0.88
DNMT1-207ENST00000586588 HIST2H2BCQ6DN03 193 aa9.54□□□□□ -0.88
DNMT1-207ENST00000586588 HIST2H2BDQ6DRA6 164 aa9.54□□□□□ -0.88
DNMT1-207ENST00000586588 SOSTDC1Q6X4U4 206 aa9.54□□□□□ -0.88
DNMT1-207ENST00000586588 CHCHD7Q9BUK0 85 aa9.54□□□□□ -0.88
DNMT1-207ENST00000586588 LY6HO94772 140 aa9.53□□□□□ -0.88
DNMT1-207ENST00000586588 Q9H8V8 135 aa9.53□□□□□ -0.88
DNMT1-207ENST00000586588 HIVEP3Q5T1R4 2406 aa9.53□□□□□ -0.88
DNMT1-207ENST00000586588 ANKHD1Q8IWZ3 2542 aaKnown RBP9.53□□□□□ -0.88
DNMT1-207ENST00000586588 HRCT1Q6UXD1 115 aa9.53□□□□□ -0.88
DNMT1-207ENST00000586588 OBSCN-AS1Q96MR7 158 aa9.53□□□□□ -0.88
DNMT1-207ENST00000586588 CFAP46Q8IYW2 2715 aa9.53□□□□□ -0.88
DNMT1-207ENST00000586588 CCL21O00585 134 aa9.52□□□□□ -0.88
DNMT1-207ENST00000586588 RPL28P46779 137 aaKnown RBP9.52□□□□□ -0.88
DNMT1-207ENST00000586588 SYNJ2BPP57105 145 aa9.52□□□□□ -0.88
DNMT1-207ENST00000586588 LINC01561Q8N1V8 128 aa9.52□□□□□ -0.88
DNMT1-207ENST00000586588 USMG5Q96IX5 58 aa9.52□□□□□ -0.89
DNMT1-207ENST00000586588 LINC01560Q8TB33 94 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms